RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 ITSN1Q15811 1721 aa9.3□□□□□ -0.92
TRIM6-201ENST00000278302 IBTKQ9P2D0 1353 aaPredicted RBP9.3□□□□□ -0.92
TRIM6-201ENST00000278302 SYCE3A1L190 88 aa9.29□□□□□ -0.92
TRIM6-201ENST00000278302 K7ELQ4 463 aaPredicted RBP9.29□□□□□ -0.92
TRIM6-201ENST00000278302 PLEKHG3A1L390 1219 aa9.29□□□□□ -0.92
TRIM6-201ENST00000278302 KRT24Q2M2I5 525 aa9.29□□□□□ -0.92
TRIM6-201ENST00000278302 SIRT2Q8IXJ6 389 aa9.29□□□□□ -0.92
TRIM6-201ENST00000278302 CCDC39Q9UFE4 941 aa9.29□□□□□ -0.92
TRIM6-201ENST00000278302 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIM6-201ENST00000278302 PIK3R4Q99570 1358 aa9.29□□□□□ -0.92
TRIM6-201ENST00000278302 MON2Q7Z3U7 1717 aa9.29□□□□□ -0.92
TRIM6-201ENST00000278302 PRPF40AO75400 957 aaKnown RBP9.29□□□□□ -0.92
TRIM6-201ENST00000278302 U2AF2P26368 475 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIM6-201ENST00000278302 NGDNQ8NEJ9 315 aaKnown RBP9.29□□□□□ -0.92
TRIM6-201ENST00000278302 DLG5Q8TDM6 1919 aa9.29□□□□□ -0.92
TRIM6-201ENST00000278302 KNDC1Q76NI1 1749 aa9.28□□□□□ -0.92
TRIM6-201ENST00000278302 KIAA2012Q0VF49 1180 aa9.28□□□□□ -0.92
TRIM6-201ENST00000278302 RTF1Q92541 710 aaKnown RBP9.28□□□□□ -0.92
TRIM6-201ENST00000278302 LMBRD1Q9NUN5 540 aa9.28□□□□□ -0.92
TRIM6-201ENST00000278302 AMOTL2Q9Y2J4 779 aa9.28□□□□□ -0.92
TRIM6-201ENST00000278302 AKAP12Q02952 1782 aa9.28□□□□□ -0.92
TRIM6-201ENST00000278302 CHL1O00533 1208 aa9.27□□□□□ -0.92
TRIM6-201ENST00000278302 C3P01024 1663 aa9.27□□□□□ -0.92
TRIM6-201ENST00000278302 CDK11BP21127 795 aaKnown RBP9.27□□□□□ -0.92
TRIM6-201ENST00000278302 ADAMTS13Q76LX8 1427 aa9.27□□□□□ -0.92
TRIM6-201ENST00000278302 ZNF771Q7L3S4 317 aaPredicted RBP9.27□□□□□ -0.92
TRIM6-201ENST00000278302 GPT2Q8TD30 523 aa9.27□□□□□ -0.92
TRIM6-201ENST00000278302 NSFL1CQ9UNZ2 370 aaKnown RBP9.27□□□□□ -0.92
TRIM6-201ENST00000278302 AMPHP49418 695 aa9.27□□□□□ -0.93
TRIM6-201ENST00000278302 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
TRIM6-201ENST00000278302 FOXD4L4Q8WXT5 416 aaPredicted RBP9.27□□□□□ -0.93
TRIM6-201ENST00000278302 MIS18AQ9NYP9 233 aa9.27□□□□□ -0.93
TRIM6-201ENST00000278302 PLEKHG1Q9ULL1 1385 aa9.27□□□□□ -0.93
TRIM6-201ENST00000278302 MCM5P33992 734 aa9.27□□□□□ -0.93
TRIM6-201ENST00000278302 TMEM63CQ9P1W3 806 aa9.27□□□□□ -0.93
TRIM6-201ENST00000278302 INTS3Q68E01 1043 aaKnown RBP9.26□□□□□ -0.93
TRIM6-201ENST00000278302 TBC1D9Q6ZT07 1266 aa9.26□□□□□ -0.93
TRIM6-201ENST00000278302 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
TRIM6-201ENST00000278302 USP6P35125 1406 aa9.26□□□□□ -0.93
TRIM6-201ENST00000278302 UBR1Q8IWV7 1749 aa9.26□□□□□ -0.93
TRIM6-201ENST00000278302 APBB1O00213 710 aa9.26□□□□□ -0.93
TRIM6-201ENST00000278302 SLC4A2P04920 1241 aa9.26□□□□□ -0.93
TRIM6-201ENST00000278302 TAF7LQ5H9L4 462 aa9.26□□□□□ -0.93
TRIM6-201ENST00000278302 KIF3AQ9Y496 699 aa9.26□□□□□ -0.93
TRIM6-201ENST00000278302 PDCL2Q8N4E4 241 aa9.26□□□□□ -0.93
TRIM6-201ENST00000278302 CHMP4AQ9BY43 222 aa9.26□□□□□ -0.93
TRIM6-201ENST00000278302 TSPYL4Q9UJ04 414 aa9.26□□□□□ -0.93
TRIM6-201ENST00000278302 KIF24Q5T7B8 1368 aa9.25□□□□□ -0.93
TRIM6-201ENST00000278302 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.25□□□□□ -0.93
TRIM6-201ENST00000278302 FOXO3O43524 673 aa9.25□□□□□ -0.93
TRIM6-201ENST00000278302 CDC45O75419 566 aa9.25□□□□□ -0.93
TRIM6-201ENST00000278302 DCTPP1Q9H773 170 aa9.25□□□□□ -0.93
TRIM6-201ENST00000278302 MAP3K19Q56UN5 1328 aa9.25□□□□□ -0.93
TRIM6-201ENST00000278302 SLC4A10Q6U841 1118 aa9.25□□□□□ -0.93
TRIM6-201ENST00000278302 RPAP2Q8IXW5 612 aaPredicted RBP9.25□□□□□ -0.93
TRIM6-201ENST00000278302 TTC12Q9H892 705 aaPredicted RBP9.25□□□□□ -0.93
TRIM6-201ENST00000278302 OVOS2A0A0J9YW53 1432 aa9.25□□□□□ -0.93
TRIM6-201ENST00000278302 OVOS2Q6IE36 1432 aa9.25□□□□□ -0.93
TRIM6-201ENST00000278302 TTC21AQ8NDW8 1320 aa9.24□□□□□ -0.93
TRIM6-201ENST00000278302 MTHFSDQ2M296 383 aaKnown RBP9.24□□□□□ -0.93
TRIM6-201ENST00000278302 ANKRD44Q8N8A2 993 aa9.24□□□□□ -0.93
TRIM6-201ENST00000278302 KIF13AQ9H1H9 1805 aa9.24□□□□□ -0.93
TRIM6-201ENST00000278302 PTPRCP08575 1304 aa9.24□□□□□ -0.93
TRIM6-201ENST00000278302 NOLC1Q14978 699 aaKnown RBP eCLIP9.24□□□□□ -0.93
TRIM6-201ENST00000278302 LRSAM1Q6UWE0 723 aa9.24□□□□□ -0.93
TRIM6-201ENST00000278302 PLEKHM2Q8IWE5 1019 aa9.24□□□□□ -0.93
TRIM6-201ENST00000278302 C16orf71Q8IYS4 520 aaPredicted RBP9.24□□□□□ -0.93
TRIM6-201ENST00000278302 KIAA0232Q92628 1395 aa9.24□□□□□ -0.93
TRIM6-201ENST00000278302 NLRP6P59044 892 aa9.24□□□□□ -0.93
TRIM6-201ENST00000278302 PTPRUQ92729 1446 aa9.23□□□□□ -0.93
TRIM6-201ENST00000278302 KCNJ4P48050 445 aa9.23□□□□□ -0.93
TRIM6-201ENST00000278302 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
TRIM6-201ENST00000278302 CLEC17AQ6ZS10 378 aa9.23□□□□□ -0.93
TRIM6-201ENST00000278302 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
TRIM6-201ENST00000278302 TBX22Q9Y458 520 aa9.23□□□□□ -0.93
TRIM6-201ENST00000278302 TPRNQ4KMQ1 711 aa9.23□□□□□ -0.93
TRIM6-201ENST00000278302 CEP85Q6P2H3 762 aa9.23□□□□□ -0.93
TRIM6-201ENST00000278302 MEIS3Q99687 375 aa9.23□□□□□ -0.93
TRIM6-201ENST00000278302 USP31Q70CQ4 1352 aa9.23□□□□□ -0.93
TRIM6-201ENST00000278302 NRKQ7Z2Y5 1582 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 IRX5P78411 483 aaPredicted RBP9.22□□□□□ -0.93
TRIM6-201ENST00000278302 HMGN5P82970 282 aaKnown RBP9.22□□□□□ -0.93
TRIM6-201ENST00000278302 C14orf37Q86TY3 774 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 THEMISQ8N1K5 641 aaPredicted RBP9.22□□□□□ -0.93
TRIM6-201ENST00000278302 ZGPATQ8N5A5 531 aaKnown RBP9.22□□□□□ -0.93
TRIM6-201ENST00000278302 EYA1Q99502 592 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 STK31Q9BXU1 1019 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 ARHGEF10O15013 1369 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 FLT4P35916 1363 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 MSH6P52701 1360 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 SMARCA5O60264 1052 aaPredicted RBP9.22□□□□□ -0.93
TRIM6-201ENST00000278302 HMMRO75330 724 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 GSPT1P15170 499 aaKnown RBP9.22□□□□□ -0.93
TRIM6-201ENST00000278302 TTC22Q5TAA0 569 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 SBNO1A3KN83 1393 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 F6X3S4 739 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 CASC1Q6TDU7 716 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 CERS3Q8IU89 383 aa9.22□□□□□ -0.93
TRIM6-201ENST00000278302 LTV1Q96GA3 475 aaPredicted RBP9.22□□□□□ -0.93
TRIM6-201ENST00000278302 GTF2F1P35269 517 aaKnown RBP eCLIP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms