RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 A0A087WZG4 1122 aa10.27□□□□□ -0.77
GTF3C3-201ENST00000263956 PRIM1P49642 420 aaKnown RBP10.27□□□□□ -0.77
GTF3C3-201ENST00000263956 THRAP3Q9Y2W1 955 aaKnown RBP10.27□□□□□ -0.77
GTF3C3-201ENST00000263956 PHKG2P15735 406 aa10.26□□□□□ -0.77
GTF3C3-201ENST00000263956 RXRBP28702 533 aa10.26□□□□□ -0.77
GTF3C3-201ENST00000263956 LGR6Q9HBX8 967 aa10.26□□□□□ -0.77
GTF3C3-201ENST00000263956 ERVV-2B6SEH9 535 aa10.26□□□□□ -0.77
GTF3C3-201ENST00000263956 SLC52A2Q9HAB3 445 aa10.26□□□□□ -0.77
GTF3C3-201ENST00000263956 AFF2P51816 1311 aa10.26□□□□□ -0.77
GTF3C3-201ENST00000263956 FLIIQ13045 1269 aa10.26□□□□□ -0.77
GTF3C3-201ENST00000263956 RTL5Q5HYW3 569 aaPredicted RBP10.26□□□□□ -0.77
GTF3C3-201ENST00000263956 BICDL1Q6ZP65 573 aa10.26□□□□□ -0.77
GTF3C3-201ENST00000263956 ZNF790Q6PG37 636 aa10.25□□□□□ -0.77
GTF3C3-201ENST00000263956 DNAAF4Q8WXU2 420 aa10.25□□□□□ -0.77
GTF3C3-201ENST00000263956 AXIN2Q9Y2T1 843 aa10.25□□□□□ -0.77
GTF3C3-201ENST00000263956 PTPRCP08575 1304 aa10.25□□□□□ -0.77
GTF3C3-201ENST00000263956 SOS1Q07889 1333 aaPredicted RBP10.25□□□□□ -0.77
GTF3C3-201ENST00000263956 MVPQ14764 893 aaKnown RBP10.24□□□□□ -0.77
GTF3C3-201ENST00000263956 C8orf58Q8NAV2 365 aa10.24□□□□□ -0.77
GTF3C3-201ENST00000263956 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
GTF3C3-201ENST00000263956 IFIT2P09913 472 aaKnown RBP10.24□□□□□ -0.77
GTF3C3-201ENST00000263956 MYD88Q99836 296 aa10.24□□□□□ -0.77
GTF3C3-201ENST00000263956 TRIM35Q9UPQ4 493 aa10.24□□□□□ -0.77
GTF3C3-201ENST00000263956 LRRC7Q96NW7 1537 aa10.24□□□□□ -0.77
GTF3C3-201ENST00000263956 RFC4P35249 363 aa10.24□□□□□ -0.77
GTF3C3-201ENST00000263956 KIAA1211Q6ZU35 1233 aa10.24□□□□□ -0.77
GTF3C3-201ENST00000263956 ZBTB3Q9H5J0 574 aa10.24□□□□□ -0.77
GTF3C3-201ENST00000263956 MYO5BQ9ULV0 1848 aa10.23□□□□□ -0.77
GTF3C3-201ENST00000263956 KAT6BQ8WYB5 2073 aa10.23□□□□□ -0.77
GTF3C3-201ENST00000263956 CHL1O00533 1208 aa10.23□□□□□ -0.77
GTF3C3-201ENST00000263956 SURF6O75683 361 aaKnown RBP10.23□□□□□ -0.77
GTF3C3-201ENST00000263956 CHPF2Q9P2E5 772 aa10.23□□□□□ -0.77
GTF3C3-201ENST00000263956 USP19O94966 1318 aa10.23□□□□□ -0.77
GTF3C3-201ENST00000263956 ANXA1P04083 346 aa10.22□□□□□ -0.77
GTF3C3-201ENST00000263956 ANKRD13DQ6ZTN6 518 aa10.22□□□□□ -0.77
GTF3C3-201ENST00000263956 VPS37DQ86XT2 251 aa10.22□□□□□ -0.77
GTF3C3-201ENST00000263956 TMEM57Q8N5G2 664 aa10.22□□□□□ -0.77
GTF3C3-201ENST00000263956 IL17REQ8NFR9 667 aa10.22□□□□□ -0.77
GTF3C3-201ENST00000263956 PPP1R1BQ9UD71 204 aaPredicted RBP10.22□□□□□ -0.77
GTF3C3-201ENST00000263956 F6X3S4 739 aa10.22□□□□□ -0.77
GTF3C3-201ENST00000263956 HOXB7P09629 217 aa10.22□□□□□ -0.77
GTF3C3-201ENST00000263956 CCNL1Q9UK58 526 aaPredicted RBP10.22□□□□□ -0.77
GTF3C3-201ENST00000263956 COPS6Q7L5N1 327 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 XAGE3Q8WTP9 111 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 PLEKHF1Q96S99 279 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 OVOS2A0A0J9YW53 1432 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 OVOS2Q6IE36 1432 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 PI4KAP2A4QPH2 592 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 VAMP4O75379 141 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 PHF14O94880 888 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 MCCP23508 829 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 CCDC57Q2TAC2 916 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 NBPF14Q5TI25 921 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 FAM196AQ6ZSG2 479 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 SEPT12Q8IYM1 358 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 PI4KAP1Q8N8J0 262 aa10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 RTCBQ9Y3I0 505 aaKnown RBP10.21□□□□□ -0.77
GTF3C3-201ENST00000263956 TRMT112Q9UI30 125 aaKnown RBP10.21□□□□□ -0.78
GTF3C3-201ENST00000263956 MAP3K2Q9Y2U5 619 aa10.21□□□□□ -0.78
GTF3C3-201ENST00000263956 KRT27Q7Z3Y8 459 aa10.21□□□□□ -0.78
GTF3C3-201ENST00000263956 ARHGAP45Q92619 1136 aa10.21□□□□□ -0.78
GTF3C3-201ENST00000263956 C1orf115Q9H7X2 142 aa10.21□□□□□ -0.78
GTF3C3-201ENST00000263956 CNNM1Q9NRU3 951 aa10.21□□□□□ -0.78
GTF3C3-201ENST00000263956 ARHGEF28Q8N1W1 1705 aaKnown RBP10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 KRT24Q2M2I5 525 aa10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 LRRFIP1Q32MZ4 808 aaKnown RBP10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 ERC1Q8IUD2 1116 aa10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 NEUROD6Q96NK8 337 aa10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 CLASRPQ8N2M8 674 aaKnown RBP10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 TSPYL6Q8N831 410 aa10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 GPTP24298 496 aa10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 RBM6P78332 1123 aaKnown RBP10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 RPAP2Q8IXW5 612 aaPredicted RBP10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 MPHOSPH8Q99549 860 aa10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 DDX21Q9NR30 783 aaKnown RBP eCLIP10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 TFCP2L1Q9NZI6 479 aa10.2□□□□□ -0.78
GTF3C3-201ENST00000263956 APBA3O96018 575 aa10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 BAG6P46379 1132 aa10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 FGD1P98174 961 aa10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 PPP1R42Q7Z4L9 355 aa10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 ZNF496Q96IT1 587 aaPredicted RBP10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 GJD4Q96KN9 370 aaPredicted RBP10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 CWC25Q9NXE8 425 aaPredicted RBP10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 SRGAP3O43295 1099 aa10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 TRIM27P14373 513 aa10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 BECN1Q14457 450 aa10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 VPS72Q15906 364 aa10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 KSR2Q6VAB6 950 aa10.19□□□□□ -0.78
GTF3C3-201ENST00000263956 CRB1P82279 1406 aa10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 PNPLA6Q8IY17 1366 aa10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 DCAF8L1A6NGE4 600 aa10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 DZIP3Q86Y13 1208 aaKnown RBP10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 MRPL50Q8N5N7 158 aaKnown RBP10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 ATP5J2-PTCD1G3V325 749 aa10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 EIF4A1P60842 406 aaKnown RBP10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 DNAJC10Q8IXB1 793 aa10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 GCC1Q96CN9 775 aa10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 ERC2O15083 957 aa10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 RILPL2Q969X0 211 aa10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 LNPKQ9C0E8 428 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms