RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 RREB1Q92766 1687 aa20.5■□□□□ 0.87
ATP6V1C2-201ENST00000272238 ERVV-2B6SEH9 535 aa20.49■□□□□ 0.87
ATP6V1C2-201ENST00000272238 BAG6P46379 1132 aa20.49■□□□□ 0.87
ATP6V1C2-201ENST00000272238 EN1Q05925 392 aaPredicted RBP20.49■□□□□ 0.87
ATP6V1C2-201ENST00000272238 TEFQ10587 303 aa20.49■□□□□ 0.87
ATP6V1C2-201ENST00000272238 NFATC2IPQ8NCF5 419 aa20.49■□□□□ 0.87
ATP6V1C2-201ENST00000272238 SLC52A2Q9HAB3 445 aa20.49■□□□□ 0.87
ATP6V1C2-201ENST00000272238 SALL2Q9Y467 1007 aaPredicted RBP20.49■□□□□ 0.87
ATP6V1C2-201ENST00000272238 CEMIPQ8WUJ3 1361 aa20.48■□□□□ 0.87
ATP6V1C2-201ENST00000272238 CCDC125Q86Z20 511 aa20.47■□□□□ 0.87
ATP6V1C2-201ENST00000272238 NUP188Q5SRE5 1749 aa20.47■□□□□ 0.87
ATP6V1C2-201ENST00000272238 PALLDQ8WX93 1383 aa20.46■□□□□ 0.87
ATP6V1C2-201ENST00000272238 LMOD3Q0VAK6 560 aa20.46■□□□□ 0.87
ATP6V1C2-201ENST00000272238 EZH2Q15910 746 aaKnown RBP20.45■□□□□ 0.86
ATP6V1C2-201ENST00000272238 ASAP1Q9ULH1 1129 aa20.45■□□□□ 0.86
ATP6V1C2-201ENST00000272238 KDM3BQ7LBC6 1761 aa20.45■□□□□ 0.86
ATP6V1C2-201ENST00000272238 UBR2Q8IWV8 1755 aa20.45■□□□□ 0.86
ATP6V1C2-201ENST00000272238 HTATSF1O43719 755 aaKnown RBP20.44■□□□□ 0.86
ATP6V1C2-201ENST00000272238 TRIM35Q9UPQ4 493 aa20.44■□□□□ 0.86
ATP6V1C2-201ENST00000272238 C5P01031 1676 aa20.43■□□□□ 0.86
ATP6V1C2-201ENST00000272238 SLC39A6Q13433 755 aa20.43■□□□□ 0.86
ATP6V1C2-201ENST00000272238 KCNQ4P56696 695 aa20.42■□□□□ 0.86
ATP6V1C2-201ENST00000272238 ATG3Q9NT62 314 aa20.42■□□□□ 0.86
ATP6V1C2-201ENST00000272238 KCPQ6ZWJ8 1503 aa20.41■□□□□ 0.86
ATP6V1C2-201ENST00000272238 TAF1LQ8IZX4 1826 aa20.41■□□□□ 0.86
ATP6V1C2-201ENST00000272238 TJP1Q07157 1748 aa20.4■□□□□ 0.86
ATP6V1C2-201ENST00000272238 BTBD11A6QL63 1104 aa20.4■□□□□ 0.86
ATP6V1C2-201ENST00000272238 RBM42Q9BTD8 480 aaKnown RBP20.4■□□□□ 0.86
ATP6V1C2-201ENST00000272238 MIS18AQ9NYP9 233 aa20.4■□□□□ 0.86
ATP6V1C2-201ENST00000272238 LAS1LQ9Y4W2 734 aaKnown RBP20.4■□□□□ 0.86
ATP6V1C2-201ENST00000272238 PLSCR1O15162 318 aa20.39■□□□□ 0.85
ATP6V1C2-201ENST00000272238 PTCD1O75127 700 aaKnown RBP20.39■□□□□ 0.85
ATP6V1C2-201ENST00000272238 TXNRD1Q16881 649 aa20.39■□□□□ 0.85
ATP6V1C2-201ENST00000272238 TTC5Q8N0Z6 440 aa20.39■□□□□ 0.85
ATP6V1C2-201ENST00000272238 CAMKK2Q96RR4 588 aa20.39■□□□□ 0.85
ATP6V1C2-201ENST00000272238 SMARCC1Q92922 1105 aaPredicted RBP20.38■□□□□ 0.85
ATP6V1C2-201ENST00000272238 CCNL1Q9UK58 526 aaPredicted RBP20.38■□□□□ 0.85
ATP6V1C2-201ENST00000272238 COL5A3P25940 1745 aaPredicted RBP20.37■□□□□ 0.85
ATP6V1C2-201ENST00000272238 KCNQ3O43525 872 aa20.36■□□□□ 0.85
ATP6V1C2-201ENST00000272238 TAF7Q15545 349 aaPredicted RBP20.36■□□□□ 0.85
ATP6V1C2-201ENST00000272238 ZNF790Q6PG37 636 aa20.36■□□□□ 0.85
ATP6V1C2-201ENST00000272238 LOC102724428A0A0B4J2F2 783 aa20.35■□□□□ 0.85
ATP6V1C2-201ENST00000272238 SIK1P57059 783 aa20.35■□□□□ 0.85
ATP6V1C2-201ENST00000272238 PROM2Q8N271 834 aa20.35■□□□□ 0.85
ATP6V1C2-201ENST00000272238 TSPYL4Q9UJ04 414 aa20.35■□□□□ 0.85
ATP6V1C2-201ENST00000272238 ZNF831Q5JPB2 1677 aa20.35■□□□□ 0.85
ATP6V1C2-201ENST00000272238 C4BP0C0L5 1744 aa20.34■□□□□ 0.85
ATP6V1C2-201ENST00000272238 WWC1Q8IX03 1113 aa20.34■□□□□ 0.85
ATP6V1C2-201ENST00000272238 LRRC4BQ9NT99 713 aa20.34■□□□□ 0.85
ATP6V1C2-201ENST00000272238 CICQ96RK0 1608 aaPredicted RBP20.34■□□□□ 0.85
ATP6V1C2-201ENST00000272238 ATP6V1AP38606 617 aa20.34■□□□□ 0.85
ATP6V1C2-201ENST00000272238 LAMB4A4D0S4 1761 aa20.33■□□□□ 0.85
ATP6V1C2-201ENST00000272238 TUBGCP6Q96RT7 1819 aa20.33■□□□□ 0.85
ATP6V1C2-201ENST00000272238 HNRNPUQ00839 825 aaKnown RBP eCLIP20.32■□□□□ 0.84
ATP6V1C2-201ENST00000272238 CCDC27Q2M243 656 aa20.32■□□□□ 0.84
ATP6V1C2-201ENST00000272238 ZNF496Q96IT1 587 aaPredicted RBP20.32■□□□□ 0.84
ATP6V1C2-201ENST00000272238 SLC4A9Q96Q91 983 aa20.32■□□□□ 0.84
ATP6V1C2-201ENST00000272238 CALD1Q05682 793 aaKnown RBP20.31■□□□□ 0.84
ATP6V1C2-201ENST00000272238 SLC27A3Q5K4L6 730 aa20.31■□□□□ 0.84
ATP6V1C2-201ENST00000272238 ITPK1Q13572 414 aa20.3■□□□□ 0.84
ATP6V1C2-201ENST00000272238 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
ATP6V1C2-201ENST00000272238 ANO8Q9HCE9 1232 aaPredicted RBP20.29■□□□□ 0.84
ATP6V1C2-201ENST00000272238 HEG1Q9ULI3 1381 aa20.29■□□□□ 0.84
ATP6V1C2-201ENST00000272238 LINC00116Q8NCU8 138 aa20.29■□□□□ 0.84
ATP6V1C2-201ENST00000272238 DNAJC10Q8IXB1 793 aa20.28■□□□□ 0.84
ATP6V1C2-201ENST00000272238 TSR2Q969E8 191 aaKnown RBP20.28■□□□□ 0.84
ATP6V1C2-201ENST00000272238 CFAP44Q96MT7 982 aa20.28■□□□□ 0.84
ATP6V1C2-201ENST00000272238 MBIPQ9NS73 344 aa20.28■□□□□ 0.84
ATP6V1C2-201ENST00000272238 IFT57Q9NWB7 429 aa20.28■□□□□ 0.84
ATP6V1C2-201ENST00000272238 PRAMEF22A3QJZ6 481 aa20.27■□□□□ 0.84
ATP6V1C2-201ENST00000272238 GNAI1P63096 354 aa20.27■□□□□ 0.84
ATP6V1C2-201ENST00000272238 ZNF827Q17R98 1081 aa20.27■□□□□ 0.84
ATP6V1C2-201ENST00000272238 UBR3Q6ZT12 1888 aa20.26■□□□□ 0.83
ATP6V1C2-201ENST00000272238 MYH14Q7Z406 1995 aaKnown RBP20.26■□□□□ 0.83
ATP6V1C2-201ENST00000272238 CHL1O00533 1208 aa20.25■□□□□ 0.83
ATP6V1C2-201ENST00000272238 EIF4A1P60842 406 aaKnown RBP20.25■□□□□ 0.83
ATP6V1C2-201ENST00000272238 KRT24Q2M2I5 525 aa20.25■□□□□ 0.83
ATP6V1C2-201ENST00000272238 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
ATP6V1C2-201ENST00000272238 NGEFQ8N5V2 710 aa20.25■□□□□ 0.83
ATP6V1C2-201ENST00000272238 STK32BQ9NY57 414 aa20.25■□□□□ 0.83
ATP6V1C2-201ENST00000272238 ZNF521Q96K83 1311 aa20.25■□□□□ 0.83
ATP6V1C2-201ENST00000272238 ZNF853P0CG23 659 aa20.24■□□□□ 0.83
ATP6V1C2-201ENST00000272238 NBPF14Q5TI25 921 aa20.24■□□□□ 0.83
ATP6V1C2-201ENST00000272238 AK7Q96M32 723 aa20.24■□□□□ 0.83
ATP6V1C2-201ENST00000272238 SPINK5Q9NQ38 1064 aaPredicted RBP20.24■□□□□ 0.83
ATP6V1C2-201ENST00000272238 PSDA5PKW4 1024 aaPredicted RBP20.23■□□□□ 0.83
ATP6V1C2-201ENST00000272238 QSER1Q2KHR3 1735 aa20.23■□□□□ 0.83
ATP6V1C2-201ENST00000272238 WDR63Q8IWG1 891 aa20.23■□□□□ 0.83
ATP6V1C2-201ENST00000272238 YTHDC1Q96MU7 727 aaKnown RBP20.23■□□□□ 0.83
ATP6V1C2-201ENST00000272238 FANCIQ9NVI1 1328 aa20.23■□□□□ 0.83
ATP6V1C2-201ENST00000272238 BABAM1Q9NWV8 329 aa20.23■□□□□ 0.83
ATP6V1C2-201ENST00000272238 IL16Q14005 1332 aa20.22■□□□□ 0.83
ATP6V1C2-201ENST00000272238 PHF14O94880 888 aa20.22■□□□□ 0.83
ATP6V1C2-201ENST00000272238 R3HDM1Q15032 1099 aaKnown RBP20.22■□□□□ 0.83
ATP6V1C2-201ENST00000272238 VSIG10Q8N0Z9 540 aa20.22■□□□□ 0.83
ATP6V1C2-201ENST00000272238 C4AP0C0L4 1744 aa20.22■□□□□ 0.83
ATP6V1C2-201ENST00000272238 GNPATO15228 680 aa20.21■□□□□ 0.83
ATP6V1C2-201ENST00000272238 SNRPA1P09661 255 aaKnown RBP20.21■□□□□ 0.83
ATP6V1C2-201ENST00000272238 CRKLP46109 303 aaKnown RBP20.21■□□□□ 0.83
ATP6V1C2-201ENST00000272238 TFCP2L1Q9NZI6 479 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms