RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 RAPGEF3O95398 923 aa12.31□□□□□ -0.44
OTOF-201ENST00000272371 GNAI2P04899 355 aa12.31□□□□□ -0.44
OTOF-201ENST00000272371 MAP4K4O95819 1239 aaPredicted RBP12.31□□□□□ -0.44
OTOF-201ENST00000272371 PAFAH1B1P43034 410 aa12.31□□□□□ -0.44
OTOF-201ENST00000272371 HSPA2P54652 639 aa12.3□□□□□ -0.44
OTOF-201ENST00000272371 CCDC69A6NI79 296 aa12.3□□□□□ -0.44
OTOF-201ENST00000272371 C6orf163Q5TEZ5 329 aa12.3□□□□□ -0.44
OTOF-201ENST00000272371 PAF1Q8N7H5 531 aa12.3□□□□□ -0.44
OTOF-201ENST00000272371 BLOC1S2Q6QNY1 142 aa12.3□□□□□ -0.44
OTOF-201ENST00000272371 CPSF2Q9P2I0 782 aaKnown RBP12.3□□□□□ -0.44
OTOF-201ENST00000272371 GRM1Q13255 1194 aa12.3□□□□□ -0.44
OTOF-201ENST00000272371 HSF2BPO75031 334 aa12.3□□□□□ -0.44
OTOF-201ENST00000272371 SPECC1Q5M775 1068 aa12.3□□□□□ -0.44
OTOF-201ENST00000272371 JAKMIP1Q96N16 626 aaKnown RBP12.3□□□□□ -0.44
OTOF-201ENST00000272371 SLC3A2P08195 630 aaKnown RBP12.29□□□□□ -0.44
OTOF-201ENST00000272371 MSL1Q68DK7 614 aa12.29□□□□□ -0.44
OTOF-201ENST00000272371 TNPO1Q92973 898 aaKnown RBP12.29□□□□□ -0.44
OTOF-201ENST00000272371 CFAP57Q96MR6 1250 aa12.29□□□□□ -0.44
OTOF-201ENST00000272371 MYOM3Q5VTT5 1437 aa12.29□□□□□ -0.44
OTOF-201ENST00000272371 SMAP1Q8IYB5 467 aaPredicted RBP12.29□□□□□ -0.44
OTOF-201ENST00000272371 SRRTQ9BXP5 876 aaKnown RBP12.29□□□□□ -0.44
OTOF-201ENST00000272371 MAATS1Q7Z4T9 603 aa12.29□□□□□ -0.44
OTOF-201ENST00000272371 CDKL5O76039 1030 aa12.29□□□□□ -0.44
OTOF-201ENST00000272371 AIMP1Q12904 312 aaKnown RBP12.29□□□□□ -0.44
OTOF-201ENST00000272371 NAA15Q9BXJ9 866 aaKnown RBP12.29□□□□□ -0.44
OTOF-201ENST00000272371 WDHD1O75717 1129 aaPredicted RBP12.29□□□□□ -0.44
OTOF-201ENST00000272371 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
OTOF-201ENST00000272371 GOLGA6L9A6NEM1 432 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 ATP2C2O75185 946 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 WDR66Q8TBY9 1149 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 GPRASP1Q5JY77 1395 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 C8orf37Q96NL8 207 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 CCDC171Q6TFL3 1326 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 WWC2Q6AWC2 1192 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 SRCIN1Q9C0H9 1055 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 PLEKHH1Q9ULM0 1364 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 EXOSC9Q06265 439 aaKnown RBP12.28□□□□□ -0.44
OTOF-201ENST00000272371 MVPQ14764 893 aaKnown RBP12.28□□□□□ -0.44
OTOF-201ENST00000272371 CCDC30Q5VVM6 783 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 CCDC57Q2TAC2 916 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 USO1O60763 962 aaKnown RBP12.28□□□□□ -0.44
OTOF-201ENST00000272371 SSR1P43307 286 aaKnown RBP12.28□□□□□ -0.44
OTOF-201ENST00000272371 HLTFQ14527 1009 aaKnown RBP eCLIP12.28□□□□□ -0.44
OTOF-201ENST00000272371 CEP112Q8N8E3 955 aa12.28□□□□□ -0.44
OTOF-201ENST00000272371 CCDC160A6NGH7 325 aa12.27□□□□□ -0.44
OTOF-201ENST00000272371 SSFA2P28290 1259 aa12.27□□□□□ -0.44
OTOF-201ENST00000272371 GSTTP1A0A1W2PQM5 241 aa12.27□□□□□ -0.44
OTOF-201ENST00000272371 UVSSAQ2YD98 709 aa12.27□□□□□ -0.44
OTOF-201ENST00000272371 BEGAINQ9BUH8 593 aa12.27□□□□□ -0.44
OTOF-201ENST00000272371 CTAGE5O15320 804 aa12.27□□□□□ -0.45
OTOF-201ENST00000272371 CEP131Q9UPN4 1083 aa12.27□□□□□ -0.45
OTOF-201ENST00000272371 CCDC6Q16204 474 aa12.27□□□□□ -0.45
OTOF-201ENST00000272371 TTC39AQ5SRH9 613 aa12.27□□□□□ -0.45
OTOF-201ENST00000272371 TMC6Q7Z403 805 aa12.27□□□□□ -0.45
OTOF-201ENST00000272371 RASSF4Q9H2L5 321 aa12.27□□□□□ -0.45
OTOF-201ENST00000272371 SEPT6Q14141 434 aa12.27□□□□□ -0.45
OTOF-201ENST00000272371 CEP57Q86XR8 500 aa12.27□□□□□ -0.45
OTOF-201ENST00000272371 NUP88Q99567 741 aaPredicted RBP12.26□□□□□ -0.45
OTOF-201ENST00000272371 ARFGAP3Q9NP61 516 aa12.26□□□□□ -0.45
OTOF-201ENST00000272371 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
OTOF-201ENST00000272371 C10orf67Q8IYJ2 551 aa12.26□□□□□ -0.45
OTOF-201ENST00000272371 MIA2Q96PC5 1412 aa12.26□□□□□ -0.45
OTOF-201ENST00000272371 GBP6Q6ZN66 633 aa12.26□□□□□ -0.45
OTOF-201ENST00000272371 ANKRD18BA2A2Z9 1011 aa12.26□□□□□ -0.45
OTOF-201ENST00000272371 FKBP15Q5T1M5 1219 aa12.26□□□□□ -0.45
OTOF-201ENST00000272371 CETN2P41208 172 aa12.26□□□□□ -0.45
OTOF-201ENST00000272371 SARNPP82979 210 aaKnown RBP12.26□□□□□ -0.45
OTOF-201ENST00000272371 TCP11L2Q8N4U5 519 aa12.26□□□□□ -0.45
OTOF-201ENST00000272371 FBF1Q8TES7 1133 aa12.26□□□□□ -0.45
OTOF-201ENST00000272371 NUTM2GQ5VZR2 741 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 TAOK3Q9H2K8 898 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 NLRP2Q9NX02 1062 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 CAPN2P17655 700 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 DESP17661 470 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 DNA2P51530 1060 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 NOLC1Q14978 699 aaKnown RBP eCLIP12.25□□□□□ -0.45
OTOF-201ENST00000272371 ALS2CR12Q96Q35 445 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 LIG1P18858 919 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 ZSCAN23Q3MJ62 389 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 CCDC150Q8NCX0 1101 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.25□□□□□ -0.45
OTOF-201ENST00000272371 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
OTOF-201ENST00000272371 NSRP1Q9H0G5 558 aaKnown RBP12.25□□□□□ -0.45
OTOF-201ENST00000272371 BMP2KQ9NSY1 1161 aaPredicted RBP12.25□□□□□ -0.45
OTOF-201ENST00000272371 HYPKQ9NX55 129 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 POLD1P28340 1107 aa12.25□□□□□ -0.45
OTOF-201ENST00000272371 YEATS4O95619 227 aa12.24□□□□□ -0.45
OTOF-201ENST00000272371 CWC27Q6UX04 472 aaKnown RBP12.24□□□□□ -0.45
OTOF-201ENST00000272371 CACNA2D4Q7Z3S7 1137 aa12.24□□□□□ -0.45
OTOF-201ENST00000272371 RSRC1Q96IZ7 334 aaKnown RBP12.24□□□□□ -0.45
OTOF-201ENST00000272371 SCLT1Q96NL6 688 aa12.24□□□□□ -0.45
OTOF-201ENST00000272371 KRT32Q14532 448 aa12.24□□□□□ -0.45
OTOF-201ENST00000272371 STX1AQ16623 288 aa12.24□□□□□ -0.45
OTOF-201ENST00000272371 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
OTOF-201ENST00000272371 TBC1D2Q9BYX2 928 aa12.24□□□□□ -0.45
OTOF-201ENST00000272371 CEP83Q9Y592 693 aa12.24□□□□□ -0.45
OTOF-201ENST00000272371 SCAPERQ9BY12 1400 aa12.24□□□□□ -0.45
OTOF-201ENST00000272371 A0A1B0GUL7 405 aa12.24□□□□□ -0.45
OTOF-201ENST00000272371 CKAP2LQ8IYA6 745 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms