RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 UPF3BQ9BZI7 483 aaKnown RBP18.54■□□□□ 0.56
TIMP2-201ENST00000262768 PNPLA6Q8IY17 1366 aa18.54■□□□□ 0.56
TIMP2-201ENST00000262768 USP19O94966 1318 aa18.54■□□□□ 0.56
TIMP2-201ENST00000262768 LRRC7Q96NW7 1537 aa18.53■□□□□ 0.56
TIMP2-201ENST00000262768 MCCP23508 829 aa18.53■□□□□ 0.56
TIMP2-201ENST00000262768 PA2G4Q9UQ80 394 aaKnown RBP18.53■□□□□ 0.56
TIMP2-201ENST00000262768 ARHGEF28Q8N1W1 1705 aaKnown RBP18.53■□□□□ 0.56
TIMP2-201ENST00000262768 ZNF853P0CG23 659 aa18.53■□□□□ 0.56
TIMP2-201ENST00000262768 AXIN2Q9Y2T1 843 aa18.53■□□□□ 0.56
TIMP2-201ENST00000262768 CPSF1Q10570 1443 aaKnown RBP18.53■□□□□ 0.56
TIMP2-201ENST00000262768 ANKRD44Q8N8A2 993 aa18.52■□□□□ 0.56
TIMP2-201ENST00000262768 DNAAF4Q8WXU2 420 aa18.52■□□□□ 0.56
TIMP2-201ENST00000262768 DDX58O95786 925 aaKnown RBP18.52■□□□□ 0.56
TIMP2-201ENST00000262768 SDSP20132 328 aa18.52■□□□□ 0.56
TIMP2-201ENST00000262768 MYO3AQ8NEV4 1616 aa18.52■□□□□ 0.56
TIMP2-201ENST00000262768 G3BP1Q13283 466 aaKnown RBP eCLIP18.51■□□□□ 0.55
TIMP2-201ENST00000262768 NEUROD6Q96NK8 337 aa18.51■□□□□ 0.55
TIMP2-201ENST00000262768 AATKQ6ZMQ8 1374 aa18.51■□□□□ 0.55
TIMP2-201ENST00000262768 BRPF3Q9ULD4 1205 aa18.51■□□□□ 0.55
TIMP2-201ENST00000262768 NBPF7P0C2Y1 421 aaPredicted RBP18.51■□□□□ 0.55
TIMP2-201ENST00000262768 PTPRCP08575 1304 aa18.51■□□□□ 0.55
TIMP2-201ENST00000262768 REC8O95072 547 aa18.5■□□□□ 0.55
TIMP2-201ENST00000262768 CWC27Q6UX04 472 aaKnown RBP18.5■□□□□ 0.55
TIMP2-201ENST00000262768 PLEKHM2Q8IWE5 1019 aa18.5■□□□□ 0.55
TIMP2-201ENST00000262768 DIAPH3Q9NSV4 1193 aa18.5■□□□□ 0.55
TIMP2-201ENST00000262768 ST18O60284 1047 aa18.5■□□□□ 0.55
TIMP2-201ENST00000262768 ADAMTS2O95450 1211 aa18.5■□□□□ 0.55
TIMP2-201ENST00000262768 PIP4K2BP78356 416 aa18.5■□□□□ 0.55
TIMP2-201ENST00000262768 MYD88Q99836 296 aa18.5■□□□□ 0.55
TIMP2-201ENST00000262768 CHMP5Q9NZZ3 219 aa18.5■□□□□ 0.55
TIMP2-201ENST00000262768 MAP3K5Q99683 1374 aa18.5■□□□□ 0.55
TIMP2-201ENST00000262768 EIF5BO60841 1220 aaKnown RBP18.5■□□□□ 0.55
TIMP2-201ENST00000262768 CCDC8Q9H0W5 538 aaPredicted RBP18.5■□□□□ 0.55
TIMP2-201ENST00000262768 BMP2KLQ5H9B9 411 aa18.49■□□□□ 0.55
TIMP2-201ENST00000262768 TAF7LQ5H9L4 462 aa18.49■□□□□ 0.55
TIMP2-201ENST00000262768 CLASRPQ8N2M8 674 aaKnown RBP18.49■□□□□ 0.55
TIMP2-201ENST00000262768 KLHDC4Q8TBB5 520 aa18.49■□□□□ 0.55
TIMP2-201ENST00000262768 IL27Q8NEV9 243 aa18.48■□□□□ 0.55
TIMP2-201ENST00000262768 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
TIMP2-201ENST00000262768 MX1P20591 662 aa18.48■□□□□ 0.55
TIMP2-201ENST00000262768 DCTPP1Q9H773 170 aa18.48■□□□□ 0.55
TIMP2-201ENST00000262768 GORABQ5T7V8 394 aa18.48■□□□□ 0.55
TIMP2-201ENST00000262768 ZBTB3Q9H5J0 574 aa18.47■□□□□ 0.55
TIMP2-201ENST00000262768 PROSER3Q2NL68 480 aa18.47■□□□□ 0.55
TIMP2-201ENST00000262768 DBF4Q9UBU7 674 aaPredicted RBP18.47■□□□□ 0.55
TIMP2-201ENST00000262768 AMOTQ4VCS5 1084 aa18.46■□□□□ 0.55
TIMP2-201ENST00000262768 CADPS2Q86UW7 1296 aa18.46■□□□□ 0.55
TIMP2-201ENST00000262768 ABCC4O15439 1325 aa18.46■□□□□ 0.55
TIMP2-201ENST00000262768 PLCB2Q00722 1185 aa18.46■□□□□ 0.55
TIMP2-201ENST00000262768 COPS6Q7L5N1 327 aa18.46■□□□□ 0.55
TIMP2-201ENST00000262768 AACSQ86V21 672 aa18.46■□□□□ 0.55
TIMP2-201ENST00000262768 IGSF1Q8N6C5 1336 aa18.46■□□□□ 0.55
TIMP2-201ENST00000262768 TTC22Q5TAA0 569 aa18.46■□□□□ 0.55
TIMP2-201ENST00000262768 AKAP4Q5JQC9 854 aa18.45■□□□□ 0.54
TIMP2-201ENST00000262768 DNAJC2Q99543 621 aaKnown RBP18.45■□□□□ 0.54
TIMP2-201ENST00000262768 GBP4Q96PP9 640 aa18.45■□□□□ 0.54
TIMP2-201ENST00000262768 PIK3R4Q99570 1358 aa18.45■□□□□ 0.54
TIMP2-201ENST00000262768 AGLP35573 1532 aa18.45■□□□□ 0.54
TIMP2-201ENST00000262768 RNMTO43148 476 aaKnown RBP18.45■□□□□ 0.54
TIMP2-201ENST00000262768 NPHP1O15259 732 aa18.44■□□□□ 0.54
TIMP2-201ENST00000262768 GSPT1P15170 499 aaKnown RBP18.44■□□□□ 0.54
TIMP2-201ENST00000262768 XAGE3Q8WTP9 111 aa18.44■□□□□ 0.54
TIMP2-201ENST00000262768 PDE1AP54750 535 aa18.44■□□□□ 0.54
TIMP2-201ENST00000262768 IQSEC2Q5JU85 1478 aa18.44■□□□□ 0.54
TIMP2-201ENST00000262768 CHMP4AQ9BY43 222 aa18.44■□□□□ 0.54
TIMP2-201ENST00000262768 BOLA2Q9H3K6 86 aa18.44■□□□□ 0.54
TIMP2-201ENST00000262768 CDK12Q9NYV4 1490 aaPredicted RBP18.43■□□□□ 0.54
TIMP2-201ENST00000262768 ERC2O15083 957 aa18.43■□□□□ 0.54
TIMP2-201ENST00000262768 MCTP1Q6DN14 999 aa18.43■□□□□ 0.54
TIMP2-201ENST00000262768 UBE3BQ7Z3V4 1068 aa18.43■□□□□ 0.54
TIMP2-201ENST00000262768 GPATCH3Q96I76 525 aa18.43■□□□□ 0.54
TIMP2-201ENST00000262768 DDX49Q9Y6V7 483 aaKnown RBP18.43■□□□□ 0.54
TIMP2-201ENST00000262768 TMEM94Q12767 1356 aa18.42■□□□□ 0.54
TIMP2-201ENST00000262768 ANP32BQ92688 251 aaKnown RBP18.42■□□□□ 0.54
TIMP2-201ENST00000262768 MAP2P11137 1827 aaKnown RBP18.42■□□□□ 0.54
TIMP2-201ENST00000262768 SPATA31D1Q6ZQQ2 1576 aa18.42■□□□□ 0.54
TIMP2-201ENST00000262768 EIF4A1P60842 406 aaKnown RBP18.42■□□□□ 0.54
TIMP2-201ENST00000262768 FOSBP53539 338 aa18.41■□□□□ 0.54
TIMP2-201ENST00000262768 USP44Q9H0E7 712 aa18.41■□□□□ 0.54
TIMP2-201ENST00000262768 K7ELQ4 463 aaPredicted RBP18.41■□□□□ 0.54
TIMP2-201ENST00000262768 IFNL2Q8IZJ0 200 aa18.41■□□□□ 0.54
TIMP2-201ENST00000262768 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.4■□□□□ 0.54
TIMP2-201ENST00000262768 ARHGEF25Q86VW2 580 aa18.4■□□□□ 0.54
TIMP2-201ENST00000262768 FSD1Q9BTV5 496 aa18.4■□□□□ 0.54
TIMP2-201ENST00000262768 NDUFB9Q9Y6M9 179 aa18.4■□□□□ 0.54
TIMP2-201ENST00000262768 ZNF496Q96IT1 587 aaPredicted RBP18.39■□□□□ 0.54
TIMP2-201ENST00000262768 NPHP3Q7Z494 1330 aa18.39■□□□□ 0.53
TIMP2-201ENST00000262768 TRAK2O60296 914 aa18.39■□□□□ 0.53
TIMP2-201ENST00000262768 USP16Q9Y5T5 823 aa18.39■□□□□ 0.53
TIMP2-201ENST00000262768 RTL1A6NKG5 1358 aa18.39■□□□□ 0.53
TIMP2-201ENST00000262768 ARHGEF10O15013 1369 aa18.39■□□□□ 0.53
TIMP2-201ENST00000262768 RHPN1Q8TCX5 695 aa18.39■□□□□ 0.53
TIMP2-201ENST00000262768 A0A087WZG4 1122 aa18.38■□□□□ 0.53
TIMP2-201ENST00000262768 IFT172Q9UG01 1749 aa18.38■□□□□ 0.53
TIMP2-201ENST00000262768 GPTP24298 496 aa18.38■□□□□ 0.53
TIMP2-201ENST00000262768 ATP8B2P98198 1209 aa18.38■□□□□ 0.53
TIMP2-201ENST00000262768 GOLGA6L3A6NEY3 463 aa18.38■□□□□ 0.53
TIMP2-201ENST00000262768 SSFA2P28290 1259 aa18.38■□□□□ 0.53
TIMP2-201ENST00000262768 CD2BP2O95400 341 aaKnown RBP18.37■□□□□ 0.53
TIMP2-201ENST00000262768 PPFIA3O75145 1194 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms