RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 KRT85P78386 507 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 CDC5LQ99459 802 aaKnown RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 COL17A1Q9UMD9 1497 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 ARHGEF10O15013 1369 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 NEMFO60524 1076 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 LDHCP07864 332 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 PPP1R12BO60237 982 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 SURF6O75683 361 aaKnown RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 ZRSR2Q15696 482 aaKnown RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 EXOC6Q8TAG9 804 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 IFIT1P09914 478 aaKnown RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 RRP7AQ9Y3A4 280 aaKnown RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 KDM5CP41229 1560 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 TTC37Q6PGP7 1564 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 CHD1LQ86WJ1 897 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 PDCL2Q8N4E4 241 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 SCAND2PQ9GZW5 306 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 IQGAP3Q86VI3 1631 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 ALDH1L1O75891 902 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 ANAPC15P60006 121 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 IMMTQ16891 758 aaKnown RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 TMTC2Q8N394 836 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 DDX12PQ92771 950 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 GGNBP2Q9H3C7 697 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 CWC15Q9P013 229 aaKnown RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 PHF8Q9UPP1 1060 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 POLR1AO95602 1720 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 NPATQ14207 1427 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 CDC42BPAQ5VT25 1732 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 TOM1L2Q6ZVM7 507 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 KANK3Q6NY19 840 aa5.09□□□□□ -1.6
VPS13C-202ENST00000261517 FMNL2Q96PY5 1086 aa5.09□□□□□ -1.6
VPS13C-202ENST00000261517 CNNM1Q9NRU3 951 aa5.09□□□□□ -1.6
VPS13C-202ENST00000261517 STK24Q9Y6E0 443 aa5.09□□□□□ -1.6
VPS13C-202ENST00000261517 PARD3Q8TEW0 1356 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 HOXA7P31268 230 aaPredicted RBP5.08□□□□□ -1.6
VPS13C-202ENST00000261517 NLRP1Q9C000 1473 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 FLT4P35916 1363 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 CAVIN4Q5BKX8 364 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 NUTM2DQ5VT03 806 aaPredicted RBP5.08□□□□□ -1.6
VPS13C-202ENST00000261517 SULT6B1Q6IMI4 303 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 DDX11Q96FC9 970 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 AOX1Q06278 1338 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 SETD1BQ9UPS6 1966 aaKnown RBP5.08□□□□□ -1.6
VPS13C-202ENST00000261517 ATL3Q6DD88 541 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 MLH3Q9UHC1 1453 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 MCM5P33992 734 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 B4DLN1 442 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 MRPL12P52815 198 aaKnown RBP5.08□□□□□ -1.6
VPS13C-202ENST00000261517 HSP90B2PQ58FF3 399 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 RUFY1Q96T51 708 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 TMOD3Q9NYL9 352 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 CCDC69A6NI79 296 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 POTEJP0CG39 1038 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 SLC5A1P13866 664 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 KIF5BP33176 963 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 SOGA3Q5TF21 947 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 TSHZ2Q9NRE2 1034 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 K7ELQ4 463 aaPredicted RBP5.08□□□□□ -1.6
VPS13C-202ENST00000261517 SLC4A2P04920 1241 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 ODF2Q5BJF6 829 aa5.08□□□□□ -1.6
VPS13C-202ENST00000261517 SPHKAPQ2M3C7 1700 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 MAP3K12Q12852 859 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 STXBP4Q6ZWJ1 553 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 GOLGA6L9A6NEM1 432 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 UQCRFS1P1P0C7P4 283 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 PLCG2P16885 1265 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 BLOC1S2Q6QNY1 142 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 TSPY26PQ9H489 355 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 HDAC1Q13547 482 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-202ENST00000261517 PPP1R42Q7Z4L9 355 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 PNMA2Q9UL42 364 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 TBX22Q9Y458 520 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 HOOK3Q86VS8 718 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 SDF4Q9BRK5 362 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 UBAC1Q9BSL1 405 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 ZCCHC11Q5TAX3 1644 aaKnown RBP5.07□□□□□ -1.6
VPS13C-202ENST00000261517 GNAT2P19087 354 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 CETN2P41208 172 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 SYCP1Q15431 976 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 BMP2KLQ5H9B9 411 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 NYXQ9GZU5 481 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 KIAA1210Q9ULL0 1709 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 GNAQP50148 359 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 IFNL2Q8IZJ0 200 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 EVI5LQ96CN4 794 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 NEUROD6Q96NK8 337 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 NAP1L4Q99733 375 aaKnown RBP5.07□□□□□ -1.6
VPS13C-202ENST00000261517 SENP3Q9H4L4 574 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-202ENST00000261517 NOB1Q9ULX3 412 aaKnown RBP5.07□□□□□ -1.6
VPS13C-202ENST00000261517 OFD1O75665 1012 aa5.07□□□□□ -1.6
VPS13C-202ENST00000261517 HMOX1P09601 288 aa5.06□□□□□ -1.6
VPS13C-202ENST00000261517 EXOSC9Q06265 439 aaKnown RBP5.06□□□□□ -1.6
VPS13C-202ENST00000261517 GLT8D2Q9H1C3 349 aa5.06□□□□□ -1.6
VPS13C-202ENST00000261517 CNNM2Q9H8M5 875 aa5.06□□□□□ -1.6
VPS13C-202ENST00000261517 ZPR1O75312 459 aa5.06□□□□□ -1.6
VPS13C-202ENST00000261517 CCDC83Q8IWF9 413 aa5.06□□□□□ -1.6
VPS13C-202ENST00000261517 RBM26Q5T8P6 1007 aaKnown RBP5.06□□□□□ -1.6
VPS13C-202ENST00000261517 SYTL4Q96C24 671 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-202ENST00000261517 CCDC171Q6TFL3 1326 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms