RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 C1orf216Q8TAB5 229 aa8.26□□□□□ -1.09
CCDC54-201ENST00000261058 ARHGEF10LQ9HCE6 1279 aa8.26□□□□□ -1.09
CCDC54-201ENST00000261058 RBM19Q9Y4C8 960 aaKnown RBP8.26□□□□□ -1.09
CCDC54-201ENST00000261058 BACH1O14867 736 aa8.25□□□□□ -1.09
CCDC54-201ENST00000261058 WEE1P30291 646 aa8.25□□□□□ -1.09
CCDC54-201ENST00000261058 ZNF787Q6DD87 383 aa8.25□□□□□ -1.09
CCDC54-201ENST00000261058 ESYT1Q9BSJ8 1104 aa8.25□□□□□ -1.09
CCDC54-201ENST00000261058 A0A1W2PRU2 124 aa8.24□□□□□ -1.09
CCDC54-201ENST00000261058 SMCPP49901 116 aaPredicted RBP8.24□□□□□ -1.09
CCDC54-201ENST00000261058 FOXK2Q01167 660 aa8.24□□□□□ -1.09
CCDC54-201ENST00000261058 KCNA1Q09470 495 aa8.24□□□□□ -1.09
CCDC54-201ENST00000261058 B4GALNT3Q6L9W6 998 aa8.24□□□□□ -1.09
CCDC54-201ENST00000261058 RAB6BQ9NRW1 208 aa8.24□□□□□ -1.09
CCDC54-201ENST00000261058 DGAT1O75907 488 aa8.23□□□□□ -1.09
CCDC54-201ENST00000261058 PKDCCQ504Y2 493 aa8.23□□□□□ -1.09
CCDC54-201ENST00000261058 CNKSR1Q969H4 720 aa8.23□□□□□ -1.09
CCDC54-201ENST00000261058 AGBL1Q96MI9 1066 aa8.23□□□□□ -1.09
CCDC54-201ENST00000261058 FHDC1Q9C0D6 1143 aaPredicted RBP8.23□□□□□ -1.09
CCDC54-201ENST00000261058 CAPN5O15484 640 aaPredicted RBP8.22□□□□□ -1.09
CCDC54-201ENST00000261058 ATP2B4P23634 1241 aa8.22□□□□□ -1.09
CCDC54-201ENST00000261058 SMTNP53814 917 aa8.22□□□□□ -1.09
CCDC54-201ENST00000261058 TRIM26Q12899 539 aaPredicted RBP8.22□□□□□ -1.09
CCDC54-201ENST00000261058 ZNF295-AS1Q8N0V1 137 aa8.22□□□□□ -1.09
CCDC54-201ENST00000261058 CRIPAKQ8N1N5 446 aa8.22□□□□□ -1.09
CCDC54-201ENST00000261058 TSEN34Q9BSV6 310 aaKnown RBP8.22□□□□□ -1.09
CCDC54-201ENST00000261058 CXXC1Q9P0U4 656 aaPredicted RBP8.22□□□□□ -1.09
CCDC54-201ENST00000261058 SCHIP1Q9P0W5 487 aaPredicted RBP8.22□□□□□ -1.09
CCDC54-201ENST00000261058 IQSEC3Q9UPP2 1182 aaPredicted RBP8.22□□□□□ -1.09
CCDC54-201ENST00000261058 FAM187AA6NFU0 413 aa8.21□□□□□ -1.09
CCDC54-201ENST00000261058 SPINT1O43278 529 aa8.21□□□□□ -1.09
CCDC54-201ENST00000261058 C21orf2O43822 256 aa8.21□□□□□ -1.09
CCDC54-201ENST00000261058 CTC1Q2NKJ3 1217 aa8.21□□□□□ -1.09
CCDC54-201ENST00000261058 POTEAQ6S8J7 498 aa8.21□□□□□ -1.09
CCDC54-201ENST00000261058 TAS1R3Q7RTX0 852 aa8.21□□□□□ -1.09
CCDC54-201ENST00000261058 TNS4Q8IZW8 715 aa8.21□□□□□ -1.09
CCDC54-201ENST00000261058 GNEQ9Y223 722 aaKnown RBP8.21□□□□□ -1.09
CCDC54-201ENST00000261058 A6NJY4 79 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 PATL2C9JE40 543 aaKnown RBP8.2□□□□□ -1.1
CCDC54-201ENST00000261058 IGFBP4P22692 258 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 GPC1P35052 558 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 RELBQ01201 579 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 TXNDC2Q86VQ3 553 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 LINC00528Q8N1L1 170 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 GAS2L2Q8NHY3 880 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 SERTAD1Q9UHV2 236 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 CDK2AP1O14519 115 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 PRMT3O60678 531 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 STAG2Q8N3U4 1231 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 HINFPQ9BQA5 517 aa8.2□□□□□ -1.1
CCDC54-201ENST00000261058 CENPCQ03188 943 aa8.19□□□□□ -1.1
CCDC54-201ENST00000261058 PRIMPOLQ96LW4 560 aa8.19□□□□□ -1.1
CCDC54-201ENST00000261058 TSPAN10Q9H1Z9 355 aaPredicted RBP8.19□□□□□ -1.1
CCDC54-201ENST00000261058 ZNF395Q9H8N7 513 aaPredicted RBP8.19□□□□□ -1.1
CCDC54-201ENST00000261058 USP3Q9Y6I4 520 aa8.19□□□□□ -1.1
CCDC54-201ENST00000261058 FOXO3O43524 673 aa8.18□□□□□ -1.1
CCDC54-201ENST00000261058 RNF144AP50876 292 aaPredicted RBP8.18□□□□□ -1.1
CCDC54-201ENST00000261058 TLR1Q15399 786 aa8.18□□□□□ -1.1
CCDC54-201ENST00000261058 MRPL14Q6P1L8 145 aaKnown RBP8.18□□□□□ -1.1
CCDC54-201ENST00000261058 AEBP1Q8IUX7 1158 aa8.18□□□□□ -1.1
CCDC54-201ENST00000261058 COL26A1Q96A83 441 aa8.18□□□□□ -1.1
CCDC54-201ENST00000261058 GRIP2Q9C0E4 1043 aa8.18□□□□□ -1.1
CCDC54-201ENST00000261058 ATAD2Q6PL18 1390 aa8.17□□□□□ -1.1
CCDC54-201ENST00000261058 LGR5O75473 907 aa8.17□□□□□ -1.1
CCDC54-201ENST00000261058 FKBP5Q13451 457 aaPredicted RBP8.17□□□□□ -1.1
CCDC54-201ENST00000261058 PPARGC1BQ86YN6 1023 aaKnown RBP8.17□□□□□ -1.1
CCDC54-201ENST00000261058 SLC9A9Q8IVB4 645 aa8.17□□□□□ -1.1
CCDC54-201ENST00000261058 ZBTB7CA1YPR0 619 aa8.16□□□□□ -1.1
CCDC54-201ENST00000261058 MEN1O00255 615 aa8.16□□□□□ -1.1
CCDC54-201ENST00000261058 FOXD4L5Q5VV16 416 aaPredicted RBP8.16□□□□□ -1.1
CCDC54-201ENST00000261058 TRIM46Q7Z4K8 759 aa8.16□□□□□ -1.1
CCDC54-201ENST00000261058 SCG3Q8WXD2 468 aaKnown RBP8.16□□□□□ -1.1
CCDC54-201ENST00000261058 NLRP3Q96P20 1036 aa8.16□□□□□ -1.1
CCDC54-201ENST00000261058 PURBQ96QR8 312 aaKnown RBP8.16□□□□□ -1.1
CCDC54-201ENST00000261058 INSM2Q96T92 566 aaPredicted RBP8.16□□□□□ -1.1
CCDC54-201ENST00000261058 ARID4AP29374 1257 aaPredicted RBP8.15□□□□□ -1.1
CCDC54-201ENST00000261058 HIRAP54198 1017 aaPredicted RBP8.15□□□□□ -1.1
CCDC54-201ENST00000261058 NBPF15Q8N660 670 aa8.15□□□□□ -1.1
CCDC54-201ENST00000261058 C2orf49Q9BVC5 232 aaPredicted RBP8.15□□□□□ -1.1
CCDC54-201ENST00000261058 UPP2O95045 317 aa8.14□□□□□ -1.11
CCDC54-201ENST00000261058 CTSOP43234 321 aaPredicted RBP8.14□□□□□ -1.11
CCDC54-201ENST00000261058 PSMA6P60900 246 aaKnown RBP8.14□□□□□ -1.11
CCDC54-201ENST00000261058 SPATA31C2B4DYI2 1134 aa8.13□□□□□ -1.11
CCDC54-201ENST00000261058 SCNN1AP37088 669 aa8.13□□□□□ -1.11
CCDC54-201ENST00000261058 TEAD4Q15561 434 aa8.13□□□□□ -1.11
CCDC54-201ENST00000261058 ZDHHC1Q8WTX9 485 aa8.13□□□□□ -1.11
CCDC54-201ENST00000261058 ZNF775Q96BV0 537 aaPredicted RBP8.13□□□□□ -1.11
CCDC54-201ENST00000261058 ZSCAN10Q96SZ4 725 aaPredicted RBP8.13□□□□□ -1.11
CCDC54-201ENST00000261058 IVNS1ABPQ9Y6Y0 642 aa8.13□□□□□ -1.11
CCDC54-201ENST00000261058 EML1O00423 815 aa8.12□□□□□ -1.11
CCDC54-201ENST00000261058 AXIN1O15169 862 aa8.12□□□□□ -1.11
CCDC54-201ENST00000261058 PTCD1O75127 700 aaKnown RBP8.12□□□□□ -1.11
CCDC54-201ENST00000261058 BMP2P12643 396 aa8.12□□□□□ -1.11
CCDC54-201ENST00000261058 BMP1P13497 986 aa8.12□□□□□ -1.11
CCDC54-201ENST00000261058 TBCELQ5QJ74 424 aa8.12□□□□□ -1.11
CCDC54-201ENST00000261058 RNF217Q8TC41 542 aa8.12□□□□□ -1.11
CCDC54-201ENST00000261058 RHBDD1Q8TEB9 315 aa8.12□□□□□ -1.11
CCDC54-201ENST00000261058 AAASQ9NRG9 546 aa8.12□□□□□ -1.11
CCDC54-201ENST00000261058 SOS2Q07890 1332 aaPredicted RBP8.12□□□□□ -1.11
CCDC54-201ENST00000261058 PPP1R12BO60237 982 aaPredicted RBP8.12□□□□□ -1.11
CCDC54-201ENST00000261058 CAPN12Q6ZSI9 719 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms