RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 WDR43Q15061 677 aaKnown RBP eCLIP24.8■■□□□ 1.56
UPK3B-201ENST00000257632 SLC52A2Q9HAB3 445 aa24.8■■□□□ 1.56
UPK3B-201ENST00000257632 LOC102724428A0A0B4J2F2 783 aa24.79■■□□□ 1.56
UPK3B-201ENST00000257632 SIK1P57059 783 aa24.79■■□□□ 1.56
UPK3B-201ENST00000257632 MAPK8IP3Q9UPT6 1336 aa24.79■■□□□ 1.56
UPK3B-201ENST00000257632 C5P01031 1676 aa24.78■■□□□ 1.56
UPK3B-201ENST00000257632 ADAMTS7Q9UKP4 1686 aa24.78■■□□□ 1.56
UPK3B-201ENST00000257632 ZNF827Q17R98 1081 aa24.78■■□□□ 1.56
UPK3B-201ENST00000257632 RTF1Q92541 710 aaKnown RBP24.78■■□□□ 1.56
UPK3B-201ENST00000257632 RBM42Q9BTD8 480 aaKnown RBP24.78■■□□□ 1.56
UPK3B-201ENST00000257632 MRC1P22897 1456 aa24.77■■□□□ 1.56
UPK3B-201ENST00000257632 TEFQ10587 303 aa24.77■■□□□ 1.56
UPK3B-201ENST00000257632 TAF1LQ8IZX4 1826 aa24.77■■□□□ 1.56
UPK3B-201ENST00000257632 ATP6V1AP38606 617 aa24.76■■□□□ 1.55
UPK3B-201ENST00000257632 AKT1S1Q96B36 256 aa24.76■■□□□ 1.55
UPK3B-201ENST00000257632 IL17REQ8NFR9 667 aa24.75■■□□□ 1.55
UPK3B-201ENST00000257632 PLEKHF1Q96S99 279 aa24.75■■□□□ 1.55
UPK3B-201ENST00000257632 TFCP2L1Q9NZI6 479 aa24.75■■□□□ 1.55
UPK3B-201ENST00000257632 PPP1R1BQ9UD71 204 aaPredicted RBP24.75■■□□□ 1.55
UPK3B-201ENST00000257632 SPON1Q9HCB6 807 aa24.74■■□□□ 1.55
UPK3B-201ENST00000257632 PTCD1O75127 700 aaKnown RBP24.73■■□□□ 1.55
UPK3B-201ENST00000257632 CASZ1Q86V15 1759 aa24.72■■□□□ 1.55
UPK3B-201ENST00000257632 NFE2L2Q16236 605 aa24.71■■□□□ 1.55
UPK3B-201ENST00000257632 AK7Q96M32 723 aa24.71■■□□□ 1.55
UPK3B-201ENST00000257632 C4BP0C0L5 1744 aa24.71■■□□□ 1.55
UPK3B-201ENST00000257632 DLG5Q8TDM6 1919 aa24.71■■□□□ 1.55
UPK3B-201ENST00000257632 TUBGCP6Q96RT7 1819 aa24.7■■□□□ 1.55
UPK3B-201ENST00000257632 QSER1Q2KHR3 1735 aa24.7■■□□□ 1.54
UPK3B-201ENST00000257632 HTATSF1O43719 755 aaKnown RBP24.7■■□□□ 1.54
UPK3B-201ENST00000257632 SLC39A6Q13433 755 aa24.7■■□□□ 1.54
UPK3B-201ENST00000257632 MCM10Q7L590 875 aa24.7■■□□□ 1.54
UPK3B-201ENST00000257632 CEMIPQ8WUJ3 1361 aa24.69■■□□□ 1.54
UPK3B-201ENST00000257632 ITPK1Q13572 414 aa24.69■■□□□ 1.54
UPK3B-201ENST00000257632 TTC5Q8N0Z6 440 aa24.69■■□□□ 1.54
UPK3B-201ENST00000257632 LINC00116Q8NCU8 138 aa24.69■■□□□ 1.54
UPK3B-201ENST00000257632 PDGFDQ9GZP0 370 aaPredicted RBP24.69■■□□□ 1.54
UPK3B-201ENST00000257632 ZNF831Q5JPB2 1677 aa24.69■■□□□ 1.54
UPK3B-201ENST00000257632 SIPA1L3O60292 1781 aaPredicted RBP24.68■■□□□ 1.54
UPK3B-201ENST00000257632 DCTN1Q14203 1278 aa24.68■■□□□ 1.54
UPK3B-201ENST00000257632 CCDC146Q8IYE0 955 aa24.68■■□□□ 1.54
UPK3B-201ENST00000257632 ADAMTS8Q9UP79 889 aa24.68■■□□□ 1.54
UPK3B-201ENST00000257632 PNPLA7Q6ZV29 1317 aa24.67■■□□□ 1.54
UPK3B-201ENST00000257632 ZBTB7AO95365 584 aa24.67■■□□□ 1.54
UPK3B-201ENST00000257632 SLC4A9Q96Q91 983 aa24.67■■□□□ 1.54
UPK3B-201ENST00000257632 MSH5O43196 834 aa24.66■■□□□ 1.54
UPK3B-201ENST00000257632 RUNDC1Q96C34 613 aa24.65■■□□□ 1.54
UPK3B-201ENST00000257632 BTBD11A6QL63 1104 aa24.64■■□□□ 1.54
UPK3B-201ENST00000257632 CCDC184Q52MB2 194 aa24.64■■□□□ 1.54
UPK3B-201ENST00000257632 MRS2Q9HD23 443 aa24.64■■□□□ 1.54
UPK3B-201ENST00000257632 GNPATO15228 680 aa24.63■■□□□ 1.53
UPK3B-201ENST00000257632 RIPK4P57078 832 aa24.63■■□□□ 1.53
UPK3B-201ENST00000257632 FLAD1Q8NFF5 587 aa24.63■■□□□ 1.53
UPK3B-201ENST00000257632 MTFR1LQ9H019 292 aa24.63■■□□□ 1.53
UPK3B-201ENST00000257632 COL5A3P25940 1745 aaPredicted RBP24.63■■□□□ 1.53
UPK3B-201ENST00000257632 KCPQ6ZWJ8 1503 aa24.62■■□□□ 1.53
UPK3B-201ENST00000257632 PHF14O94880 888 aa24.62■■□□□ 1.53
UPK3B-201ENST00000257632 TMPOP42166 694 aaKnown RBP24.62■■□□□ 1.53
UPK3B-201ENST00000257632 ZNF790Q6PG37 636 aa24.62■■□□□ 1.53
UPK3B-201ENST00000257632 ATF5Q9Y2D1 282 aaPredicted RBP24.62■■□□□ 1.53
UPK3B-201ENST00000257632 UBR2Q8IWV8 1755 aa24.62■■□□□ 1.53
UPK3B-201ENST00000257632 UBR3Q6ZT12 1888 aa24.62■■□□□ 1.53
UPK3B-201ENST00000257632 TJP1Q07157 1748 aa24.61■■□□□ 1.53
UPK3B-201ENST00000257632 SLC16A10Q8TF71 515 aa24.61■■□□□ 1.53
UPK3B-201ENST00000257632 LMOD3Q0VAK6 560 aa24.6■■□□□ 1.53
UPK3B-201ENST00000257632 NEUROD2Q15784 382 aa24.6■■□□□ 1.53
UPK3B-201ENST00000257632 COL23A1Q86Y22 540 aaPredicted RBP24.6■■□□□ 1.53
UPK3B-201ENST00000257632 RRP7AQ9Y3A4 280 aaKnown RBP24.6■■□□□ 1.53
UPK3B-201ENST00000257632 CNTNAP4Q9C0A0 1308 aa24.6■■□□□ 1.53
UPK3B-201ENST00000257632 TAF7Q15545 349 aaPredicted RBP24.59■■□□□ 1.53
UPK3B-201ENST00000257632 DNAJC10Q8IXB1 793 aa24.59■■□□□ 1.53
UPK3B-201ENST00000257632 CICQ96RK0 1608 aaPredicted RBP24.59■■□□□ 1.53
UPK3B-201ENST00000257632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.58■■□□□ 1.53
UPK3B-201ENST00000257632 YY1P25490 414 aa24.58■■□□□ 1.53
UPK3B-201ENST00000257632 SSFA2P28290 1259 aa24.58■■□□□ 1.53
UPK3B-201ENST00000257632 RC3H1Q5TC82 1133 aaKnown RBP24.58■■□□□ 1.53
UPK3B-201ENST00000257632 VSIG10Q8N0Z9 540 aa24.58■■□□□ 1.53
UPK3B-201ENST00000257632 FMNL2Q96PY5 1086 aa24.58■■□□□ 1.53
UPK3B-201ENST00000257632 THUMPD2Q9BTF0 503 aaKnown RBP24.58■■□□□ 1.53
UPK3B-201ENST00000257632 RTCBQ9Y3I0 505 aaKnown RBP24.58■■□□□ 1.53
UPK3B-201ENST00000257632 DCAF8L1A6NGE4 600 aa24.57■■□□□ 1.52
UPK3B-201ENST00000257632 CRKLP46109 303 aaKnown RBP24.57■■□□□ 1.52
UPK3B-201ENST00000257632 ZNF496Q96IT1 587 aaPredicted RBP24.57■■□□□ 1.52
UPK3B-201ENST00000257632 SMIM5Q71RC9 77 aa24.56■■□□□ 1.52
UPK3B-201ENST00000257632 HEG1Q9ULI3 1381 aa24.55■■□□□ 1.52
UPK3B-201ENST00000257632 MYH14Q7Z406 1995 aaKnown RBP24.55■■□□□ 1.52
UPK3B-201ENST00000257632 KCNQ3O43525 872 aa24.55■■□□□ 1.52
UPK3B-201ENST00000257632 AMIGO3Q86WK7 504 aa24.55■■□□□ 1.52
UPK3B-201ENST00000257632 PNISRQ8TF01 805 aaKnown RBP24.55■■□□□ 1.52
UPK3B-201ENST00000257632 RPS6KA4O75676 772 aa24.54■■□□□ 1.52
UPK3B-201ENST00000257632 TRAPPC3LQ5T215 181 aa24.53■■□□□ 1.52
UPK3B-201ENST00000257632 CCDC87Q9NVE4 849 aa24.53■■□□□ 1.52
UPK3B-201ENST00000257632 MIS18AQ9NYP9 233 aa24.53■■□□□ 1.52
UPK3B-201ENST00000257632 STARD3NLO95772 234 aa24.52■■□□□ 1.52
UPK3B-201ENST00000257632 CYP19A1P11511 503 aaPredicted RBP24.52■■□□□ 1.52
UPK3B-201ENST00000257632 POLD1P28340 1107 aa24.52■■□□□ 1.52
UPK3B-201ENST00000257632 PTGER2P43116 358 aa24.52■■□□□ 1.52
UPK3B-201ENST00000257632 TEX13AQ9BXU3 409 aaPredicted RBP24.52■■□□□ 1.52
UPK3B-201ENST00000257632 APAF1O14727 1248 aa24.51■■□□□ 1.51
UPK3B-201ENST00000257632 ADRA2BP18089 450 aa24.51■■□□□ 1.51
UPK3B-201ENST00000257632 MSL1Q68DK7 614 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms