RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 LRRFIP2Q9Y608 721 aaKnown RBP15.07■□□□□ 0
CHMP3-201ENST00000263856 UNC5CLQ8IV45 518 aa15.07■□□□□ 0
CHMP3-201ENST00000263856 ESYT1Q9BSJ8 1104 aa15.07■□□□□ 0
CHMP3-201ENST00000263856 ZMYND15Q9H091 742 aa15.07■□□□□ 0
CHMP3-201ENST00000263856 LRSAM1Q6UWE0 723 aa15.06■□□□□ 0
CHMP3-201ENST00000263856 OFD1O75665 1012 aa15.06■□□□□ 0
CHMP3-201ENST00000263856 EIF2S2P20042 333 aaKnown RBP15.06■□□□□ 0
CHMP3-201ENST00000263856 CLEC17AQ6ZS10 378 aa15.06■□□□□ 0
CHMP3-201ENST00000263856 TTC21BQ7Z4L5 1316 aa15.06■□□□□ 0
CHMP3-201ENST00000263856 CLTCQ00610 1675 aaKnown RBP15.05■□□□□ 0
CHMP3-201ENST00000263856 CDC42BPGQ6DT37 1551 aa15.05■□□□□ 0
CHMP3-201ENST00000263856 RGS12O14924 1447 aa15.05■□□□□ 0
CHMP3-201ENST00000263856 MAP3K19Q56UN5 1328 aa15.05■□□□□ -0
CHMP3-201ENST00000263856 GADD45BO75293 160 aaPredicted RBP15.05■□□□□ -0
CHMP3-201ENST00000263856 CCT4P50991 539 aaKnown RBP15.05■□□□□ -0
CHMP3-201ENST00000263856 UQCRHLA0A096LP55 91 aa15.05■□□□□ -0
CHMP3-201ENST00000263856 UQCRHP07919 91 aa15.05■□□□□ -0
CHMP3-201ENST00000263856 DDX54Q8TDD1 881 aaKnown RBP15.05■□□□□ -0
CHMP3-201ENST00000263856 ZNF830Q96NB3 372 aaPredicted RBP15.05■□□□□ -0
CHMP3-201ENST00000263856 SLC26A8Q96RN1 970 aa15.05■□□□□ -0
CHMP3-201ENST00000263856 FLIIQ13045 1269 aa15.04■□□□□ -0
CHMP3-201ENST00000263856 NEO1Q92859 1461 aa15.04■□□□□ -0
CHMP3-201ENST00000263856 NGDNQ8NEJ9 315 aaKnown RBP15.04■□□□□ -0
CHMP3-201ENST00000263856 CPSF1Q10570 1443 aaKnown RBP15.04■□□□□ -0
CHMP3-201ENST00000263856 SURF6O75683 361 aaKnown RBP15.03■□□□□ -0
CHMP3-201ENST00000263856 PKNOX2Q96KN3 472 aa15.03■□□□□ -0
CHMP3-201ENST00000263856 TSPY26PQ9H489 355 aa15.03■□□□□ -0
CHMP3-201ENST00000263856 CHMLP26374 656 aa15.03■□□□□ -0
CHMP3-201ENST00000263856 OS9Q13438 667 aaPredicted RBP15.03■□□□□ -0
CHMP3-201ENST00000263856 AATKQ6ZMQ8 1374 aa15.03■□□□□ -0
CHMP3-201ENST00000263856 IBTKQ9P2D0 1353 aaPredicted RBP15.03■□□□□ -0
CHMP3-201ENST00000263856 MBD3O95983 291 aa15.02■□□□□ -0
CHMP3-201ENST00000263856 IL25Q9H293 177 aa15.02■□□□□ -0
CHMP3-201ENST00000263856 CPA1P15085 419 aa15.02□□□□□ -0.01
CHMP3-201ENST00000263856 USHBP1Q8N6Y0 703 aa15.02□□□□□ -0.01
CHMP3-201ENST00000263856 NOL7Q9UMY1 257 aaKnown RBP15.02□□□□□ -0.01
CHMP3-201ENST00000263856 CHMP3Q9Y3E7 222 aa15.02□□□□□ -0.01
CHMP3-201ENST00000263856 FIBPO43427 364 aa15.01□□□□□ -0.01
CHMP3-201ENST00000263856 UBTFL1P0CB47 393 aaPredicted RBP15.01□□□□□ -0.01
CHMP3-201ENST00000263856 KIF24Q5T7B8 1368 aa15.01□□□□□ -0.01
CHMP3-201ENST00000263856 ZKSCAN5Q9Y2L8 839 aa15.01□□□□□ -0.01
CHMP3-201ENST00000263856 A2ML1A8K2U0 1454 aa15.01□□□□□ -0.01
CHMP3-201ENST00000263856 GNAI3P08754 354 aa15□□□□□ -0.01
CHMP3-201ENST00000263856 USP48Q86UV5 1035 aa15□□□□□ -0.01
CHMP3-201ENST00000263856 SYAP1Q96A49 352 aaPredicted RBP15□□□□□ -0.01
CHMP3-201ENST00000263856 EIF2AK3Q9NZJ5 1116 aaKnown RBP15□□□□□ -0.01
CHMP3-201ENST00000263856 CCDC39Q9UFE4 941 aa15□□□□□ -0.01
CHMP3-201ENST00000263856 USP25Q9UHP3 1055 aa15□□□□□ -0.01
CHMP3-201ENST00000263856 ANXA1P04083 346 aa15□□□□□ -0.01
CHMP3-201ENST00000263856 BRD1O95696 1058 aa14.99□□□□□ -0.01
CHMP3-201ENST00000263856 CWC27Q6UX04 472 aaKnown RBP14.99□□□□□ -0.01
CHMP3-201ENST00000263856 C17orf53Q8N3J3 647 aaPredicted RBP14.99□□□□□ -0.01
CHMP3-201ENST00000263856 PHAXQ9H814 394 aaKnown RBP14.99□□□□□ -0.01
CHMP3-201ENST00000263856 SPG7Q9UQ90 795 aa14.99□□□□□ -0.01
CHMP3-201ENST00000263856 CNPY2Q9Y2B0 182 aa14.99□□□□□ -0.01
CHMP3-201ENST00000263856 CCDC30Q5VVM6 783 aa14.99□□□□□ -0.01
CHMP3-201ENST00000263856 EYA1Q99502 592 aa14.99□□□□□ -0.01
CHMP3-201ENST00000263856 TSPOAP1O95153 1857 aa14.99□□□□□ -0.01
CHMP3-201ENST00000263856 JARID2Q92833 1246 aaPredicted RBP14.98□□□□□ -0.01
CHMP3-201ENST00000263856 KIAA0232Q92628 1395 aa14.98□□□□□ -0.01
CHMP3-201ENST00000263856 MCM2P49736 904 aa14.98□□□□□ -0.01
CHMP3-201ENST00000263856 NLRP6P59044 892 aa14.98□□□□□ -0.01
CHMP3-201ENST00000263856 HDGFL1Q5TGJ6 251 aa14.97□□□□□ -0.01
CHMP3-201ENST00000263856 PDCL3Q9H2J4 239 aa14.97□□□□□ -0.01
CHMP3-201ENST00000263856 SRGAP3O43295 1099 aa14.97□□□□□ -0.01
CHMP3-201ENST00000263856 HCLS1P14317 486 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-201ENST00000263856 ATP8B2P98198 1209 aa14.97□□□□□ -0.01
CHMP3-201ENST00000263856 PDLIM2Q96JY6 352 aa14.97□□□□□ -0.01
CHMP3-201ENST00000263856 RIMS1Q86UR5 1692 aaKnown RBP14.97□□□□□ -0.01
CHMP3-201ENST00000263856 TSC1Q92574 1164 aa14.97□□□□□ -0.01
CHMP3-201ENST00000263856 RICTORQ6R327 1708 aa14.97□□□□□ -0.01
CHMP3-201ENST00000263856 FAM177BA6PVY3 158 aa14.96□□□□□ -0.01
CHMP3-201ENST00000263856 PPP1R42Q7Z4L9 355 aa14.96□□□□□ -0.01
CHMP3-201ENST00000263856 SRCIN1Q9C0H9 1055 aa14.96□□□□□ -0.01
CHMP3-201ENST00000263856 OSBPL3Q9H4L5 887 aa14.96□□□□□ -0.01
CHMP3-201ENST00000263856 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.96□□□□□ -0.01
CHMP3-201ENST00000263856 ROBO2Q9HCK4 1378 aa14.96□□□□□ -0.01
CHMP3-201ENST00000263856 VPS37CA5D8V6 355 aaPredicted RBP14.96□□□□□ -0.01
CHMP3-201ENST00000263856 TTC12Q9H892 705 aaPredicted RBP14.96□□□□□ -0.01
CHMP3-201ENST00000263856 REREQ9P2R6 1566 aa14.96□□□□□ -0.02
CHMP3-201ENST00000263856 TCHHQ07283 1943 aa14.95□□□□□ -0.02
CHMP3-201ENST00000263856 WDR33Q9C0J8 1336 aaKnown RBP14.95□□□□□ -0.02
CHMP3-201ENST00000263856 CRB1P82279 1406 aa14.95□□□□□ -0.02
CHMP3-201ENST00000263856 KCNJ4P48050 445 aa14.95□□□□□ -0.02
CHMP3-201ENST00000263856 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
CHMP3-201ENST00000263856 CCDC83Q8IWF9 413 aa14.95□□□□□ -0.02
CHMP3-201ENST00000263856 SMC3Q9UQE7 1217 aa14.95□□□□□ -0.02
CHMP3-201ENST00000263856 KIAA2012Q0VF49 1180 aa14.94□□□□□ -0.02
CHMP3-201ENST00000263856 GNAT3A8MTJ3 354 aa14.94□□□□□ -0.02
CHMP3-201ENST00000263856 PHF14O94880 888 aa14.94□□□□□ -0.02
CHMP3-201ENST00000263856 CASTP20810 708 aaKnown RBP14.94□□□□□ -0.02
CHMP3-201ENST00000263856 ZNF500O60304 480 aaPredicted RBP14.93□□□□□ -0.02
CHMP3-201ENST00000263856 AK2P54819 239 aa14.93□□□□□ -0.02
CHMP3-201ENST00000263856 USP44Q9H0E7 712 aa14.93□□□□□ -0.02
CHMP3-201ENST00000263856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.93□□□□□ -0.02
CHMP3-201ENST00000263856 CUL4AQ13619 759 aa14.93□□□□□ -0.02
CHMP3-201ENST00000263856 CSPP1Q1MSJ5 1256 aa14.93□□□□□ -0.02
CHMP3-201ENST00000263856 HS1BP3Q53T59 392 aa14.93□□□□□ -0.02
CHMP3-201ENST00000263856 GIMAP6Q6P9H5 292 aa14.93□□□□□ -0.02
CHMP3-201ENST00000263856 SPC24Q8NBT2 197 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms