RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 PDCL3Q9H2J4 239 aa21.26■□□□□ 0.99
TRAM1-201ENST00000262213 AGLP35573 1532 aa21.26■□□□□ 0.99
TRAM1-201ENST00000262213 ZKSCAN5Q9Y2L8 839 aa21.25■□□□□ 0.99
TRAM1-201ENST00000262213 HS1BP3Q53T59 392 aa21.25■□□□□ 0.99
TRAM1-201ENST00000262213 UQCRHLA0A096LP55 91 aa21.24■□□□□ 0.99
TRAM1-201ENST00000262213 GNAI2P04899 355 aa21.24■□□□□ 0.99
TRAM1-201ENST00000262213 UQCRHP07919 91 aa21.24■□□□□ 0.99
TRAM1-201ENST00000262213 MCCP23508 829 aa21.23■□□□□ 0.99
TRAM1-201ENST00000262213 RTF1Q92541 710 aaKnown RBP21.23■□□□□ 0.99
TRAM1-201ENST00000262213 PRR36Q9H6K5 1346 aa21.23■□□□□ 0.99
TRAM1-201ENST00000262213 PNMA6EA0A0J9YXQ4 647 aa21.23■□□□□ 0.99
TRAM1-201ENST00000262213 ZNF500O60304 480 aaPredicted RBP21.23■□□□□ 0.99
TRAM1-201ENST00000262213 MX1P20591 662 aa21.23■□□□□ 0.99
TRAM1-201ENST00000262213 LRRCC1Q9C099 1032 aa21.23■□□□□ 0.99
TRAM1-201ENST00000262213 BRD1O95696 1058 aa21.22■□□□□ 0.99
TRAM1-201ENST00000262213 MBD3O95983 291 aa21.22■□□□□ 0.99
TRAM1-201ENST00000262213 KIAA0232Q92628 1395 aa21.22■□□□□ 0.99
TRAM1-201ENST00000262213 GADD45BO75293 160 aaPredicted RBP21.22■□□□□ 0.99
TRAM1-201ENST00000262213 MAP4K4O95819 1239 aaPredicted RBP21.21■□□□□ 0.99
TRAM1-201ENST00000262213 CCT4P50991 539 aaKnown RBP21.21■□□□□ 0.99
TRAM1-201ENST00000262213 UNC5CLQ8IV45 518 aa21.21■□□□□ 0.99
TRAM1-201ENST00000262213 OSBPL3Q9H4L5 887 aa21.21■□□□□ 0.99
TRAM1-201ENST00000262213 CCDC39Q9UFE4 941 aa21.21■□□□□ 0.99
TRAM1-201ENST00000262213 A2ML1A8K2U0 1454 aa21.21■□□□□ 0.99
TRAM1-201ENST00000262213 DLC1Q96QB1 1528 aa21.21■□□□□ 0.99
TRAM1-201ENST00000262213 FKBP5Q13451 457 aaPredicted RBP21.21■□□□□ 0.99
TRAM1-201ENST00000262213 TSPY26PQ9H489 355 aa21.21■□□□□ 0.99
TRAM1-201ENST00000262213 CHMLP26374 656 aa21.2■□□□□ 0.98
TRAM1-201ENST00000262213 IL1RAPL2Q9NP60 686 aa21.2■□□□□ 0.98
TRAM1-201ENST00000262213 MTHFSDQ2M296 383 aaKnown RBP21.2■□□□□ 0.98
TRAM1-201ENST00000262213 LARP6Q9BRS8 491 aaKnown RBP21.2■□□□□ 0.98
TRAM1-201ENST00000262213 STK31Q9BXU1 1019 aa21.19■□□□□ 0.98
TRAM1-201ENST00000262213 TTC21BQ7Z4L5 1316 aa21.19■□□□□ 0.98
TRAM1-201ENST00000262213 DTNBO60941 627 aa21.19■□□□□ 0.98
TRAM1-201ENST00000262213 IL25Q9H293 177 aa21.18■□□□□ 0.98
TRAM1-201ENST00000262213 MCM2P49736 904 aa21.17■□□□□ 0.98
TRAM1-201ENST00000262213 NUTM1Q86Y26 1132 aa21.17■□□□□ 0.98
TRAM1-201ENST00000262213 CRB1P82279 1406 aa21.17■□□□□ 0.98
TRAM1-201ENST00000262213 MAP3K19Q56UN5 1328 aa21.17■□□□□ 0.98
TRAM1-201ENST00000262213 CUL4AQ13619 759 aa21.17■□□□□ 0.98
TRAM1-201ENST00000262213 LRRFIP2Q9Y608 721 aaKnown RBP21.17■□□□□ 0.98
TRAM1-201ENST00000262213 ACEP12821 1306 aa21.16■□□□□ 0.98
TRAM1-201ENST00000262213 USP48Q86UV5 1035 aa21.16■□□□□ 0.98
TRAM1-201ENST00000262213 ZNF830Q96NB3 372 aaPredicted RBP21.16■□□□□ 0.98
TRAM1-201ENST00000262213 FLIIQ13045 1269 aa21.15■□□□□ 0.98
TRAM1-201ENST00000262213 DNTTIP2Q5QJE6 756 aaKnown RBP21.15■□□□□ 0.98
TRAM1-201ENST00000262213 SYAP1Q96A49 352 aaPredicted RBP21.14■□□□□ 0.98
TRAM1-201ENST00000262213 SALL3Q9BXA9 1300 aa21.14■□□□□ 0.98
TRAM1-201ENST00000262213 CSPP1Q1MSJ5 1256 aa21.14■□□□□ 0.97
TRAM1-201ENST00000262213 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.14■□□□□ 0.972e-7■■■□□ 15.9
TRAM1-201ENST00000262213 TERF1P54274 439 aa21.13■□□□□ 0.97
TRAM1-201ENST00000262213 MON2Q7Z3U7 1717 aa21.13■□□□□ 0.97
TRAM1-201ENST00000262213 ATP8B2P98198 1209 aa21.13■□□□□ 0.97
TRAM1-201ENST00000262213 RIMS1Q86UR5 1692 aaKnown RBP21.12■□□□□ 0.97
TRAM1-201ENST00000262213 SETD1AO15047 1707 aaKnown RBP21.12■□□□□ 0.97
TRAM1-201ENST00000262213 GNAI3P08754 354 aa21.12■□□□□ 0.97
TRAM1-201ENST00000262213 USP25Q9UHP3 1055 aa21.12■□□□□ 0.97
TRAM1-201ENST00000262213 C3P01024 1663 aa21.11■□□□□ 0.97
TRAM1-201ENST00000262213 TCHHQ07283 1943 aa21.11■□□□□ 0.97
TRAM1-201ENST00000262213 PLCB2Q00722 1185 aa21.11■□□□□ 0.97
TRAM1-201ENST00000262213 INTS4Q96HW7 963 aaKnown RBP21.11■□□□□ 0.97
TRAM1-201ENST00000262213 CNPY2Q9Y2B0 182 aa21.11■□□□□ 0.97
TRAM1-201ENST00000262213 ITSN1Q15811 1721 aa21.11■□□□□ 0.97
TRAM1-201ENST00000262213 JARID2Q92833 1246 aaPredicted RBP21.11■□□□□ 0.97
TRAM1-201ENST00000262213 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
TRAM1-201ENST00000262213 MCM5P33992 734 aa21.1■□□□□ 0.97
TRAM1-201ENST00000262213 ANAPC15P60006 121 aa21.1■□□□□ 0.97
TRAM1-201ENST00000262213 SRCIN1Q9C0H9 1055 aa21.1■□□□□ 0.97
TRAM1-201ENST00000262213 KIAA2012Q0VF49 1180 aa21.1■□□□□ 0.97
TRAM1-201ENST00000262213 C17orf53Q8N3J3 647 aaPredicted RBP21.1■□□□□ 0.97
TRAM1-201ENST00000262213 WDR33Q9C0J8 1336 aaKnown RBP21.1■□□□□ 0.97
TRAM1-201ENST00000262213 SASS6Q6UVJ0 657 aa21.09■□□□□ 0.97
TRAM1-201ENST00000262213 NRKQ7Z2Y5 1582 aa21.09■□□□□ 0.97
TRAM1-201ENST00000262213 SURF6O75683 361 aaKnown RBP21.08■□□□□ 0.97
TRAM1-201ENST00000262213 CPA1P15085 419 aa21.08■□□□□ 0.97
TRAM1-201ENST00000262213 AMPHP49418 695 aa21.08■□□□□ 0.97
TRAM1-201ENST00000262213 CCDC30Q5VVM6 783 aa21.08■□□□□ 0.97
TRAM1-201ENST00000262213 PEAK1Q9H792 1746 aa21.08■□□□□ 0.96
TRAM1-201ENST00000262213 PHF14O94880 888 aa21.08■□□□□ 0.96
TRAM1-201ENST00000262213 UBTFL1P0CB47 393 aaPredicted RBP21.08■□□□□ 0.96
TRAM1-201ENST00000262213 FIBPO43427 364 aa21.07■□□□□ 0.96
TRAM1-201ENST00000262213 HCLS1P14317 486 aaPredicted RBP21.07■□□□□ 0.96
TRAM1-201ENST00000262213 TSC1Q92574 1164 aa21.07■□□□□ 0.96
TRAM1-201ENST00000262213 TTC12Q9H892 705 aaPredicted RBP21.07■□□□□ 0.96
TRAM1-201ENST00000262213 AKAP12Q02952 1782 aa21.07■□□□□ 0.96
TRAM1-201ENST00000262213 ROBO2Q9HCK4 1378 aa21.07■□□□□ 0.96
TRAM1-201ENST00000262213 EYA1Q99502 592 aa21.07■□□□□ 0.96
TRAM1-201ENST00000262213 NRXN3Q9Y4C0 1643 aa21.06■□□□□ 0.96
TRAM1-201ENST00000262213 LTV1Q96GA3 475 aaPredicted RBP21.06■□□□□ 0.96
TRAM1-201ENST00000262213 STAP2Q9UGK3 403 aa21.06■□□□□ 0.96
TRAM1-201ENST00000262213 HSPA4P34932 840 aa21.05■□□□□ 0.96
TRAM1-201ENST00000262213 USP44Q9H0E7 712 aa21.05■□□□□ 0.96
TRAM1-201ENST00000262213 NUTM2GQ5VZR2 741 aa21.05■□□□□ 0.96
TRAM1-201ENST00000262213 ESF1Q9H501 851 aaKnown RBP21.05■□□□□ 0.96
TRAM1-201ENST00000262213 PHAXQ9H814 394 aaKnown RBP21.05■□□□□ 0.96
TRAM1-201ENST00000262213 SPG7Q9UQ90 795 aa21.05■□□□□ 0.96
TRAM1-201ENST00000262213 OVOS2A0A0J9YW53 1432 aa21.04■□□□□ 0.96
TRAM1-201ENST00000262213 OVOS2Q6IE36 1432 aa21.04■□□□□ 0.96
TRAM1-201ENST00000262213 DYNC1I1O14576 645 aa21.04■□□□□ 0.96
TRAM1-201ENST00000262213 ADCY5O95622 1261 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms