RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 RGPD1P0DJD0 1748 aa16.4■□□□□ 0.22
CLNS1A-201ENST00000263309 CAMKK2Q96RR4 588 aa16.4■□□□□ 0.22
CLNS1A-201ENST00000263309 LGR6Q9HBX8 967 aa16.4■□□□□ 0.22
CLNS1A-201ENST00000263309 APAF1O14727 1248 aa16.39■□□□□ 0.21
CLNS1A-201ENST00000263309 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
CLNS1A-201ENST00000263309 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
CLNS1A-201ENST00000263309 MCM10Q7L590 875 aa16.38■□□□□ 0.21
CLNS1A-201ENST00000263309 BABAM1Q9NWV8 329 aa16.38■□□□□ 0.21
CLNS1A-201ENST00000263309 PKD1L3Q7Z443 1732 aa16.38■□□□□ 0.21
CLNS1A-201ENST00000263309 TNS1Q9HBL0 1735 aaKnown RBP16.37■□□□□ 0.21
CLNS1A-201ENST00000263309 FLAD1Q8NFF5 587 aa16.37■□□□□ 0.21
CLNS1A-201ENST00000263309 IL17REQ8NFR9 667 aa16.37■□□□□ 0.21
CLNS1A-201ENST00000263309 FMNL2Q96PY5 1086 aa16.37■□□□□ 0.21
CLNS1A-201ENST00000263309 PALLDQ8WX93 1383 aa16.37■□□□□ 0.21
CLNS1A-201ENST00000263309 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
CLNS1A-201ENST00000263309 STARD3NLO95772 234 aa16.36■□□□□ 0.21
CLNS1A-201ENST00000263309 MIER1Q8N108 512 aa16.36■□□□□ 0.21
CLNS1A-201ENST00000263309 LAS1LQ9Y4W2 734 aaKnown RBP16.36■□□□□ 0.21
CLNS1A-201ENST00000263309 LOC102724428A0A0B4J2F2 783 aa16.35■□□□□ 0.21
CLNS1A-201ENST00000263309 SIK1P57059 783 aa16.35■□□□□ 0.21
CLNS1A-201ENST00000263309 VSIG10Q8N0Z9 540 aa16.35■□□□□ 0.21
CLNS1A-201ENST00000263309 AK7Q96M32 723 aa16.35■□□□□ 0.21
CLNS1A-201ENST00000263309 ATG3Q9NT62 314 aa16.35■□□□□ 0.21
CLNS1A-201ENST00000263309 TFCP2L1Q9NZI6 479 aa16.35■□□□□ 0.21
CLNS1A-201ENST00000263309 ASAP1Q9ULH1 1129 aa16.35■□□□□ 0.21
CLNS1A-201ENST00000263309 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
CLNS1A-201ENST00000263309 GNAI1P63096 354 aa16.34■□□□□ 0.21
CLNS1A-201ENST00000263309 CCDC184Q52MB2 194 aa16.34■□□□□ 0.21
CLNS1A-201ENST00000263309 ZNF790Q6PG37 636 aa16.34■□□□□ 0.21
CLNS1A-201ENST00000263309 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
CLNS1A-201ENST00000263309 NHSQ6T4R5 1651 aa16.33■□□□□ 0.2
CLNS1A-201ENST00000263309 DCTN1Q14203 1278 aa16.32■□□□□ 0.2
CLNS1A-201ENST00000263309 CCDC27Q2M243 656 aa16.32■□□□□ 0.2
CLNS1A-201ENST00000263309 KAT6BQ8WYB5 2073 aa16.32■□□□□ 0.2
CLNS1A-201ENST00000263309 SNRPA1P09661 255 aaKnown RBP16.31■□□□□ 0.2
CLNS1A-201ENST00000263309 PTF1AQ7RTS3 328 aa16.31■□□□□ 0.2
CLNS1A-201ENST00000263309 KDM6AO15550 1401 aaPredicted RBP16.3■□□□□ 0.2
CLNS1A-201ENST00000263309 CEMIPQ8WUJ3 1361 aa16.3■□□□□ 0.2
CLNS1A-201ENST00000263309 SLC15A2Q16348 729 aa16.3■□□□□ 0.2
CLNS1A-201ENST00000263309 SLC39A6Q13433 755 aa16.29■□□□□ 0.2
CLNS1A-201ENST00000263309 WDR63Q8IWG1 891 aa16.29■□□□□ 0.2
CLNS1A-201ENST00000263309 CFAP44Q96MT7 982 aa16.29■□□□□ 0.2
CLNS1A-201ENST00000263309 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
CLNS1A-201ENST00000263309 SALL2Q9Y467 1007 aaPredicted RBP16.29■□□□□ 0.2
CLNS1A-201ENST00000263309 RC3H1Q5TC82 1133 aaKnown RBP16.28■□□□□ 0.2
CLNS1A-201ENST00000263309 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
CLNS1A-201ENST00000263309 IFT57Q9NWB7 429 aa16.28■□□□□ 0.2
CLNS1A-201ENST00000263309 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
CLNS1A-201ENST00000263309 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.2
CLNS1A-201ENST00000263309 PROM2Q8N271 834 aa16.27■□□□□ 0.2
CLNS1A-201ENST00000263309 A0A087WZG4 1122 aa16.26■□□□□ 0.19
CLNS1A-201ENST00000263309 ARXQ96QS3 562 aa16.26■□□□□ 0.19
CLNS1A-201ENST00000263309 SBF2Q86WG5 1849 aa16.26■□□□□ 0.19
CLNS1A-201ENST00000263309 SHANK3Q9BYB0 1731 aa16.25■□□□□ 0.19
CLNS1A-201ENST00000263309 IL16Q14005 1332 aa16.25■□□□□ 0.19
CLNS1A-201ENST00000263309 RREB1Q92766 1687 aa16.25■□□□□ 0.19
CLNS1A-201ENST00000263309 ADRA2BP18089 450 aa16.25■□□□□ 0.19
CLNS1A-201ENST00000263309 RFC4P35249 363 aa16.25■□□□□ 0.19
CLNS1A-201ENST00000263309 GOLGA2Q08379 1002 aa16.25■□□□□ 0.19
CLNS1A-201ENST00000263309 WWC1Q8IX03 1113 aa16.25■□□□□ 0.19
CLNS1A-201ENST00000263309 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
CLNS1A-201ENST00000263309 SLC16A10Q8TF71 515 aa16.25■□□□□ 0.19
CLNS1A-201ENST00000263309 TRIM35Q9UPQ4 493 aa16.25■□□□□ 0.19
CLNS1A-201ENST00000263309 GNPATO15228 680 aa16.24■□□□□ 0.19
CLNS1A-201ENST00000263309 ZNF496Q96IT1 587 aaPredicted RBP16.24■□□□□ 0.19
CLNS1A-201ENST00000263309 THUMPD2Q9BTF0 503 aaKnown RBP16.24■□□□□ 0.19
CLNS1A-201ENST00000263309 LRRC4BQ9NT99 713 aa16.24■□□□□ 0.19
CLNS1A-201ENST00000263309 MIS18AQ9NYP9 233 aa16.24■□□□□ 0.19
CLNS1A-201ENST00000263309 HEG1Q9ULI3 1381 aa16.24■□□□□ 0.19
CLNS1A-201ENST00000263309 CHL1O00533 1208 aa16.23■□□□□ 0.19
CLNS1A-201ENST00000263309 ZPR1O75312 459 aa16.23■□□□□ 0.19
CLNS1A-201ENST00000263309 SSFA2P28290 1259 aa16.23■□□□□ 0.19
CLNS1A-201ENST00000263309 POLD1P28340 1107 aa16.23■□□□□ 0.19
CLNS1A-201ENST00000263309 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
CLNS1A-201ENST00000263309 BTAF1O14981 1849 aa16.23■□□□□ 0.19
CLNS1A-201ENST00000263309 NUP188Q5SRE5 1749 aa16.22■□□□□ 0.19
CLNS1A-201ENST00000263309 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
CLNS1A-201ENST00000263309 RPS6KA4O75676 772 aa16.22■□□□□ 0.19
CLNS1A-201ENST00000263309 RGPD3A6NKT7 1758 aaPredicted RBP16.22■□□□□ 0.19
CLNS1A-201ENST00000263309 RGPD4Q7Z3J3 1758 aa16.22■□□□□ 0.19
CLNS1A-201ENST00000263309 CNTNAP4Q9C0A0 1308 aa16.21■□□□□ 0.19
CLNS1A-201ENST00000263309 SCN11AQ9UI33 1791 aa16.21■□□□□ 0.19
CLNS1A-201ENST00000263309 HOXB7P09629 217 aa16.21■□□□□ 0.19
CLNS1A-201ENST00000263309 CRKLP46109 303 aaKnown RBP16.21■□□□□ 0.19
CLNS1A-201ENST00000263309 KCNQ4P56696 695 aa16.21■□□□□ 0.19
CLNS1A-201ENST00000263309 EIF4A1P60842 406 aaKnown RBP16.21■□□□□ 0.19
CLNS1A-201ENST00000263309 DNAJC10Q8IXB1 793 aa16.21■□□□□ 0.19
CLNS1A-201ENST00000263309 MRC1P22897 1456 aa16.21■□□□□ 0.19
CLNS1A-201ENST00000263309 PHF14O94880 888 aa16.2■□□□□ 0.18
CLNS1A-201ENST00000263309 CANXP27824 592 aaKnown RBP16.2■□□□□ 0.18
CLNS1A-201ENST00000263309 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
CLNS1A-201ENST00000263309 SPON1Q9HCB6 807 aa16.2■□□□□ 0.18
CLNS1A-201ENST00000263309 ZNF330Q9Y3S2 320 aaPredicted RBP16.2■□□□□ 0.18
CLNS1A-201ENST00000263309 E9PSI1 815 aa16.19■□□□□ 0.18
CLNS1A-201ENST00000263309 CYP19A1P11511 503 aaPredicted RBP16.19■□□□□ 0.18
CLNS1A-201ENST00000263309 YY1P25490 414 aa16.19■□□□□ 0.18
CLNS1A-201ENST00000263309 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLNS1A-201ENST00000263309 ITPK1Q13572 414 aa16.19■□□□□ 0.18
CLNS1A-201ENST00000263309 LINC00116Q8NCU8 138 aa16.19■□□□□ 0.18
CLNS1A-201ENST00000263309 PPP1R1BQ9UD71 204 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms