RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 EP400Q96L91 3159 aa11.11□□□□□ -0.63
TRIM43-201ENST00000272395 SKAP1Q86WV1 359 aa11.11□□□□□ -0.63
TRIM43-201ENST00000272395 IL16Q14005 1332 aa11.1□□□□□ -0.63
TRIM43-201ENST00000272395 BRWD3Q6RI45 1802 aa11.1□□□□□ -0.63
TRIM43-201ENST00000272395 CYP27B1O15528 508 aa11.1□□□□□ -0.63
TRIM43-201ENST00000272395 PHACTR3Q96KR7 559 aa11.1□□□□□ -0.63
TRIM43-201ENST00000272395 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
TRIM43-201ENST00000272395 SPG7Q9UQ90 795 aa11.1□□□□□ -0.63
TRIM43-201ENST00000272395 IGHDP01880 384 aa11.09□□□□□ -0.63
TRIM43-201ENST00000272395 NEFMP07197 916 aa11.09□□□□□ -0.63
TRIM43-201ENST00000272395 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
TRIM43-201ENST00000272395 PLEKHO1Q53GL0 409 aaPredicted RBP11.09□□□□□ -0.63
TRIM43-201ENST00000272395 ZNF530Q6P9A1 599 aaPredicted RBP11.09□□□□□ -0.63
TRIM43-201ENST00000272395 PANK1Q8TE04 598 aa11.09□□□□□ -0.63
TRIM43-201ENST00000272395 COG6Q9Y2V7 657 aa11.09□□□□□ -0.63
TRIM43-201ENST00000272395 PCDH11XQ9BZA7 1347 aa11.09□□□□□ -0.63
TRIM43-201ENST00000272395 PCDH11YQ9BZA8 1340 aa11.09□□□□□ -0.63
TRIM43-201ENST00000272395 FCHSD2O94868 740 aa11.08□□□□□ -0.64
TRIM43-201ENST00000272395 RGS3P49796 1198 aa11.08□□□□□ -0.64
TRIM43-201ENST00000272395 NEUROD2Q15784 382 aa11.08□□□□□ -0.64
TRIM43-201ENST00000272395 PTF1AQ7RTS3 328 aa11.08□□□□□ -0.64
TRIM43-201ENST00000272395 RRP7AQ9Y3A4 280 aaKnown RBP11.08□□□□□ -0.64
TRIM43-201ENST00000272395 PHKG2P15735 406 aa11.08□□□□□ -0.64
TRIM43-201ENST00000272395 AMOTQ4VCS5 1084 aa11.08□□□□□ -0.64
TRIM43-201ENST00000272395 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.64
TRIM43-201ENST00000272395 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
TRIM43-201ENST00000272395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRIM43-201ENST00000272395 SHANK3Q9BYB0 1731 aa11.07□□□□□ -0.64
TRIM43-201ENST00000272395 FAM196AQ6ZSG2 479 aa11.07□□□□□ -0.64
TRIM43-201ENST00000272395 FRAT1Q92837 279 aaPredicted RBP11.07□□□□□ -0.64
TRIM43-201ENST00000272395 RWDD1Q9H446 243 aaPredicted RBP11.07□□□□□ -0.64
TRIM43-201ENST00000272395 PKD1L3Q7Z443 1732 aa11.07□□□□□ -0.64
TRIM43-201ENST00000272395 KCNQ2O43526 872 aa11.06□□□□□ -0.64
TRIM43-201ENST00000272395 TRIM37O94972 964 aa11.06□□□□□ -0.64
TRIM43-201ENST00000272395 LAS1LQ9Y4W2 734 aaKnown RBP11.06□□□□□ -0.64
TRIM43-201ENST00000272395 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
TRIM43-201ENST00000272395 ZKSCAN2Q63HK3 967 aa11.05□□□□□ -0.64
TRIM43-201ENST00000272395 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
TRIM43-201ENST00000272395 PLEKHG2Q9H7P9 1386 aa11.05□□□□□ -0.64
TRIM43-201ENST00000272395 TMPOP42166 694 aaKnown RBP11.04□□□□□ -0.64
TRIM43-201ENST00000272395 PRIM1P49642 420 aaKnown RBP11.04□□□□□ -0.64
TRIM43-201ENST00000272395 MVPQ14764 893 aaKnown RBP11.04□□□□□ -0.64
TRIM43-201ENST00000272395 MPRIPQ6WCQ1 1025 aa11.04□□□□□ -0.64
TRIM43-201ENST00000272395 SYTL4Q96C24 671 aaPredicted RBP11.04□□□□□ -0.64
TRIM43-201ENST00000272395 KDM6AO15550 1401 aaPredicted RBP11.04□□□□□ -0.64
TRIM43-201ENST00000272395 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
TRIM43-201ENST00000272395 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
TRIM43-201ENST00000272395 GAS2L2Q8NHY3 880 aa11.04□□□□□ -0.64
TRIM43-201ENST00000272395 UPF1Q92900 1129 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRIM43-201ENST00000272395 RLBP1P12271 317 aa11.03□□□□□ -0.64
TRIM43-201ENST00000272395 DZIP1LQ8IYY4 767 aaKnown RBP11.03□□□□□ -0.64
TRIM43-201ENST00000272395 ZNF428Q96B54 188 aa11.03□□□□□ -0.64
TRIM43-201ENST00000272395 LGR6Q9HBX8 967 aa11.03□□□□□ -0.64
TRIM43-201ENST00000272395 BCL9O00512 1426 aa11.03□□□□□ -0.64
TRIM43-201ENST00000272395 MAP3K5Q99683 1374 aa11.03□□□□□ -0.64
TRIM43-201ENST00000272395 NFE2L2Q16236 605 aa11.02□□□□□ -0.64
TRIM43-201ENST00000272395 TRIM35Q9UPQ4 493 aa11.02□□□□□ -0.64
TRIM43-201ENST00000272395 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.64
TRIM43-201ENST00000272395 GNAT3A8MTJ3 354 aa11.01□□□□□ -0.65
TRIM43-201ENST00000272395 DCTN1Q14203 1278 aa11.01□□□□□ -0.65
TRIM43-201ENST00000272395 BECN1Q14457 450 aa11.01□□□□□ -0.65
TRIM43-201ENST00000272395 MCM10Q7L590 875 aa11.01□□□□□ -0.65
TRIM43-201ENST00000272395 FTSJ3Q8IY81 847 aaKnown RBP11.01□□□□□ -0.65
TRIM43-201ENST00000272395 DCAF5Q96JK2 942 aa11.01□□□□□ -0.65
TRIM43-201ENST00000272395 UPF2Q9HAU5 1272 aaKnown RBP11.01□□□□□ -0.65
TRIM43-201ENST00000272395 KIF16BQ96L93 1317 aa11.01□□□□□ -0.65
TRIM43-201ENST00000272395 IPO8O15397 1037 aaKnown RBP11.01□□□□□ -0.65
TRIM43-201ENST00000272395 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
TRIM43-201ENST00000272395 APBA3O96018 575 aa11.01□□□□□ -0.65
TRIM43-201ENST00000272395 HSP90AB1P08238 724 aaKnown RBP11.01□□□□□ -0.65
TRIM43-201ENST00000272395 HDAC1Q13547 482 aaPredicted RBP11.01□□□□□ -0.65
TRIM43-201ENST00000272395 NFKBIBQ15653 356 aa11.01□□□□□ -0.65
TRIM43-201ENST00000272395 IL17REQ8NFR9 667 aa11.01□□□□□ -0.65
TRIM43-201ENST00000272395 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
TRIM43-201ENST00000272395 BCL11BQ9C0K0 894 aaPredicted RBP11.01□□□□□ -0.65
TRIM43-201ENST00000272395 DDX19BQ9UMR2 479 aa11.01□□□□□ -0.65
TRIM43-201ENST00000272395 TOGARAM1Q9Y4F4 1720 aa11□□□□□ -0.65
TRIM43-201ENST00000272395 RIPK4P57078 832 aa11□□□□□ -0.65
TRIM43-201ENST00000272395 EXOSC9Q06265 439 aaKnown RBP11□□□□□ -0.65
TRIM43-201ENST00000272395 ALDH1L2Q3SY69 923 aa11□□□□□ -0.65
TRIM43-201ENST00000272395 DEFB132Q7Z7B7 95 aa11□□□□□ -0.65
TRIM43-201ENST00000272395 DOT1LQ8TEK3 1739 aa11□□□□□ -0.65
TRIM43-201ENST00000272395 PIGBQ92521 554 aa11□□□□□ -0.65
TRIM43-201ENST00000272395 SMC4Q9NTJ3 1288 aa11□□□□□ -0.65
TRIM43-201ENST00000272395 PDZRN3Q9UPQ7 1066 aa11□□□□□ -0.65
TRIM43-201ENST00000272395 BRPF1P55201 1214 aaPredicted RBP10.99□□□□□ -0.65
TRIM43-201ENST00000272395 CABP4P57796 275 aa10.99□□□□□ -0.65
TRIM43-201ENST00000272395 CALD1Q05682 793 aaKnown RBP10.99□□□□□ -0.65
TRIM43-201ENST00000272395 ATF7IPQ6VMQ6 1270 aa10.99□□□□□ -0.65
TRIM43-201ENST00000272395 TMOD3Q9NYL9 352 aa10.99□□□□□ -0.65
TRIM43-201ENST00000272395 DLG5Q8TDM6 1919 aa10.99□□□□□ -0.65
TRIM43-201ENST00000272395 SOCS7O14512 581 aa10.98□□□□□ -0.65
TRIM43-201ENST00000272395 SF3B2Q13435 895 aaKnown RBP10.98□□□□□ -0.65
TRIM43-201ENST00000272395 NFATC2IPQ8NCF5 419 aa10.98□□□□□ -0.65
TRIM43-201ENST00000272395 RTF1Q92541 710 aaKnown RBP10.98□□□□□ -0.65
TRIM43-201ENST00000272395 BCL2L13Q9BXK5 485 aa10.98□□□□□ -0.65
TRIM43-201ENST00000272395 NHSQ6T4R5 1651 aa10.98□□□□□ -0.65
TRIM43-201ENST00000272395 ERVV-2B6SEH9 535 aa10.98□□□□□ -0.65
TRIM43-201ENST00000272395 TRIM27P14373 513 aa10.98□□□□□ -0.65
TRIM43-201ENST00000272395 EN1Q05925 392 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms