RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 BRPF1P55201 1214 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 LRRC27Q9C0I9 530 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 ANKRD18BA2A2Z9 1011 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 NF2P35240 595 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 MAP9Q49MG5 647 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 CCDC178Q5BJE1 867 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 SREK1Q8WXA9 508 aaKnown RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 NUTM2BA6NNL0 878 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 NUTM2EB1AL46 878 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 SRGAP3O43295 1099 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 CCDC172P0C7W6 258 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 TTLL5Q6EMB2 1281 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 IQCA1Q86XH1 822 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 NUTM2AQ8IVF1 878 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 GTPBP4Q9BZE4 634 aaKnown RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 TAX1BP1Q86VP1 789 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 WDR63Q8IWG1 891 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 DDX54Q8TDD1 881 aaKnown RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 PIBF1Q8WXW3 757 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 SPATA32Q96LK8 384 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 SH2B1Q9NRF2 756 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 COMMD10Q9Y6G5 202 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 RPAP2Q8IXW5 612 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 FANCIQ9NVI1 1328 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 BAG3O95817 575 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 SLC5A1P13866 664 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 SFPQP23246 707 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 CDK19Q9BWU1 502 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 UPF3BQ9BZI7 483 aaKnown RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 LARP1BQ659C4 914 aaKnown RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 BBXQ8WY36 941 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 TROQ12816 1431 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 IDH1O75874 414 aaKnown RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 SSR1P43307 286 aaKnown RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 TTF1Q15361 905 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 APBB1IPQ7Z5R6 666 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 GSTTP1A0A1W2PQM5 241 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 ZSCAN12O43309 604 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 FKBP4Q02790 459 aaKnown RBP eCLIP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 EHBP1Q8NDI1 1231 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 HOMER2Q9NSB8 354 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 NCAPD3P42695 1498 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 GSTO1P78417 241 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 IFIT5Q13325 482 aaKnown RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 SULT6B1Q6IMI4 303 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 CCDC148Q8NFR7 591 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 ALS2CR12Q96Q35 445 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 CDC5LQ99459 802 aaKnown RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 NAPBQ9H115 298 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 WIZO95785 1651 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 BTBD11A6QL63 1104 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 GLRX3O76003 335 aaKnown RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 BMP15O95972 392 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 POLR3DP05423 398 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 USP5P45974 858 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 METTL24Q5JXM2 366 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 FAM114A1Q8IWE2 563 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 LUZP1Q86V48 1076 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 CCDC83Q8IWF9 413 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 PANK1Q8TE04 598 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 CABP5Q9NP86 173 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 CCDC61Q9Y6R9 512 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 TTC21BQ7Z4L5 1316 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 GCOM1H8Y6P7 765 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-201ENST00000283254 MYZAPP0CAP1 466 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 FERP16591 822 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 PDE4BQ07343 736 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 TSNARE1Q96NA8 513 aa4.73□□□□□ -1.65
SCN3A-201ENST00000283254 BAG4O95429 457 aaKnown RBP4.72□□□□□ -1.65
SCN3A-201ENST00000283254 GOLIM4O00461 696 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 RAB11FIP3O75154 756 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 WDR78Q5VTH9 848 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 CCDC96Q2M329 555 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 KIAA1328Q86T90 577 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 RBM27Q9P2N5 1060 aaKnown RBP4.72□□□□□ -1.65
SCN3A-201ENST00000283254 LRRC9Q6ZRR7 1453 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 CTNNA2P26232 953 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 AMPD3Q01432 767 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 CENPHQ9H3R5 247 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 MKNK2Q9HBH9 465 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 PDCL2Q8N4E4 241 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 CRACR2AQ9BSW2 395 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 NSD2O96028 1365 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 IGF1RP08069 1367 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 AFAP1Q8N556 730 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 PDRG1Q9NUG6 133 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 ABCF2Q9UG63 623 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 KIAA1107Q9UPP5 1409 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 GNAT3A8MTJ3 354 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 CCDC82Q8N4S0 544 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 ZGPATQ8N5A5 531 aaKnown RBP4.72□□□□□ -1.65
SCN3A-201ENST00000283254 NUP62CLQ9H1M0 184 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 HYPKQ9NX55 129 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 LRRFIP2Q9Y608 721 aaKnown RBP4.72□□□□□ -1.65
SCN3A-201ENST00000283254 SPATA24Q86W54 205 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 KIAA1524Q8TCG1 905 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 NGLY1Q96IV0 654 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 SIL1Q9H173 461 aa4.72□□□□□ -1.65
SCN3A-201ENST00000283254 TBCAO75347 108 aaKnown RBP4.71□□□□□ -1.65
SCN3A-201ENST00000283254 NOP2P46087 812 aaKnown RBP4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms