RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 MPRIPQ6WCQ1 1025 aa11.44□□□□□ -0.58
TMEM258-201ENST00000257262 PSDA5PKW4 1024 aaPredicted RBP11.43□□□□□ -0.58
TMEM258-201ENST00000257262 NBPF14Q5TI25 921 aa11.43□□□□□ -0.58
TMEM258-201ENST00000257262 CHADLQ6NUI6 762 aa11.43□□□□□ -0.58
TMEM258-201ENST00000257262 ZNF530Q6P9A1 599 aaPredicted RBP11.43□□□□□ -0.58
TMEM258-201ENST00000257262 NUDCQ9Y266 331 aa11.43□□□□□ -0.58
TMEM258-201ENST00000257262 LY75O60449 1722 aa11.43□□□□□ -0.58
TMEM258-201ENST00000257262 R3HDM1Q15032 1099 aaKnown RBP11.42□□□□□ -0.58
TMEM258-201ENST00000257262 C1orf141Q5JVX7 400 aa11.42□□□□□ -0.58
TMEM258-201ENST00000257262 HSP90AB1P08238 724 aaKnown RBP11.41□□□□□ -0.58
TMEM258-201ENST00000257262 U2AF1L5P0DN76 240 aaPredicted RBP11.41□□□□□ -0.58
TMEM258-201ENST00000257262 U2AF1Q01081 240 aaKnown RBP eCLIP11.41□□□□□ -0.58
TMEM258-201ENST00000257262 MTHFSDQ2M296 383 aaKnown RBP11.41□□□□□ -0.58
TMEM258-201ENST00000257262 PIGBQ92521 554 aa11.41□□□□□ -0.58
TMEM258-201ENST00000257262 DCAF5Q96JK2 942 aa11.41□□□□□ -0.58
TMEM258-201ENST00000257262 VIRMAQ69YN4 1812 aaKnown RBP11.41□□□□□ -0.58
TMEM258-201ENST00000257262 AKAP4Q5JQC9 854 aa11.4□□□□□ -0.58
TMEM258-201ENST00000257262 LRRC4BQ9NT99 713 aa11.4□□□□□ -0.58
TMEM258-201ENST00000257262 TMOD3Q9NYL9 352 aa11.4□□□□□ -0.58
TMEM258-201ENST00000257262 SCN11AQ9UI33 1791 aa11.4□□□□□ -0.58
TMEM258-201ENST00000257262 MYBBP1AQ9BQG0 1328 aaKnown RBP11.39□□□□□ -0.59
TMEM258-201ENST00000257262 ERVV-2B6SEH9 535 aa11.39□□□□□ -0.59
TMEM258-201ENST00000257262 KDM6AO15550 1401 aaPredicted RBP11.39□□□□□ -0.59
TMEM258-201ENST00000257262 PRKAR2BP31323 418 aa11.39□□□□□ -0.59
TMEM258-201ENST00000257262 KCNQ4P56696 695 aa11.39□□□□□ -0.59
TMEM258-201ENST00000257262 PHACTR3Q96KR7 559 aa11.39□□□□□ -0.59
TMEM258-201ENST00000257262 RSPH6AQ9H0K4 717 aa11.39□□□□□ -0.59
TMEM258-201ENST00000257262 PRKRIP1Q9H875 184 aaPredicted RBP11.39□□□□□ -0.59
TMEM258-201ENST00000257262 ANO8Q9HCE9 1232 aaPredicted RBP11.39□□□□□ -0.59
TMEM258-201ENST00000257262 FCHSD2O94868 740 aa11.38□□□□□ -0.59
TMEM258-201ENST00000257262 SLC27A3Q5K4L6 730 aa11.38□□□□□ -0.59
TMEM258-201ENST00000257262 SP7Q8TDD2 431 aaPredicted RBP11.38□□□□□ -0.59
TMEM258-201ENST00000257262 LGR6Q9HBX8 967 aa11.38□□□□□ -0.59
TMEM258-201ENST00000257262 PAPPAQ13219 1627 aa11.38□□□□□ -0.59
TMEM258-201ENST00000257262 CABP4P57796 275 aa11.37□□□□□ -0.59
TMEM258-201ENST00000257262 FKBP8Q14318 412 aa11.37□□□□□ -0.59
TMEM258-201ENST00000257262 SLC15A2Q16348 729 aa11.37□□□□□ -0.59
TMEM258-201ENST00000257262 NFATC2IPQ8NCF5 419 aa11.37□□□□□ -0.59
TMEM258-201ENST00000257262 SMARCC1Q92922 1105 aaPredicted RBP11.37□□□□□ -0.59
TMEM258-201ENST00000257262 ATG3Q9NT62 314 aa11.37□□□□□ -0.59
TMEM258-201ENST00000257262 STK32BQ9NY57 414 aa11.37□□□□□ -0.59
TMEM258-201ENST00000257262 CCNL1Q9UK58 526 aaPredicted RBP11.37□□□□□ -0.59
TMEM258-201ENST00000257262 ASAP1Q9ULH1 1129 aa11.37□□□□□ -0.59
TMEM258-201ENST00000257262 PALLDQ8WX93 1383 aa11.37□□□□□ -0.59
TMEM258-201ENST00000257262 RNMTO43148 476 aaKnown RBP11.36□□□□□ -0.59
TMEM258-201ENST00000257262 GAS2L2Q8NHY3 880 aa11.36□□□□□ -0.59
TMEM258-201ENST00000257262 TAF1LQ8IZX4 1826 aa11.36□□□□□ -0.59
TMEM258-201ENST00000257262 ADAMTS7Q9UKP4 1686 aa11.36□□□□□ -0.59
TMEM258-201ENST00000257262 GNAT3A8MTJ3 354 aa11.35□□□□□ -0.59
TMEM258-201ENST00000257262 C5P01031 1676 aa11.35□□□□□ -0.59
TMEM258-201ENST00000257262 ZNF827Q17R98 1081 aa11.34□□□□□ -0.59
TMEM258-201ENST00000257262 PDGFDQ9GZP0 370 aaPredicted RBP11.34□□□□□ -0.59
TMEM258-201ENST00000257262 SLC52A2Q9HAB3 445 aa11.34□□□□□ -0.59
TMEM258-201ENST00000257262 FARP1Q9Y4F1 1045 aaPredicted RBP11.34□□□□□ -0.59
TMEM258-201ENST00000257262 CASZ1Q86V15 1759 aa11.33□□□□□ -0.59
TMEM258-201ENST00000257262 MAP3K5Q99683 1374 aa11.33□□□□□ -0.6
TMEM258-201ENST00000257262 LOC102724428A0A0B4J2F2 783 aa11.33□□□□□ -0.6
TMEM258-201ENST00000257262 SIK1P57059 783 aa11.33□□□□□ -0.6
TMEM258-201ENST00000257262 IL17REQ8NFR9 667 aa11.33□□□□□ -0.6
TMEM258-201ENST00000257262 PLEKHF1Q96S99 279 aa11.33□□□□□ -0.6
TMEM258-201ENST00000257262 CREBZFQ9NS37 354 aa11.33□□□□□ -0.6
TMEM258-201ENST00000257262 DLG5Q8TDM6 1919 aa11.33□□□□□ -0.6
TMEM258-201ENST00000257262 TUBGCP6Q96RT7 1819 aa11.32□□□□□ -0.6
TMEM258-201ENST00000257262 QSER1Q2KHR3 1735 aa11.32□□□□□ -0.6
TMEM258-201ENST00000257262 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
TMEM258-201ENST00000257262 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
TMEM258-201ENST00000257262 PNNQ9H307 717 aaKnown RBP11.32□□□□□ -0.6
TMEM258-201ENST00000257262 ZNF831Q5JPB2 1677 aa11.32□□□□□ -0.6
TMEM258-201ENST00000257262 MRC1P22897 1456 aa11.32□□□□□ -0.6
TMEM258-201ENST00000257262 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
TMEM258-201ENST00000257262 NEFMP07197 916 aa11.31□□□□□ -0.6
TMEM258-201ENST00000257262 ITPK1Q13572 414 aa11.31□□□□□ -0.6
TMEM258-201ENST00000257262 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
TMEM258-201ENST00000257262 TFCP2L1Q9NZI6 479 aa11.31□□□□□ -0.6
TMEM258-201ENST00000257262 C4BP0C0L5 1744 aa11.31□□□□□ -0.6
TMEM258-201ENST00000257262 ANP32CO43423 234 aa11.3□□□□□ -0.6
TMEM258-201ENST00000257262 PTCD1O75127 700 aaKnown RBP11.3□□□□□ -0.6
TMEM258-201ENST00000257262 HMGB2P26583 209 aaKnown RBP11.3□□□□□ -0.6
TMEM258-201ENST00000257262 TEFQ10587 303 aa11.3□□□□□ -0.6
TMEM258-201ENST00000257262 SLC39A6Q13433 755 aa11.3□□□□□ -0.6
TMEM258-201ENST00000257262 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
TMEM258-201ENST00000257262 CCDC184Q52MB2 194 aa11.3□□□□□ -0.6
TMEM258-201ENST00000257262 MCM10Q7L590 875 aa11.3□□□□□ -0.6
TMEM258-201ENST00000257262 LINC00116Q8NCU8 138 aa11.3□□□□□ -0.6
TMEM258-201ENST00000257262 LRP5O75197 1615 aa11.3□□□□□ -0.6
TMEM258-201ENST00000257262 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
TMEM258-201ENST00000257262 DCTN1Q14203 1278 aa11.29□□□□□ -0.6
TMEM258-201ENST00000257262 RTF1Q92541 710 aaKnown RBP11.29□□□□□ -0.6
TMEM258-201ENST00000257262 ADAMTS8Q9UP79 889 aa11.29□□□□□ -0.6
TMEM258-201ENST00000257262 MAPK8IP3Q9UPT6 1336 aa11.29□□□□□ -0.6
TMEM258-201ENST00000257262 COL5A3P25940 1745 aaPredicted RBP11.29□□□□□ -0.6
TMEM258-201ENST00000257262 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
TMEM258-201ENST00000257262 HTATSF1O43719 755 aaKnown RBP11.28□□□□□ -0.6
TMEM258-201ENST00000257262 ZBTB7AO95365 584 aa11.28□□□□□ -0.6
TMEM258-201ENST00000257262 NFE2L2Q16236 605 aa11.28□□□□□ -0.6
TMEM258-201ENST00000257262 CCDC146Q8IYE0 955 aa11.28□□□□□ -0.6
TMEM258-201ENST00000257262 SPON1Q9HCB6 807 aa11.28□□□□□ -0.6
TMEM258-201ENST00000257262 TJP1Q07157 1748 aa11.28□□□□□ -0.6
TMEM258-201ENST00000257262 UBR2Q8IWV8 1755 aa11.28□□□□□ -0.6
TMEM258-201ENST00000257262 UBR3Q6ZT12 1888 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms