RNA–Protein interactions for RNA: ENST00000269740.8

SLC39A3-201, Transcript of solute carrier family 39 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A3, Length 1,502 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-201ENST00000269740 BABAM1Q9NWV8 329 aa31.14■■■□□ 2.57
SLC39A3-201ENST00000269740 ACSBG1Q96GR2 724 aa31.13■■■□□ 2.57
SLC39A3-201ENST00000269740 YTHDC1Q96MU7 727 aaKnown RBP31.13■■■□□ 2.57
SLC39A3-201ENST00000269740 CFAP44Q96MT7 982 aa31.12■■■□□ 2.57
SLC39A3-201ENST00000269740 GOLGA2Q08379 1002 aa31.11■■■□□ 2.57
SLC39A3-201ENST00000269740 SYTL4Q96C24 671 aaPredicted RBP31.11■■■□□ 2.57
SLC39A3-201ENST00000269740 IFT57Q9NWB7 429 aa31.11■■■□□ 2.57
SLC39A3-201ENST00000269740 GNAI1P63096 354 aa31.1■■■□□ 2.57
SLC39A3-201ENST00000269740 PIGBQ92521 554 aa31.09■■■□□ 2.57
SLC39A3-201ENST00000269740 KCNQ2O43526 872 aa31.08■■■□□ 2.57
SLC39A3-201ENST00000269740 ZNF853P0CG23 659 aa31.08■■■□□ 2.57
SLC39A3-201ENST00000269740 BTBD11A6QL63 1104 aa31.08■■■□□ 2.57
SLC39A3-201ENST00000269740 CHL1O00533 1208 aa31.08■■■□□ 2.57
SLC39A3-201ENST00000269740 BCL11BQ9C0K0 894 aaPredicted RBP31.08■■■□□ 2.57
SLC39A3-201ENST00000269740 BTAF1O14981 1849 aa31.05■■■□□ 2.56
SLC39A3-201ENST00000269740 KDM3BQ7LBC6 1761 aa31.05■■■□□ 2.56
SLC39A3-201ENST00000269740 E9PSI1 815 aa31.04■■■□□ 2.56
SLC39A3-201ENST00000269740 LAS1LQ9Y4W2 734 aaKnown RBP31.04■■■□□ 2.56
SLC39A3-201ENST00000269740 PAPPAQ13219 1627 aa31.03■■■□□ 2.56
SLC39A3-201ENST00000269740 MYH16Q9H6N6 1097 aa31.03■■■□□ 2.56
SLC39A3-201ENST00000269740 TSPYL4Q9UJ04 414 aa31.03■■■□□ 2.56
SLC39A3-201ENST00000269740 EP400Q96L91 3159 aa31.03■■■□□ 2.56
SLC39A3-201ENST00000269740 TRIM37O94972 964 aa31.02■■■□□ 2.56
SLC39A3-201ENST00000269740 SLFN5Q08AF3 891 aa31.02■■■□□ 2.56
SLC39A3-201ENST00000269740 ZNF790Q6PG37 636 aa31.02■■■□□ 2.56
SLC39A3-201ENST00000269740 SPINK5Q9NQ38 1064 aaPredicted RBP31.01■■■□□ 2.55
SLC39A3-201ENST00000269740 MIS18AQ9NYP9 233 aa31.01■■■□□ 2.55
SLC39A3-201ENST00000269740 MBIPQ9NS73 344 aa31■■■□□ 2.55
SLC39A3-201ENST00000269740 PTF1AQ7RTS3 328 aa30.99■■■□□ 2.55
SLC39A3-201ENST00000269740 TTC5Q8N0Z6 440 aa30.99■■■□□ 2.55
SLC39A3-201ENST00000269740 SMARCC1Q92922 1105 aaPredicted RBP30.99■■■□□ 2.55
SLC39A3-201ENST00000269740 ATG3Q9NT62 314 aa30.99■■■□□ 2.55
SLC39A3-201ENST00000269740 UBR2Q8IWV8 1755 aa30.99■■■□□ 2.55
SLC39A3-201ENST00000269740 TRMT2AQ8IZ69 625 aaKnown RBP30.98■■■□□ 2.55
SLC39A3-201ENST00000269740 CDCA7LQ96GN5 454 aa30.98■■■□□ 2.55
SLC39A3-201ENST00000269740 ASAP1Q9ULH1 1129 aa30.98■■■□□ 2.55
SLC39A3-201ENST00000269740 SLC39A6Q13433 755 aa30.98■■■□□ 2.55
SLC39A3-201ENST00000269740 FANCIQ9NVI1 1328 aa30.96■■■□□ 2.55
SLC39A3-201ENST00000269740 TNS1Q9HBL0 1735 aaKnown RBP30.95■■■□□ 2.55
SLC39A3-201ENST00000269740 TSR2Q969E8 191 aaKnown RBP30.94■■■□□ 2.54
SLC39A3-201ENST00000269740 KCNQ3O43525 872 aa30.93■■■□□ 2.54
SLC39A3-201ENST00000269740 EIF4A1P60842 406 aaKnown RBP30.93■■■□□ 2.54
SLC39A3-201ENST00000269740 CCDC125Q86Z20 511 aa30.93■■■□□ 2.54
SLC39A3-201ENST00000269740 DUSP27Q5VZP5 1158 aa30.92■■■□□ 2.54
SLC39A3-201ENST00000269740 FMNL2Q96PY5 1086 aa30.92■■■□□ 2.54
SLC39A3-201ENST00000269740 PALLDQ8WX93 1383 aa30.92■■■□□ 2.54
SLC39A3-201ENST00000269740 KCPQ6ZWJ8 1503 aa30.92■■■□□ 2.54
SLC39A3-201ENST00000269740 LY75O60449 1722 aa30.9■■■□□ 2.54
SLC39A3-201ENST00000269740 HEG1Q9ULI3 1381 aa30.9■■■□□ 2.54
SLC39A3-201ENST00000269740 PLSCR1O15162 318 aa30.9■■■□□ 2.54
SLC39A3-201ENST00000269740 ZNF496Q96IT1 587 aaPredicted RBP30.9■■■□□ 2.54
SLC39A3-201ENST00000269740 ZNF831Q5JPB2 1677 aa30.89■■■□□ 2.54
SLC39A3-201ENST00000269740 APBA3O96018 575 aa30.88■■■□□ 2.53
SLC39A3-201ENST00000269740 VSIG10Q8N0Z9 540 aa30.88■■■□□ 2.53
SLC39A3-201ENST00000269740 PTCD1O75127 700 aaKnown RBP30.88■■■□□ 2.53
SLC39A3-201ENST00000269740 RGPD3A6NKT7 1758 aaPredicted RBP30.87■■■□□ 2.53
SLC39A3-201ENST00000269740 RGPD4Q7Z3J3 1758 aa30.87■■■□□ 2.53
SLC39A3-201ENST00000269740 SF3B2Q13435 895 aaKnown RBP30.87■■■□□ 2.53
SLC39A3-201ENST00000269740 SOS1Q07889 1333 aaPredicted RBP30.86■■■□□ 2.53
SLC39A3-201ENST00000269740 RBM42Q9BTD8 480 aaKnown RBP30.86■■■□□ 2.53
SLC39A3-201ENST00000269740 LOC102724428A0A0B4J2F2 783 aa30.85■■■□□ 2.53
SLC39A3-201ENST00000269740 SIK1P57059 783 aa30.85■■■□□ 2.53
SLC39A3-201ENST00000269740 ILDR2Q71H61 639 aa30.85■■■□□ 2.53
SLC39A3-201ENST00000269740 CICQ96RK0 1608 aaPredicted RBP30.84■■■□□ 2.53
SLC39A3-201ENST00000269740 HOXB7P09629 217 aa30.84■■■□□ 2.53
SLC39A3-201ENST00000269740 EXOSC9Q06265 439 aaKnown RBP30.84■■■□□ 2.53
SLC39A3-201ENST00000269740 GIGYF1O75420 1035 aaPredicted RBP30.83■■■□□ 2.53
SLC39A3-201ENST00000269740 SNRPA1P09661 255 aaKnown RBP30.83■■■□□ 2.53
SLC39A3-201ENST00000269740 TEX13AQ9BXU3 409 aaPredicted RBP30.83■■■□□ 2.53
SLC39A3-201ENST00000269740 C8orf58Q8NAV2 365 aa30.82■■■□□ 2.52
SLC39A3-201ENST00000269740 HMGB2P26583 209 aaKnown RBP30.81■■■□□ 2.52
SLC39A3-201ENST00000269740 SLC4A9Q96Q91 983 aa30.81■■■□□ 2.52
SLC39A3-201ENST00000269740 KRT24Q2M2I5 525 aa30.8■■■□□ 2.52
SLC39A3-201ENST00000269740 TWISTNBQ3B726 338 aaPredicted RBP30.8■■■□□ 2.52
SLC39A3-201ENST00000269740 SLC27A3Q5K4L6 730 aa30.8■■■□□ 2.52
SLC39A3-201ENST00000269740 CHMP4AQ9BY43 222 aa30.8■■■□□ 2.52
SLC39A3-201ENST00000269740 CT47B1P0C2W7 299 aaPredicted RBP30.79■■■□□ 2.52
SLC39A3-201ENST00000269740 ATP6V1AP38606 617 aa30.79■■■□□ 2.52
SLC39A3-201ENST00000269740 BAG6P46379 1132 aa30.79■■■□□ 2.52
SLC39A3-201ENST00000269740 TSPYL6Q8N831 410 aa30.78■■■□□ 2.52
SLC39A3-201ENST00000269740 CCNL1Q9UK58 526 aaPredicted RBP30.78■■■□□ 2.52
SLC39A3-201ENST00000269740 C5P01031 1676 aa30.78■■■□□ 2.52
SLC39A3-201ENST00000269740 LAMB4A4D0S4 1761 aa30.78■■■□□ 2.52
SLC39A3-201ENST00000269740 TJP1Q07157 1748 aa30.77■■■□□ 2.52
SLC39A3-201ENST00000269740 ELL2O00472 640 aaPredicted RBP30.77■■■□□ 2.52
SLC39A3-201ENST00000269740 UPF1Q92900 1129 aaKnown RBP eCLIP30.77■■■□□ 2.521e-6■■■■□ 25.6
SLC39A3-201ENST00000269740 TXNRD1Q16881 649 aa30.76■■■□□ 2.51
SLC39A3-201ENST00000269740 TAF1LQ8IZX4 1826 aa30.76■■■□□ 2.51
SLC39A3-201ENST00000269740 VAMP4O75379 141 aa30.75■■■□□ 2.51
SLC39A3-201ENST00000269740 ZNF428Q96B54 188 aa30.75■■■□□ 2.51
SLC39A3-201ENST00000269740 STARD3NLO95772 234 aa30.74■■■□□ 2.51
SLC39A3-201ENST00000269740 DNAJC10Q8IXB1 793 aa30.74■■■□□ 2.51
SLC39A3-201ENST00000269740 CAMKK2Q96RR4 588 aa30.74■■■□□ 2.51
SLC39A3-201ENST00000269740 COL5A3P25940 1745 aaPredicted RBP30.74■■■□□ 2.51
SLC39A3-201ENST00000269740 PRAMEF22A3QJZ6 481 aa30.73■■■□□ 2.51
SLC39A3-201ENST00000269740 PROM2Q8N271 834 aa30.73■■■□□ 2.51
SLC39A3-201ENST00000269740 USP16Q9Y5T5 823 aa30.73■■■□□ 2.51
SLC39A3-201ENST00000269740 ITPK1Q13572 414 aa30.73■■■□□ 2.51
SLC39A3-201ENST00000269740 EN1Q05925 392 aaPredicted RBP30.72■■■□□ 2.51
SLC39A3-201ENST00000269740 CACNA1FO60840 1977 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms