RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 COL22A1Q8NFW1 1626 aaPredicted RBP15□□□□□ -0.01
SSRP1-201ENST00000278412 OVOS2A0A0G2JMS6 1433 aa15□□□□□ -0.01
SSRP1-201ENST00000278412 IGHDP01880 384 aa15□□□□□ -0.01
SSRP1-201ENST00000278412 CT47B1P0C2W7 299 aaPredicted RBP15□□□□□ -0.01
SSRP1-201ENST00000278412 HSPA1LP34931 641 aa14.99□□□□□ -0.01
SSRP1-201ENST00000278412 PIP4K2AP48426 406 aaPredicted RBP14.99□□□□□ -0.01
SSRP1-201ENST00000278412 EIF4A1P60842 406 aaKnown RBP14.99□□□□□ -0.01
SSRP1-201ENST00000278412 IL2RBP14784 551 aa14.99□□□□□ -0.01
SSRP1-201ENST00000278412 ALDH1L2Q3SY69 923 aa14.99□□□□□ -0.01
SSRP1-201ENST00000278412 C1orf115Q9H7X2 142 aa14.99□□□□□ -0.01
SSRP1-201ENST00000278412 SPG7Q9UQ90 795 aa14.99□□□□□ -0.01
SSRP1-201ENST00000278412 ZCRB1Q8TBF4 217 aaKnown RBP14.98□□□□□ -0.01
SSRP1-201ENST00000278412 C8orf37Q96NL8 207 aa14.98□□□□□ -0.01
SSRP1-201ENST00000278412 IFNL2Q8IZJ0 200 aa14.98□□□□□ -0.01
SSRP1-201ENST00000278412 ABCC6O95255 1503 aa14.98□□□□□ -0.01
SSRP1-201ENST00000278412 MVPQ14764 893 aaKnown RBP14.98□□□□□ -0.01
SSRP1-201ENST00000278412 SHANK3Q9BYB0 1731 aa14.97□□□□□ -0.01
SSRP1-201ENST00000278412 PHAXQ9H814 394 aaKnown RBP14.97□□□□□ -0.01
SSRP1-201ENST00000278412 TSHZ2Q9NRE2 1034 aa14.97□□□□□ -0.01
SSRP1-201ENST00000278412 PLCH1Q4KWH8 1693 aa14.97□□□□□ -0.01
SSRP1-201ENST00000278412 PKD1L3Q7Z443 1732 aa14.97□□□□□ -0.01
SSRP1-201ENST00000278412 PROSER3Q2NL68 480 aa14.97□□□□□ -0.01
SSRP1-201ENST00000278412 RGS12O14924 1447 aa14.97□□□□□ -0.01
SSRP1-201ENST00000278412 KDM3BQ7LBC6 1761 aa14.96□□□□□ -0.01
SSRP1-201ENST00000278412 SLC52A2Q9HAB3 445 aa14.96□□□□□ -0.01
SSRP1-201ENST00000278412 SCN11AQ9UI33 1791 aa14.96□□□□□ -0.01
SSRP1-201ENST00000278412 COL14A1Q05707 1796 aaKnown RBP14.96□□□□□ -0.02
SSRP1-201ENST00000278412 KIF16BQ96L93 1317 aa14.95□□□□□ -0.02
SSRP1-201ENST00000278412 CCDC9Q9Y3X0 531 aaKnown RBP14.95□□□□□ -0.02
SSRP1-201ENST00000278412 SIPA1L3O60292 1781 aaPredicted RBP14.95□□□□□ -0.02
SSRP1-201ENST00000278412 LRP6O75581 1613 aa14.95□□□□□ -0.02
SSRP1-201ENST00000278412 CHPF2Q9P2E5 772 aa14.95□□□□□ -0.02
SSRP1-201ENST00000278412 HDGFL1Q5TGJ6 251 aa14.94□□□□□ -0.02
SSRP1-201ENST00000278412 ZNF496Q96IT1 587 aaPredicted RBP14.94□□□□□ -0.02
SSRP1-201ENST00000278412 ADAMTS7Q9UKP4 1686 aa14.93□□□□□ -0.02
SSRP1-201ENST00000278412 KDM2BQ8NHM5 1336 aa14.93□□□□□ -0.02
SSRP1-201ENST00000278412 SLC4A10Q6U841 1118 aa14.93□□□□□ -0.02
SSRP1-201ENST00000278412 ERICH6Q7L0X2 663 aa14.93□□□□□ -0.02
SSRP1-201ENST00000278412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.93□□□□□ -0.027e-7■■□□□ 13.4
SSRP1-201ENST00000278412 ZNF790Q6PG37 636 aa14.93□□□□□ -0.02
SSRP1-201ENST00000278412 DCAF5Q96JK2 942 aa14.93□□□□□ -0.02
SSRP1-201ENST00000278412 PARP4Q9UKK3 1724 aaKnown RBP14.92□□□□□ -0.02
SSRP1-201ENST00000278412 GIGYF1O75420 1035 aaPredicted RBP14.92□□□□□ -0.02
SSRP1-201ENST00000278412 CABP4P57796 275 aa14.92□□□□□ -0.02
SSRP1-201ENST00000278412 NGLY1Q96IV0 654 aa14.92□□□□□ -0.02
SSRP1-201ENST00000278412 PCDH11XQ9BZA7 1347 aa14.92□□□□□ -0.02
SSRP1-201ENST00000278412 PCDH11YQ9BZA8 1340 aa14.92□□□□□ -0.02
SSRP1-201ENST00000278412 BRPF1P55201 1214 aaPredicted RBP14.92□□□□□ -0.02
SSRP1-201ENST00000278412 TOGARAM1Q9Y4F4 1720 aa14.91□□□□□ -0.02
SSRP1-201ENST00000278412 ABCC4O15439 1325 aa14.91□□□□□ -0.02
SSRP1-201ENST00000278412 NRAPQ86VF7 1730 aa14.91□□□□□ -0.02
SSRP1-201ENST00000278412 A0A0G2JS52 829 aa14.91□□□□□ -0.02
SSRP1-201ENST00000278412 IPO8O15397 1037 aaKnown RBP14.91□□□□□ -0.02
SSRP1-201ENST00000278412 PTCD1O75127 700 aaKnown RBP14.91□□□□□ -0.02
SSRP1-201ENST00000278412 FAM182BQ5T319 152 aa14.91□□□□□ -0.02
SSRP1-201ENST00000278412 USP16Q9Y5T5 823 aa14.91□□□□□ -0.02
SSRP1-201ENST00000278412 SPATA31A1Q5TZJ5 1347 aa14.91□□□□□ -0.02
SSRP1-201ENST00000278412 C5P01031 1676 aa14.9□□□□□ -0.02
SSRP1-201ENST00000278412 FLIIQ13045 1269 aa14.9□□□□□ -0.02
SSRP1-201ENST00000278412 DISP2A7MBM2 1401 aa14.9□□□□□ -0.02
SSRP1-201ENST00000278412 FKBP5Q13451 457 aaPredicted RBP14.89□□□□□ -0.03
SSRP1-201ENST00000278412 FAM98CQ17RN3 349 aaKnown RBP14.89□□□□□ -0.03
SSRP1-201ENST00000278412 ZBTB7BO15156 539 aaPredicted RBP14.89□□□□□ -0.03
SSRP1-201ENST00000278412 ZBTB40Q9NUA8 1239 aa14.89□□□□□ -0.03
SSRP1-201ENST00000278412 BCL9LQ86UU0 1499 aa14.89□□□□□ -0.03
SSRP1-201ENST00000278412 JCADQ9P266 1359 aa14.89□□□□□ -0.03
SSRP1-201ENST00000278412 CCDC30Q5VVM6 783 aa14.88□□□□□ -0.03
SSRP1-201ENST00000278412 SYTL4Q96C24 671 aaPredicted RBP14.88□□□□□ -0.03
SSRP1-201ENST00000278412 STK31Q9BXU1 1019 aa14.88□□□□□ -0.03
SSRP1-201ENST00000278412 SLIT2O94813 1529 aa14.88□□□□□ -0.03
SSRP1-201ENST00000278412 ACSBG1Q96GR2 724 aa14.88□□□□□ -0.03
SSRP1-201ENST00000278412 ASAP1Q9ULH1 1129 aa14.88□□□□□ -0.03
SSRP1-201ENST00000278412 HEG1Q9ULI3 1381 aa14.88□□□□□ -0.03
SSRP1-201ENST00000278412 MYL6BP14649 208 aa14.88□□□□□ -0.03
SSRP1-201ENST00000278412 MEIS3Q99687 375 aa14.88□□□□□ -0.03
SSRP1-201ENST00000278412 AIMP1Q12904 312 aaKnown RBP14.87□□□□□ -0.03
SSRP1-201ENST00000278412 PTF1AQ7RTS3 328 aa14.87□□□□□ -0.03
SSRP1-201ENST00000278412 PIGBQ92521 554 aa14.87□□□□□ -0.03
SSRP1-201ENST00000278412 ARHGAP45Q92619 1136 aa14.87□□□□□ -0.03
SSRP1-201ENST00000278412 DDX19BQ9UMR2 479 aa14.87□□□□□ -0.03
SSRP1-201ENST00000278412 SPATA31A5Q5VU36 1347 aa14.87□□□□□ -0.03
SSRP1-201ENST00000278412 SPATA31A7Q8IWB4 1347 aa14.87□□□□□ -0.03
SSRP1-201ENST00000278412 RGS3P49796 1198 aa14.86□□□□□ -0.03
SSRP1-201ENST00000278412 PDIA6Q15084 440 aa14.86□□□□□ -0.03
SSRP1-201ENST00000278412 MRC1P22897 1456 aa14.86□□□□□ -0.03
SSRP1-201ENST00000278412 SIRT2Q8IXJ6 389 aa14.86□□□□□ -0.03
SSRP1-201ENST00000278412 MARCH10Q8NA82 808 aaPredicted RBP14.86□□□□□ -0.03
SSRP1-201ENST00000278412 BABAM1Q9NWV8 329 aa14.86□□□□□ -0.03
SSRP1-201ENST00000278412 API5Q9BZZ5 524 aaKnown RBP14.85□□□□□ -0.03
SSRP1-201ENST00000278412 GLI3P10071 1580 aa14.85□□□□□ -0.03
SSRP1-201ENST00000278412 EXOC5O00471 708 aa14.85□□□□□ -0.03
SSRP1-201ENST00000278412 NKX1-1Q15270 411 aaPredicted RBP14.85□□□□□ -0.03
SSRP1-201ENST00000278412 UNC5CLQ8IV45 518 aa14.85□□□□□ -0.03
SSRP1-201ENST00000278412 TTC5Q8N0Z6 440 aa14.84□□□□□ -0.03
SSRP1-201ENST00000278412 PI4KAP2A4QPH2 592 aa14.84□□□□□ -0.03
SSRP1-201ENST00000278412 PRIM1P49642 420 aaKnown RBP14.84□□□□□ -0.03
SSRP1-201ENST00000278412 PI4KAP1Q8N8J0 262 aa14.84□□□□□ -0.03
SSRP1-201ENST00000278412 KCNQ2O43526 872 aa14.83□□□□□ -0.04
SSRP1-201ENST00000278412 USP21Q9UK80 565 aa14.83□□□□□ -0.04
SSRP1-201ENST00000278412 HSP90AB1P08238 724 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms