RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 SKILP12757 684 aa12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 HDGFL1Q5TGJ6 251 aa12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 NUTM2GQ5VZR2 741 aa12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 STAG1Q8WVM7 1258 aa12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 ZNF232Q9UNY5 417 aa12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 RTEL1-TNFRSF6BF6WH68 1400 aa12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 TROQ12816 1431 aaPredicted RBP12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 PRG4Q92954 1404 aaPredicted RBP12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 IVLP07476 585 aa12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 USP8P40818 1118 aa12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 CCDC186Q7Z3E2 898 aa12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 SLC24A3Q9HC58 644 aa12.59□□□□□ -0.39
ERGIC3-201ENST00000279052 PKD2Q13563 968 aa12.58□□□□□ -0.4
ERGIC3-201ENST00000279052 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.58□□□□□ -0.4
ERGIC3-201ENST00000279052 PZPP20742 1482 aa12.58□□□□□ -0.4
ERGIC3-201ENST00000279052 PSMD2Q13200 908 aa12.58□□□□□ -0.4
ERGIC3-201ENST00000279052 CCDC112Q8NEF3 446 aa12.58□□□□□ -0.4
ERGIC3-201ENST00000279052 ATL2Q8NHH9 583 aa12.58□□□□□ -0.4
ERGIC3-201ENST00000279052 ZNF428Q96B54 188 aa12.58□□□□□ -0.4
ERGIC3-201ENST00000279052 CAMSAP2Q08AD1 1489 aa12.58□□□□□ -0.4
ERGIC3-201ENST00000279052 USP47Q96K76 1375 aa12.58□□□□□ -0.4
ERGIC3-201ENST00000279052 PRPF38AQ8NAV1 312 aaKnown RBP12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 THOC1Q96FV9 657 aaKnown RBP12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 AK7Q96M32 723 aa12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 EIF3CLB5ME19 914 aaKnown RBP12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 U2SURPO15042 1029 aaKnown RBP12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 ECEL1O95672 775 aa12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 ZRSR1Q15695 479 aaKnown RBP12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 TEX11Q8IYF3 940 aa12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 EIF3CQ99613 913 aaKnown RBP12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 MYBL2P10244 700 aa12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 PDCD2Q16342 344 aaPredicted RBP12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 RANBP17Q9H2T7 1088 aaKnown RBP12.57□□□□□ -0.4
ERGIC3-201ENST00000279052 PTPRCP08575 1304 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 MNAT1P51948 309 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 RNF20Q5VTR2 975 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 SMARCE1Q969G3 411 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 GOPCQ9HD26 462 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 PHF8Q9UPP1 1060 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 IL16Q14005 1332 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 TPD52L2O43399 206 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 TBC1D8BQ0IIM8 1120 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 FBXO38Q6PIJ6 1188 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 GTF3C6Q969F1 213 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 VEZTQ9HBM0 779 aa12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 SPATS2LQ9NUQ6 558 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 EIF3AQ14152 1382 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-201ENST00000279052 SGSM2O43147 1006 aa12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 SSFA2P28290 1259 aa12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 NAA30Q147X3 362 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 AMOTQ4VCS5 1084 aa12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 RPUSD2Q8IZ73 545 aaKnown RBP12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 NECTIN2Q92692 538 aa12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 CHCHD3Q9NX63 227 aaKnown RBP12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 ZNF396Q96N95 335 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 TMX4Q9H1E5 349 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 ZSCAN16Q9H4T2 348 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 GNL3LQ9NVN8 582 aaKnown RBP12.55□□□□□ -0.4
ERGIC3-201ENST00000279052 POLR1AO95602 1720 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 GPATCH8Q9UKJ3 1502 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 DHX29Q7Z478 1369 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 CORO7P57737 925 aa12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 ICA1Q05084 483 aa12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 CHMP7Q8WUX9 453 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 TRIM6Q9C030 488 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 RMI1Q9H9A7 625 aa12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 LMBRD1Q9NUN5 540 aa12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 PAX3P23760 479 aa12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 NAP1L1P55209 391 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 RBBP5Q15291 538 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 PSD3Q9NYI0 1048 aa12.54□□□□□ -0.4
ERGIC3-201ENST00000279052 PLEKHH1Q9ULM0 1364 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 SYCE3A1L190 88 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 ELF1P32519 619 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 RPS6KA3P51812 740 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 GRIK3Q13003 919 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 MFSD4BQ5TF39 518 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 LEKR1Q6ZMV7 388 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 NFXL1Q6ZNB6 911 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 NUTM1Q86Y26 1132 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 EFCAB13Q8IY85 973 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 PCDHGA4Q9Y5G9 962 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 ITSN2Q9NZM3 1697 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 MCTP1Q6DN14 999 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 TTLL5Q6EMB2 1281 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 GBP6Q6ZN66 633 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 ZNF483Q8TF39 744 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 TSPY26PQ9H489 355 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 PLB1Q6P1J6 1458 aa12.53□□□□□ -0.4
ERGIC3-201ENST00000279052 ACTN2P35609 894 aa12.52□□□□□ -0.4
ERGIC3-201ENST00000279052 FBLN2P98095 1184 aa12.52□□□□□ -0.4
ERGIC3-201ENST00000279052 CCDC30Q5VVM6 783 aa12.52□□□□□ -0.4
ERGIC3-201ENST00000279052 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.4
ERGIC3-201ENST00000279052 TBC1D2BQ9UPU7 963 aa12.52□□□□□ -0.4
ERGIC3-201ENST00000279052 MBD5Q9P267 1494 aa12.52□□□□□ -0.4
ERGIC3-201ENST00000279052 ANKRD50Q9ULJ7 1429 aa12.52□□□□□ -0.4
ERGIC3-201ENST00000279052 GCFC2P16383 781 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms