RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 KDM5DQ9BY66 1539 aa13.66□□□□□ -0.22
SKP2-202ENST00000274255 MPRIPQ6WCQ1 1025 aa13.66□□□□□ -0.22
SKP2-202ENST00000274255 CNTROBQ8N137 903 aa13.66□□□□□ -0.22
SKP2-202ENST00000274255 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
SKP2-202ENST00000274255 ZNF692Q9BU19 519 aaPredicted RBP13.65□□□□□ -0.22
SKP2-202ENST00000274255 SRCIN1Q9C0H9 1055 aa13.65□□□□□ -0.22
SKP2-202ENST00000274255 TOMM22Q9NS69 142 aa13.65□□□□□ -0.22
SKP2-202ENST00000274255 ATP6V1DQ9Y5K8 247 aa13.65□□□□□ -0.22
SKP2-202ENST00000274255 ABCC11Q96J66 1382 aa13.65□□□□□ -0.22
SKP2-202ENST00000274255 MSH6P52701 1360 aa13.65□□□□□ -0.22
SKP2-202ENST00000274255 GJB2P29033 226 aa13.65□□□□□ -0.22
SKP2-202ENST00000274255 PI4KAP2A4QPH2 592 aa13.65□□□□□ -0.23
SKP2-202ENST00000274255 PI4KAP1Q8N8J0 262 aa13.65□□□□□ -0.23
SKP2-202ENST00000274255 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
SKP2-202ENST00000274255 GPATCH3Q96I76 525 aa13.64□□□□□ -0.23
SKP2-202ENST00000274255 TNMDQ9H2S6 317 aa13.64□□□□□ -0.23
SKP2-202ENST00000274255 KIF3AQ9Y496 699 aa13.64□□□□□ -0.23
SKP2-202ENST00000274255 NOLC1Q14978 699 aaKnown RBP eCLIP13.64□□□□□ -0.23
SKP2-202ENST00000274255 CCT4P50991 539 aaKnown RBP13.63□□□□□ -0.23
SKP2-202ENST00000274255 HSP90AA4PQ58FG1 418 aa13.63□□□□□ -0.23
SKP2-202ENST00000274255 HOMER1Q86YM7 354 aa13.63□□□□□ -0.23
SKP2-202ENST00000274255 KLHDC4Q8TBB5 520 aa13.63□□□□□ -0.23
SKP2-202ENST00000274255 SDF4Q9BRK5 362 aa13.63□□□□□ -0.23
SKP2-202ENST00000274255 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.63□□□□□ -0.23
SKP2-202ENST00000274255 STX6O43752 255 aa13.63□□□□□ -0.23
SKP2-202ENST00000274255 RIC3Q7Z5B4 369 aa13.63□□□□□ -0.23
SKP2-202ENST00000274255 CYP46A1Q9Y6A2 500 aa13.63□□□□□ -0.23
SKP2-202ENST00000274255 FANCAO15360 1455 aa13.63□□□□□ -0.23
SKP2-202ENST00000274255 RAB11FIP3O75154 756 aa13.63□□□□□ -0.23
SKP2-202ENST00000274255 PLCH2O75038 1416 aa13.63□□□□□ -0.23
SKP2-202ENST00000274255 WASLO00401 505 aaPredicted RBP13.62□□□□□ -0.23
SKP2-202ENST00000274255 AK2P54819 239 aa13.62□□□□□ -0.23
SKP2-202ENST00000274255 LUZP1Q86V48 1076 aa13.62□□□□□ -0.23
SKP2-202ENST00000274255 ITSN2Q9NZM3 1697 aa13.62□□□□□ -0.23
SKP2-202ENST00000274255 PDCL2Q8N4E4 241 aa13.62□□□□□ -0.23
SKP2-202ENST00000274255 NUP160Q12769 1436 aa13.62□□□□□ -0.23
SKP2-202ENST00000274255 BIN1O00499 593 aa13.62□□□□□ -0.23
SKP2-202ENST00000274255 CCT2P78371 535 aaKnown RBP13.62□□□□□ -0.23
SKP2-202ENST00000274255 CHMLP26374 656 aa13.61□□□□□ -0.23
SKP2-202ENST00000274255 TTLL5Q6EMB2 1281 aa13.61□□□□□ -0.23
SKP2-202ENST00000274255 CCDC186Q7Z3E2 898 aa13.61□□□□□ -0.23
SKP2-202ENST00000274255 RUFY2Q8WXA3 655 aa13.61□□□□□ -0.23
SKP2-202ENST00000274255 ZFP91Q96JP5 570 aaPredicted RBP13.61□□□□□ -0.23
SKP2-202ENST00000274255 SPATA32Q96LK8 384 aa13.61□□□□□ -0.23
SKP2-202ENST00000274255 PTGS1P23219 599 aa13.61□□□□□ -0.23
SKP2-202ENST00000274255 CHST3Q7LGC8 479 aa13.61□□□□□ -0.23
SKP2-202ENST00000274255 SLC52A1Q9NWF4 448 aa13.61□□□□□ -0.23
SKP2-202ENST00000274255 EDC3Q96F86 508 aaKnown RBP13.6□□□□□ -0.23
SKP2-202ENST00000274255 CCDC192P0DO97 292 aa13.6□□□□□ -0.23
SKP2-202ENST00000274255 SYT1P21579 422 aa13.6□□□□□ -0.23
SKP2-202ENST00000274255 NUP62CLQ9H1M0 184 aa13.6□□□□□ -0.23
SKP2-202ENST00000274255 NOL7Q9UMY1 257 aaKnown RBP13.6□□□□□ -0.23
SKP2-202ENST00000274255 IL13P35225 146 aa13.6□□□□□ -0.23
SKP2-202ENST00000274255 TARBP1Q13395 1621 aaKnown RBP13.59□□□□□ -0.23
SKP2-202ENST00000274255 CWF19L2Q2TBE0 894 aaKnown RBP13.59□□□□□ -0.23
SKP2-202ENST00000274255 IL16Q14005 1332 aa13.59□□□□□ -0.23
SKP2-202ENST00000274255 CEP170Q5SW79 1584 aa13.59□□□□□ -0.23
SKP2-202ENST00000274255 SMC2O95347 1197 aa13.59□□□□□ -0.23
SKP2-202ENST00000274255 C1orf141Q5JVX7 400 aa13.59□□□□□ -0.23
SKP2-202ENST00000274255 CCDC183Q5T5S1 534 aa13.59□□□□□ -0.23
SKP2-202ENST00000274255 ZDHHC9Q9Y397 364 aa13.59□□□□□ -0.23
SKP2-202ENST00000274255 SYNMO15061 1565 aa13.59□□□□□ -0.23
SKP2-202ENST00000274255 ACEP12821 1306 aa13.59□□□□□ -0.23
SKP2-202ENST00000274255 MCM2P49736 904 aa13.59□□□□□ -0.23
SKP2-202ENST00000274255 ATP10AO60312 1499 aa13.58□□□□□ -0.23
SKP2-202ENST00000274255 APPP05067 770 aa13.58□□□□□ -0.23
SKP2-202ENST00000274255 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.23
SKP2-202ENST00000274255 ME1P48163 572 aa13.58□□□□□ -0.23
SKP2-202ENST00000274255 HDGFP51858 240 aaKnown RBP13.58□□□□□ -0.23
SKP2-202ENST00000274255 RHPN1Q8TCX5 695 aa13.58□□□□□ -0.23
SKP2-202ENST00000274255 DACT1Q9NYF0 836 aa13.58□□□□□ -0.23
SKP2-202ENST00000274255 LIMCH1Q9UPQ0 1083 aa13.58□□□□□ -0.23
SKP2-202ENST00000274255 NBPF7P0C2Y1 421 aaPredicted RBP13.58□□□□□ -0.24
SKP2-202ENST00000274255 KRT85P78386 507 aa13.58□□□□□ -0.24
SKP2-202ENST00000274255 PSME1Q06323 249 aa13.58□□□□□ -0.24
SKP2-202ENST00000274255 LRMPQ12912 555 aa13.58□□□□□ -0.24
SKP2-202ENST00000274255 ZNF530Q6P9A1 599 aaPredicted RBP13.58□□□□□ -0.24
SKP2-202ENST00000274255 BLOC1S2Q6QNY1 142 aa13.58□□□□□ -0.24
SKP2-202ENST00000274255 CD109Q6YHK3 1445 aa13.58□□□□□ -0.24
SKP2-202ENST00000274255 DUOX2Q9NRD8 1548 aa13.58□□□□□ -0.24
SKP2-202ENST00000274255 ARHGAP45Q92619 1136 aa13.58□□□□□ -0.24
SKP2-202ENST00000274255 CHPF2Q9P2E5 772 aa13.58□□□□□ -0.24
SKP2-202ENST00000274255 DNAJC25Q9H1X3 360 aa13.57□□□□□ -0.24
SKP2-202ENST00000274255 CGNQ9P2M7 1197 aaKnown RBP13.57□□□□□ -0.24
SKP2-202ENST00000274255 SHANK2Q9UPX8 1470 aa13.57□□□□□ -0.24
SKP2-202ENST00000274255 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
SKP2-202ENST00000274255 NPC1L1Q9UHC9 1359 aa13.57□□□□□ -0.24
SKP2-202ENST00000274255 AK9Q5TCS8 1911 aa13.57□□□□□ -0.24
SKP2-202ENST00000274255 WASHC4Q2M389 1173 aa13.57□□□□□ -0.24
SKP2-202ENST00000274255 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
SKP2-202ENST00000274255 ZSCAN22P10073 491 aaPredicted RBP13.56□□□□□ -0.24
SKP2-202ENST00000274255 ZC3H6P61129 1189 aaKnown RBP13.56□□□□□ -0.24
SKP2-202ENST00000274255 NLRP2Q9NX02 1062 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 SAMD9LQ8IVG5 1584 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 PTCD1O75127 700 aaKnown RBP13.56□□□□□ -0.24
SKP2-202ENST00000274255 ZNF445P59923 1031 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 MAP3K11Q16584 847 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 CCDC82Q8N4S0 544 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 PODXL2Q9NZ53 605 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms