RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 GNAT3A8MTJ3 354 aa9.61□□□□□ -0.87
DEPDC1B-201ENST00000265036 PLSCR1O15162 318 aa9.61□□□□□ -0.87
DEPDC1B-201ENST00000265036 RNMTO43148 476 aaKnown RBP9.61□□□□□ -0.87
DEPDC1B-201ENST00000265036 NEFMP07197 916 aa9.61□□□□□ -0.87
DEPDC1B-201ENST00000265036 HSP90AB1P08238 724 aaKnown RBP9.61□□□□□ -0.87
DEPDC1B-201ENST00000265036 PTCD1O75127 700 aaKnown RBP9.6□□□□□ -0.87
DEPDC1B-201ENST00000265036 IL17REQ8NFR9 667 aa9.6□□□□□ -0.87
DEPDC1B-201ENST00000265036 CCNL1Q9UK58 526 aaPredicted RBP9.6□□□□□ -0.87
DEPDC1B-201ENST00000265036 PLEKHG2Q9H7P9 1386 aa9.6□□□□□ -0.87
DEPDC1B-201ENST00000265036 ADAMTS7Q9UKP4 1686 aa9.6□□□□□ -0.87
DEPDC1B-201ENST00000265036 FAM9BQ8IZU0 186 aa9.6□□□□□ -0.87
DEPDC1B-201ENST00000265036 RBM42Q9BTD8 480 aaKnown RBP9.6□□□□□ -0.87
DEPDC1B-201ENST00000265036 C5P01031 1676 aa9.6□□□□□ -0.87
DEPDC1B-201ENST00000265036 TEFQ10587 303 aa9.59□□□□□ -0.87
DEPDC1B-201ENST00000265036 PDGFDQ9GZP0 370 aaPredicted RBP9.59□□□□□ -0.87
DEPDC1B-201ENST00000265036 SLC52A2Q9HAB3 445 aa9.59□□□□□ -0.87
DEPDC1B-201ENST00000265036 ATG3Q9NT62 314 aa9.59□□□□□ -0.87
DEPDC1B-201ENST00000265036 TAF1LQ8IZX4 1826 aa9.59□□□□□ -0.87
DEPDC1B-201ENST00000265036 TUBGCP6Q96RT7 1819 aa9.59□□□□□ -0.87
DEPDC1B-201ENST00000265036 SIPA1L3O60292 1781 aaPredicted RBP9.59□□□□□ -0.87
DEPDC1B-201ENST00000265036 MRC1P22897 1456 aa9.59□□□□□ -0.87
DEPDC1B-201ENST00000265036 ERVV-2B6SEH9 535 aa9.59□□□□□ -0.87
DEPDC1B-201ENST00000265036 SMIM5Q71RC9 77 aa9.59□□□□□ -0.87
DEPDC1B-201ENST00000265036 RTF1Q92541 710 aaKnown RBP9.59□□□□□ -0.87
DEPDC1B-201ENST00000265036 PAPPAQ13219 1627 aa9.58□□□□□ -0.88
DEPDC1B-201ENST00000265036 NFE2L2Q16236 605 aa9.58□□□□□ -0.88
DEPDC1B-201ENST00000265036 ZNF827Q17R98 1081 aa9.58□□□□□ -0.88
DEPDC1B-201ENST00000265036 MIS18AQ9NYP9 233 aa9.58□□□□□ -0.88
DEPDC1B-201ENST00000265036 SALL2Q9Y467 1007 aaPredicted RBP9.58□□□□□ -0.88
DEPDC1B-201ENST00000265036 LOC102724428A0A0B4J2F2 783 aa9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 SIK1P57059 783 aa9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 RIPK4P57078 832 aa9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 SLC4A9Q96Q91 983 aa9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 APAF1O14727 1248 aa9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 KCNQ3O43525 872 aa9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 ATP6V1AP38606 617 aa9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 TMPOP42166 694 aaKnown RBP9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 ITPK1Q13572 414 aa9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 MIER1Q8N108 512 aa9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 PNISRQ8TF01 805 aaKnown RBP9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 RUNDC1Q96C34 613 aa9.57□□□□□ -0.88
DEPDC1B-201ENST00000265036 CEMIPQ8WUJ3 1361 aa9.56□□□□□ -0.88
DEPDC1B-201ENST00000265036 C4BP0C0L5 1744 aa9.56□□□□□ -0.88
DEPDC1B-201ENST00000265036 TJP1Q07157 1748 aa9.56□□□□□ -0.88
DEPDC1B-201ENST00000265036 AMIGO3Q86WK7 504 aa9.56□□□□□ -0.88
DEPDC1B-201ENST00000265036 LINC00116Q8NCU8 138 aa9.56□□□□□ -0.88
DEPDC1B-201ENST00000265036 MYH14Q7Z406 1995 aaKnown RBP9.55□□□□□ -0.88
DEPDC1B-201ENST00000265036 UBR2Q8IWV8 1755 aa9.55□□□□□ -0.88
DEPDC1B-201ENST00000265036 KCPQ6ZWJ8 1503 aa9.55□□□□□ -0.88
DEPDC1B-201ENST00000265036 PHF14O94880 888 aa9.55□□□□□ -0.88
DEPDC1B-201ENST00000265036 NBPF14Q5TI25 921 aa9.55□□□□□ -0.88
DEPDC1B-201ENST00000265036 SMARCC1Q92922 1105 aaPredicted RBP9.55□□□□□ -0.88
DEPDC1B-201ENST00000265036 STK32BQ9NY57 414 aa9.55□□□□□ -0.88
DEPDC1B-201ENST00000265036 SLC15A2Q16348 729 aa9.55□□□□□ -0.88
DEPDC1B-201ENST00000265036 SLC27A3Q5K4L6 730 aa9.55□□□□□ -0.88
DEPDC1B-201ENST00000265036 TTC5Q8N0Z6 440 aa9.55□□□□□ -0.88
DEPDC1B-201ENST00000265036 PNNQ9H307 717 aaKnown RBP9.55□□□□□ -0.88
DEPDC1B-201ENST00000265036 COL5A3P25940 1745 aaPredicted RBP9.54□□□□□ -0.88
DEPDC1B-201ENST00000265036 BTBD11A6QL63 1104 aa9.54□□□□□ -0.88
DEPDC1B-201ENST00000265036 ZNF496Q96IT1 587 aaPredicted RBP9.54□□□□□ -0.88
DEPDC1B-201ENST00000265036 TFCP2L1Q9NZI6 479 aa9.54□□□□□ -0.88
DEPDC1B-201ENST00000265036 LAS1LQ9Y4W2 734 aaKnown RBP9.54□□□□□ -0.88
DEPDC1B-201ENST00000265036 MSH5O43196 834 aa9.54□□□□□ -0.88
DEPDC1B-201ENST00000265036 DNAJC10Q8IXB1 793 aa9.54□□□□□ -0.88
DEPDC1B-201ENST00000265036 UBR3Q6ZT12 1888 aa9.54□□□□□ -0.88
DEPDC1B-201ENST00000265036 PRAMEF22A3QJZ6 481 aa9.53□□□□□ -0.88
DEPDC1B-201ENST00000265036 ZBTB7AO95365 584 aa9.53□□□□□ -0.88
DEPDC1B-201ENST00000265036 ZNF790Q6PG37 636 aa9.53□□□□□ -0.88
DEPDC1B-201ENST00000265036 TRIM35Q9UPQ4 493 aa9.53□□□□□ -0.88
DEPDC1B-201ENST00000265036 KDM3BQ7LBC6 1761 aa9.53□□□□□ -0.88
DEPDC1B-201ENST00000265036 GNPATO15228 680 aa9.53□□□□□ -0.88
DEPDC1B-201ENST00000265036 PIP4K2AP48426 406 aaPredicted RBP9.53□□□□□ -0.88
DEPDC1B-201ENST00000265036 AK7Q96M32 723 aa9.53□□□□□ -0.88
DEPDC1B-201ENST00000265036 AKT1S1Q96B36 256 aa9.52□□□□□ -0.89
DEPDC1B-201ENST00000265036 PNPLA7Q6ZV29 1317 aa9.52□□□□□ -0.89
DEPDC1B-201ENST00000265036 CASZ1Q86V15 1759 aa9.52□□□□□ -0.89
DEPDC1B-201ENST00000265036 ZNF330Q9Y3S2 320 aaPredicted RBP9.51□□□□□ -0.89
DEPDC1B-201ENST00000265036 MSL1Q68DK7 614 aa9.51□□□□□ -0.89
DEPDC1B-201ENST00000265036 TAF7Q15545 349 aaPredicted RBP9.5□□□□□ -0.89
DEPDC1B-201ENST00000265036 KRT24Q2M2I5 525 aa9.5□□□□□ -0.89
DEPDC1B-201ENST00000265036 TSPYL4Q9UJ04 414 aa9.5□□□□□ -0.89
DEPDC1B-201ENST00000265036 C4AP0C0L4 1744 aa9.5□□□□□ -0.89
DEPDC1B-201ENST00000265036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.5□□□□□ -0.89
DEPDC1B-201ENST00000265036 HTATSF1O43719 755 aaKnown RBP9.5□□□□□ -0.89
DEPDC1B-201ENST00000265036 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
DEPDC1B-201ENST00000265036 ATF5Q9Y2D1 282 aaPredicted RBP9.5□□□□□ -0.89
DEPDC1B-201ENST00000265036 HEG1Q9ULI3 1381 aa9.5□□□□□ -0.89
DEPDC1B-201ENST00000265036 LMOD3Q0VAK6 560 aa9.49□□□□□ -0.89
DEPDC1B-201ENST00000265036 FMNL2Q96PY5 1086 aa9.49□□□□□ -0.89
DEPDC1B-201ENST00000265036 ZBTB1Q9Y2K1 713 aa9.49□□□□□ -0.89
DEPDC1B-201ENST00000265036 ZNF831Q5JPB2 1677 aa9.49□□□□□ -0.89
DEPDC1B-201ENST00000265036 COL23A1Q86Y22 540 aaPredicted RBP9.49□□□□□ -0.89
DEPDC1B-201ENST00000265036 QSER1Q2KHR3 1735 aa9.48□□□□□ -0.89
DEPDC1B-201ENST00000265036 CANXP27824 592 aaKnown RBP9.48□□□□□ -0.89
DEPDC1B-201ENST00000265036 CICQ96RK0 1608 aaPredicted RBP9.48□□□□□ -0.89
DEPDC1B-201ENST00000265036 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
DEPDC1B-201ENST00000265036 USP16Q9Y5T5 823 aa9.48□□□□□ -0.89
DEPDC1B-201ENST00000265036 CCER2I3L3R5 266 aa9.47□□□□□ -0.89
DEPDC1B-201ENST00000265036 A1BGP04217 495 aa9.47□□□□□ -0.89
DEPDC1B-201ENST00000265036 CYP19A1P11511 503 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms