RNA–Protein interactions for RNA: ENST00000262717.8

CDH20-201, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDH20, Length 3,882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-201ENST00000262717 JARID2Q92833 1246 aaPredicted RBP17.85■□□□□ 0.45
CDH20-201ENST00000262717 PHF8Q9UPP1 1060 aa17.85■□□□□ 0.45
CDH20-201ENST00000262717 ARHGEF28Q8N1W1 1705 aaKnown RBP17.85■□□□□ 0.45
CDH20-201ENST00000262717 SIGLEC1Q9BZZ2 1709 aa17.85■□□□□ 0.45
CDH20-201ENST00000262717 RAB3GAP1Q15042 981 aa17.85■□□□□ 0.45
CDH20-201ENST00000262717 CHPF2Q9P2E5 772 aa17.85■□□□□ 0.45
CDH20-201ENST00000262717 IFIT2P09913 472 aaKnown RBP17.84■□□□□ 0.45
CDH20-201ENST00000262717 LGR6Q9HBX8 967 aa17.84■□□□□ 0.45
CDH20-201ENST00000262717 FGD1P98174 961 aa17.84■□□□□ 0.45
CDH20-201ENST00000262717 SPG7Q9UQ90 795 aa17.84■□□□□ 0.45
CDH20-201ENST00000262717 RTL1A6NKG5 1358 aa17.84■□□□□ 0.45
CDH20-201ENST00000262717 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.83■□□□□ 0.45
CDH20-201ENST00000262717 HOXC9P31274 260 aa17.83■□□□□ 0.45
CDH20-201ENST00000262717 PIP4K2AP48426 406 aaPredicted RBP17.83■□□□□ 0.45
CDH20-201ENST00000262717 ATP7BP35670 1465 aa17.83■□□□□ 0.45
CDH20-201ENST00000262717 CPS1P31327 1500 aa17.83■□□□□ 0.45
CDH20-201ENST00000262717 FLT4P35916 1363 aa17.83■□□□□ 0.44
CDH20-201ENST00000262717 KCNQ3O43525 872 aa17.83■□□□□ 0.44
CDH20-201ENST00000262717 PTMSP20962 102 aa17.82■□□□□ 0.44
CDH20-201ENST00000262717 DNTTIP2Q5QJE6 756 aaKnown RBP17.82■□□□□ 0.44
CDH20-201ENST00000262717 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
CDH20-201ENST00000262717 IL17REQ8NFR9 667 aa17.82■□□□□ 0.44
CDH20-201ENST00000262717 PIK3R4Q99570 1358 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 PLEKHG3A1L390 1219 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 GAS2L3Q86XJ1 694 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 MYO5BQ9ULV0 1848 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 MYO3AQ8NEV4 1616 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 RIC3Q7Z5B4 369 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 KIF2CQ99661 725 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 SYCE3A1L190 88 aa17.8■□□□□ 0.44
CDH20-201ENST00000262717 VPS37CA5D8V6 355 aaPredicted RBP17.8■□□□□ 0.44
CDH20-201ENST00000262717 PA2G4Q9UQ80 394 aaKnown RBP17.8■□□□□ 0.44
CDH20-201ENST00000262717 CLASRPQ8N2M8 674 aaKnown RBP17.79■□□□□ 0.44
CDH20-201ENST00000262717 TMX3Q96JJ7 454 aa17.79■□□□□ 0.44
CDH20-201ENST00000262717 AATKQ6ZMQ8 1374 aa17.79■□□□□ 0.44
CDH20-201ENST00000262717 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
CDH20-201ENST00000262717 NLRP1Q9C000 1473 aa17.79■□□□□ 0.44
CDH20-201ENST00000262717 FOSBP53539 338 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 CPA1P15085 419 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 PLEKHO1Q53GL0 409 aaPredicted RBP17.78■□□□□ 0.44
CDH20-201ENST00000262717 IFT172Q9UG01 1749 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 ESPNB1AK53 854 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 NBPF7P0C2Y1 421 aaPredicted RBP17.78■□□□□ 0.44
CDH20-201ENST00000262717 SLC39A6Q13433 755 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 ESYT1Q9BSJ8 1104 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 FIBPO43427 364 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 UNC5CLQ8IV45 518 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 DNAAF4Q8WXU2 420 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 PALD1Q9ULE6 856 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 TTC21AQ8NDW8 1320 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 NEURL4Q96JN8 1562 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 G3BP1Q13283 466 aaKnown RBP eCLIP17.77■□□□□ 0.44
CDH20-201ENST00000262717 GPATCH3Q96I76 525 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 CCDC8Q9H0W5 538 aaPredicted RBP17.77■□□□□ 0.44
CDH20-201ENST00000262717 PTCH1Q13635 1447 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 SETD1BQ9UPS6 1966 aaKnown RBP17.77■□□□□ 0.43
CDH20-201ENST00000262717 ATP8B2P98198 1209 aa17.77■□□□□ 0.43
CDH20-201ENST00000262717 CWF19L2Q2TBE0 894 aaKnown RBP17.77■□□□□ 0.43
CDH20-201ENST00000262717 NBPF6Q5VWK0 638 aa17.77■□□□□ 0.43
CDH20-201ENST00000262717 CNTROBQ8N137 903 aa17.77■□□□□ 0.43
CDH20-201ENST00000262717 NBPF4Q96M43 638 aa17.77■□□□□ 0.43
CDH20-201ENST00000262717 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.43
CDH20-201ENST00000262717 AACSQ86V21 672 aa17.76■□□□□ 0.43
CDH20-201ENST00000262717 CPSF1Q10570 1443 aaKnown RBP17.76■□□□□ 0.43
CDH20-201ENST00000262717 TMEM131LA2VDJ0 1609 aa17.76■□□□□ 0.43
CDH20-201ENST00000262717 ANKLE2Q86XL3 938 aa17.76■□□□□ 0.43
CDH20-201ENST00000262717 RAPGEF4Q8WZA2 1011 aa17.76■□□□□ 0.43
CDH20-201ENST00000262717 PREX1Q8TCU6 1659 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 PROSER2Q86WR7 435 aaPredicted RBP17.75■□□□□ 0.43
CDH20-201ENST00000262717 RHPN1Q8TCX5 695 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 SMC3Q9UQE7 1217 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 MAP3K2Q9Y2U5 619 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 USP6P35125 1406 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 ORAI2Q96SN7 254 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 CLTCQ00610 1675 aaKnown RBP17.74■□□□□ 0.43
CDH20-201ENST00000262717 TCEANC2Q96MN5 208 aa17.74■□□□□ 0.43
CDH20-201ENST00000262717 MAP2P11137 1827 aaKnown RBP17.74■□□□□ 0.43
CDH20-201ENST00000262717 SBNO1A3KN83 1393 aa17.74■□□□□ 0.43
CDH20-201ENST00000262717 CWC22Q9HCG8 908 aaKnown RBP17.74■□□□□ 0.43
CDH20-201ENST00000262717 USP44Q9H0E7 712 aa17.74■□□□□ 0.43
CDH20-201ENST00000262717 GOLGA6L4A6NEF3 574 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 CHMLP26374 656 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 STK3Q13188 491 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 MED14O60244 1454 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 CASTP20810 708 aaKnown RBP17.73■□□□□ 0.43
CDH20-201ENST00000262717 NEXNQ0ZGT2 675 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 PRPF40BQ6NWY9 871 aaKnown RBP17.73■□□□□ 0.43
CDH20-201ENST00000262717 KIF1BPQ96EK5 621 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 FSD1Q9BTV5 496 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 BOLA2Q9H3K6 86 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 TBX22Q9Y458 520 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 JAKMIP1Q96N16 626 aaKnown RBP17.73■□□□□ 0.43
CDH20-201ENST00000262717 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
CDH20-201ENST00000262717 TTC5Q8N0Z6 440 aa17.72■□□□□ 0.43
CDH20-201ENST00000262717 MAP3K5Q99683 1374 aa17.72■□□□□ 0.43
CDH20-201ENST00000262717 ZSCAN23Q3MJ62 389 aa17.72■□□□□ 0.43
CDH20-201ENST00000262717 FERMT3Q86UX7 667 aa17.71■□□□□ 0.43
CDH20-201ENST00000262717 CCDC83Q8IWF9 413 aa17.71■□□□□ 0.43
CDH20-201ENST00000262717 DNAJC2Q99543 621 aaKnown RBP17.71■□□□□ 0.43
CDH20-201ENST00000262717 PRAMEF22A3QJZ6 481 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms