RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 ST18O60284 1047 aa20.09■□□□□ 0.81
TM9SF1-201ENST00000261789 USHBP1Q8N6Y0 703 aa20.09■□□□□ 0.81
TM9SF1-201ENST00000261789 IL17REQ8NFR9 667 aa20.09■□□□□ 0.81
TM9SF1-201ENST00000261789 GNAT3A8MTJ3 354 aa20.09■□□□□ 0.81
TM9SF1-201ENST00000261789 NCLP19338 710 aaKnown RBP20.09■□□□□ 0.81
TM9SF1-201ENST00000261789 CLEC17AQ6ZS10 378 aa20.09■□□□□ 0.81
TM9SF1-201ENST00000261789 OSBPL3Q9H4L5 887 aa20.08■□□□□ 0.81
TM9SF1-201ENST00000261789 ERBB4Q15303 1308 aa20.08■□□□□ 0.8
TM9SF1-201ENST00000261789 FOXD4L5Q5VV16 416 aaPredicted RBP20.08■□□□□ 0.8
TM9SF1-201ENST00000261789 FOXD4L4Q8WXT5 416 aaPredicted RBP20.08■□□□□ 0.8
TM9SF1-201ENST00000261789 CYP2E1P05181 493 aaPredicted RBP20.07■□□□□ 0.8
TM9SF1-201ENST00000261789 HOXC9P31274 260 aa20.07■□□□□ 0.8
TM9SF1-201ENST00000261789 CCDC30Q5VVM6 783 aa20.07■□□□□ 0.8
TM9SF1-201ENST00000261789 LRRCC1Q9C099 1032 aa20.07■□□□□ 0.8
TM9SF1-201ENST00000261789 ISY1Q9ULR0 285 aaKnown RBP20.07■□□□□ 0.8
TM9SF1-201ENST00000261789 LRRFIP2Q9Y608 721 aaKnown RBP20.07■□□□□ 0.8
TM9SF1-201ENST00000261789 RILPL2Q969X0 211 aa20.07■□□□□ 0.8
TM9SF1-201ENST00000261789 PTMSP20962 102 aa20.06■□□□□ 0.8
TM9SF1-201ENST00000261789 NUCB2P80303 420 aa20.06■□□□□ 0.8
TM9SF1-201ENST00000261789 KLHL40Q2TBA0 621 aa20.06■□□□□ 0.8
TM9SF1-201ENST00000261789 ZDHHC9Q9Y397 364 aa20.06■□□□□ 0.8
TM9SF1-201ENST00000261789 SLIT1O75093 1534 aa20.06■□□□□ 0.8
TM9SF1-201ENST00000261789 ARHGAP23Q9P227 1491 aa20.06■□□□□ 0.8
TM9SF1-201ENST00000261789 TRIM6-TRIM34B2RNG4 842 aa20.05■□□□□ 0.8
TM9SF1-201ENST00000261789 NEK4P51957 841 aa20.05■□□□□ 0.8
TM9SF1-201ENST00000261789 C14orf37Q86TY3 774 aa20.05■□□□□ 0.8
TM9SF1-201ENST00000261789 PIK3C2AO00443 1686 aa20.05■□□□□ 0.8
TM9SF1-201ENST00000261789 MX1P20591 662 aa20.05■□□□□ 0.8
TM9SF1-201ENST00000261789 NOL8Q76FK4 1167 aaKnown RBP20.05■□□□□ 0.8
TM9SF1-201ENST00000261789 SALL3Q9BXA9 1300 aa20.05■□□□□ 0.8
TM9SF1-201ENST00000261789 CAVIN1Q6NZI2 390 aaKnown RBP20.04■□□□□ 0.8
TM9SF1-201ENST00000261789 UNC5CLQ8IV45 518 aa20.04■□□□□ 0.8
TM9SF1-201ENST00000261789 ABTB2Q8N961 1025 aa20.04■□□□□ 0.8
TM9SF1-201ENST00000261789 PHAXQ9H814 394 aaKnown RBP20.04■□□□□ 0.8
TM9SF1-201ENST00000261789 LMBRD1Q9NUN5 540 aa20.04■□□□□ 0.8
TM9SF1-201ENST00000261789 PALD1Q9ULE6 856 aa20.04■□□□□ 0.8
TM9SF1-201ENST00000261789 DIP2AQ14689 1571 aa20.04■□□□□ 0.8
TM9SF1-201ENST00000261789 ATP8B2P98198 1209 aa20.04■□□□□ 0.8
TM9SF1-201ENST00000261789 IL1RAPL2Q9NP60 686 aa20.04■□□□□ 0.8
TM9SF1-201ENST00000261789 TBX22Q9Y458 520 aa20.04■□□□□ 0.8
TM9SF1-201ENST00000261789 CLCN1P35523 988 aa20.03■□□□□ 0.8
TM9SF1-201ENST00000261789 ESYT1Q9BSJ8 1104 aa20.03■□□□□ 0.8
TM9SF1-201ENST00000261789 GNAI3P08754 354 aa20.03■□□□□ 0.8
TM9SF1-201ENST00000261789 USP44Q9H0E7 712 aa20.03■□□□□ 0.8
TM9SF1-201ENST00000261789 PRPF40AO75400 957 aaKnown RBP20.02■□□□□ 0.8
TM9SF1-201ENST00000261789 KCNA6P17658 529 aa20.02■□□□□ 0.8
TM9SF1-201ENST00000261789 RBM33Q96EV2 1170 aaKnown RBP20.02■□□□□ 0.8
TM9SF1-201ENST00000261789 ESPNB1AK53 854 aa20.01■□□□□ 0.79
TM9SF1-201ENST00000261789 TRIM44Q96DX7 344 aaPredicted RBP20.01■□□□□ 0.79
TM9SF1-201ENST00000261789 CWC22Q9HCG8 908 aaKnown RBP20.01■□□□□ 0.79
TM9SF1-201ENST00000261789 ANO2Q9NQ90 1003 aa20.01■□□□□ 0.79
TM9SF1-201ENST00000261789 TAF7Q15545 349 aaPredicted RBP20.01■□□□□ 0.79
TM9SF1-201ENST00000261789 TMX3Q96JJ7 454 aa20.01■□□□□ 0.79
TM9SF1-201ENST00000261789 IBTKQ9P2D0 1353 aaPredicted RBP20.01■□□□□ 0.79
TM9SF1-201ENST00000261789 HTATSF1O43719 755 aaKnown RBP20■□□□□ 0.79
TM9SF1-201ENST00000261789 MAP4K4O95819 1239 aaPredicted RBP20■□□□□ 0.79
TM9SF1-201ENST00000261789 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
TM9SF1-201ENST00000261789 CHMLP26374 656 aa20■□□□□ 0.79
TM9SF1-201ENST00000261789 NASPP49321 788 aaPredicted RBP20■□□□□ 0.79
TM9SF1-201ENST00000261789 IL25Q9H293 177 aa20■□□□□ 0.79
TM9SF1-201ENST00000261789 RBM27Q9P2N5 1060 aaKnown RBP20■□□□□ 0.79
TM9SF1-201ENST00000261789 MAP3K5Q99683 1374 aa20■□□□□ 0.79
TM9SF1-201ENST00000261789 ADAMTSL3P82987 1691 aa20■□□□□ 0.79
TM9SF1-201ENST00000261789 NUTM1Q86Y26 1132 aa20■□□□□ 0.79
TM9SF1-201ENST00000261789 HDGFL1Q5TGJ6 251 aa19.99■□□□□ 0.79
TM9SF1-201ENST00000261789 SETD1BQ9UPS6 1966 aaKnown RBP19.99■□□□□ 0.79
TM9SF1-201ENST00000261789 ZBTB7CA1YPR0 619 aa19.99■□□□□ 0.79
TM9SF1-201ENST00000261789 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
TM9SF1-201ENST00000261789 UBTFL1P0CB47 393 aaPredicted RBP19.99■□□□□ 0.79
TM9SF1-201ENST00000261789 ZSCAN23Q3MJ62 389 aa19.99■□□□□ 0.79
TM9SF1-201ENST00000261789 NAP1L5Q96NT1 182 aaPredicted RBP19.99■□□□□ 0.79
TM9SF1-201ENST00000261789 XRN1Q8IZH2 1706 aaKnown RBP19.99■□□□□ 0.79
TM9SF1-201ENST00000261789 FAM208AQ9UK61 1670 aaKnown RBP19.98■□□□□ 0.79
TM9SF1-201ENST00000261789 GPT2Q8TD30 523 aa19.98■□□□□ 0.79
TM9SF1-201ENST00000261789 NWD1Q149M9 1564 aa19.98■□□□□ 0.79
TM9SF1-201ENST00000261789 UPF3BQ9BZI7 483 aaKnown RBP19.98■□□□□ 0.79
TM9SF1-201ENST00000261789 LGR6Q9HBX8 967 aa19.97■□□□□ 0.79
TM9SF1-201ENST00000261789 NSFL1CQ9UNZ2 370 aaKnown RBP19.97■□□□□ 0.79
TM9SF1-201ENST00000261789 ANXA1P04083 346 aa19.96■□□□□ 0.79
TM9SF1-201ENST00000261789 LRRC37A3O60309 1634 aa19.96■□□□□ 0.79
TM9SF1-201ENST00000261789 KCNQ3O43525 872 aa19.95■□□□□ 0.78
TM9SF1-201ENST00000261789 SURF6O75683 361 aaKnown RBP19.95■□□□□ 0.78
TM9SF1-201ENST00000261789 FOXD4L6Q3SYB3 417 aaPredicted RBP19.95■□□□□ 0.78
TM9SF1-201ENST00000261789 FOXD4L3Q6VB84 417 aaPredicted RBP19.95■□□□□ 0.78
TM9SF1-201ENST00000261789 PPP1R42Q7Z4L9 355 aa19.95■□□□□ 0.78
TM9SF1-201ENST00000261789 NBPF7P0C2Y1 421 aaPredicted RBP19.95■□□□□ 0.78
TM9SF1-201ENST00000261789 THEMISQ8N1K5 641 aaPredicted RBP19.95■□□□□ 0.78
TM9SF1-201ENST00000261789 TUBGCP6Q96RT7 1819 aa19.94■□□□□ 0.78
TM9SF1-201ENST00000261789 STAP2Q9UGK3 403 aa19.94■□□□□ 0.78
TM9SF1-201ENST00000261789 PRIM1P49642 420 aaKnown RBP19.94■□□□□ 0.78
TM9SF1-201ENST00000261789 NBPF6Q5VWK0 638 aa19.94■□□□□ 0.78
TM9SF1-201ENST00000261789 NBPF4Q96M43 638 aa19.94■□□□□ 0.78
TM9SF1-201ENST00000261789 ZNF445P59923 1031 aa19.93■□□□□ 0.78
TM9SF1-201ENST00000261789 RBSNQ9H1K0 784 aa19.93■□□□□ 0.78
TM9SF1-201ENST00000261789 MARF1Q9Y4F3 1742 aaKnown RBP19.93■□□□□ 0.78
TM9SF1-201ENST00000261789 SOS1Q07889 1333 aaPredicted RBP19.93■□□□□ 0.78
TM9SF1-201ENST00000261789 SSH3Q8TE77 659 aa19.93■□□□□ 0.78
TM9SF1-201ENST00000261789 CHPF2Q9P2E5 772 aa19.93■□□□□ 0.78
TM9SF1-201ENST00000261789 SRGAP3O43295 1099 aa19.92■□□□□ 0.78
TM9SF1-201ENST00000261789 MCCP23508 829 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms