RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 SLC15A2Q16348 729 aa28.66■■■□□ 2.18
NXT1-201ENST00000254998 CEMIPQ8WUJ3 1361 aa28.65■■■□□ 2.18
NXT1-201ENST00000254998 IL17REQ8NFR9 667 aa28.65■■■□□ 2.18
NXT1-201ENST00000254998 LOC102724428A0A0B4J2F2 783 aa28.64■■■□□ 2.18
NXT1-201ENST00000254998 HTATSF1O43719 755 aaKnown RBP28.64■■■□□ 2.18
NXT1-201ENST00000254998 KCNQ4P56696 695 aa28.64■■■□□ 2.18
NXT1-201ENST00000254998 SIK1P57059 783 aa28.64■■■□□ 2.18
NXT1-201ENST00000254998 WDR43Q15061 677 aaKnown RBP eCLIP28.64■■■□□ 2.18
NXT1-201ENST00000254998 AKT1S1Q96B36 256 aa28.64■■■□□ 2.18
NXT1-201ENST00000254998 ZNF831Q5JPB2 1677 aa28.62■■■□□ 2.17
NXT1-201ENST00000254998 MAPK8IP3Q9UPT6 1336 aa28.62■■■□□ 2.17
NXT1-201ENST00000254998 C5P01031 1676 aa28.61■■■□□ 2.17
NXT1-201ENST00000254998 ZNF827Q17R98 1081 aa28.61■■■□□ 2.17
NXT1-201ENST00000254998 TAF1LQ8IZX4 1826 aa28.61■■■□□ 2.17
NXT1-201ENST00000254998 NFE2L2Q16236 605 aa28.6■■■□□ 2.17
NXT1-201ENST00000254998 RTF1Q92541 710 aaKnown RBP28.59■■■□□ 2.17
NXT1-201ENST00000254998 SIPA1L3O60292 1781 aaPredicted RBP28.58■■■□□ 2.17
NXT1-201ENST00000254998 TEFQ10587 303 aa28.58■■■□□ 2.17
NXT1-201ENST00000254998 ADAMTS8Q9UP79 889 aa28.58■■■□□ 2.17
NXT1-201ENST00000254998 QSER1Q2KHR3 1735 aa28.57■■■□□ 2.16
NXT1-201ENST00000254998 CASZ1Q86V15 1759 aa28.57■■■□□ 2.16
NXT1-201ENST00000254998 SLC4A9Q96Q91 983 aa28.56■■■□□ 2.16
NXT1-201ENST00000254998 DLG5Q8TDM6 1919 aa28.55■■■□□ 2.16
NXT1-201ENST00000254998 ATP6V1AP38606 617 aa28.55■■■□□ 2.16
NXT1-201ENST00000254998 ITPK1Q13572 414 aa28.55■■■□□ 2.16
NXT1-201ENST00000254998 CCDC184Q52MB2 194 aa28.55■■■□□ 2.16
NXT1-201ENST00000254998 RUNDC1Q96C34 613 aa28.55■■■□□ 2.16
NXT1-201ENST00000254998 RBM42Q9BTD8 480 aaKnown RBP28.55■■■□□ 2.16
NXT1-201ENST00000254998 CICQ96RK0 1608 aaPredicted RBP28.54■■■□□ 2.16
NXT1-201ENST00000254998 C4BP0C0L5 1744 aa28.54■■■□□ 2.16
NXT1-201ENST00000254998 MCM10Q7L590 875 aa28.53■■■□□ 2.16
NXT1-201ENST00000254998 PTCD1O75127 700 aaKnown RBP28.52■■■□□ 2.16
NXT1-201ENST00000254998 SLC39A6Q13433 755 aa28.52■■■□□ 2.16
NXT1-201ENST00000254998 LINC00116Q8NCU8 138 aa28.52■■■□□ 2.16
NXT1-201ENST00000254998 TFCP2L1Q9NZI6 479 aa28.52■■■□□ 2.16
NXT1-201ENST00000254998 KCPQ6ZWJ8 1503 aa28.52■■■□□ 2.16
NXT1-201ENST00000254998 TUBGCP6Q96RT7 1819 aa28.52■■■□□ 2.16
NXT1-201ENST00000254998 LRP5O75197 1615 aa28.51■■■□□ 2.15
NXT1-201ENST00000254998 UBR2Q8IWV8 1755 aa28.5■■■□□ 2.15
NXT1-201ENST00000254998 TMPOP42166 694 aaKnown RBP28.5■■■□□ 2.15
NXT1-201ENST00000254998 CCDC146Q8IYE0 955 aa28.5■■■□□ 2.15
NXT1-201ENST00000254998 PNPLA7Q6ZV29 1317 aa28.49■■■□□ 2.15
NXT1-201ENST00000254998 DCTN1Q14203 1278 aa28.49■■■□□ 2.15
NXT1-201ENST00000254998 PDGFDQ9GZP0 370 aaPredicted RBP28.49■■■□□ 2.15
NXT1-201ENST00000254998 MRS2Q9HD23 443 aa28.49■■■□□ 2.15
NXT1-201ENST00000254998 COL5A3P25940 1745 aaPredicted RBP28.49■■■□□ 2.15
NXT1-201ENST00000254998 ZNF790Q6PG37 636 aa28.48■■■□□ 2.15
NXT1-201ENST00000254998 RIPK4P57078 832 aa28.47■■■□□ 2.15
NXT1-201ENST00000254998 RC3H1Q5TC82 1133 aaKnown RBP28.47■■■□□ 2.15
NXT1-201ENST00000254998 TTC5Q8N0Z6 440 aa28.47■■■□□ 2.15
NXT1-201ENST00000254998 VSIG10Q8N0Z9 540 aa28.47■■■□□ 2.15
NXT1-201ENST00000254998 PNISRQ8TF01 805 aaKnown RBP28.47■■■□□ 2.15
NXT1-201ENST00000254998 AK7Q96M32 723 aa28.47■■■□□ 2.15
NXT1-201ENST00000254998 TJP1Q07157 1748 aa28.46■■■□□ 2.15
NXT1-201ENST00000254998 LMOD3Q0VAK6 560 aa28.46■■■□□ 2.15
NXT1-201ENST00000254998 FLAD1Q8NFF5 587 aa28.46■■■□□ 2.15
NXT1-201ENST00000254998 CNTNAP4Q9C0A0 1308 aa28.45■■■□□ 2.15
NXT1-201ENST00000254998 UBR3Q6ZT12 1888 aa28.45■■■□□ 2.15
NXT1-201ENST00000254998 BTBD11A6QL63 1104 aa28.45■■■□□ 2.14
NXT1-201ENST00000254998 TAF7Q15545 349 aaPredicted RBP28.45■■■□□ 2.14
NXT1-201ENST00000254998 SLC16A10Q8TF71 515 aa28.44■■■□□ 2.14
NXT1-201ENST00000254998 SPON1Q9HCB6 807 aa28.43■■■□□ 2.14
NXT1-201ENST00000254998 SSFA2P28290 1259 aa28.42■■■□□ 2.14
NXT1-201ENST00000254998 ZNF496Q96IT1 587 aaPredicted RBP28.42■■■□□ 2.14
NXT1-201ENST00000254998 MTFR1LQ9H019 292 aa28.42■■■□□ 2.14
NXT1-201ENST00000254998 SRCAPQ6ZRS2 3230 aa28.41■■■□□ 2.14
NXT1-201ENST00000254998 COL23A1Q86Y22 540 aaPredicted RBP28.41■■■□□ 2.14
NXT1-201ENST00000254998 HEG1Q9ULI3 1381 aa28.4■■■□□ 2.14
NXT1-201ENST00000254998 GNPATO15228 680 aa28.4■■■□□ 2.14
NXT1-201ENST00000254998 DNAJC10Q8IXB1 793 aa28.4■■■□□ 2.14
NXT1-201ENST00000254998 FMNL2Q96PY5 1086 aa28.4■■■□□ 2.14
NXT1-201ENST00000254998 THUMPD2Q9BTF0 503 aaKnown RBP28.4■■■□□ 2.14
NXT1-201ENST00000254998 RRP7AQ9Y3A4 280 aaKnown RBP28.4■■■□□ 2.14
NXT1-201ENST00000254998 MYH14Q7Z406 1995 aaKnown RBP28.39■■■□□ 2.14
NXT1-201ENST00000254998 ZBTB7AO95365 584 aa28.39■■■□□ 2.14
NXT1-201ENST00000254998 AMIGO3Q86WK7 504 aa28.39■■■□□ 2.14
NXT1-201ENST00000254998 KCNQ3O43525 872 aa28.38■■■□□ 2.13
NXT1-201ENST00000254998 CRKLP46109 303 aaKnown RBP28.38■■■□□ 2.13
NXT1-201ENST00000254998 TRIM35Q9UPQ4 493 aa28.38■■■□□ 2.13
NXT1-201ENST00000254998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.37■■■□□ 2.13
NXT1-201ENST00000254998 RPS6KA4O75676 772 aa28.37■■■□□ 2.13
NXT1-201ENST00000254998 CYP19A1P11511 503 aaPredicted RBP28.37■■■□□ 2.13
NXT1-201ENST00000254998 TEX13AQ9BXU3 409 aaPredicted RBP28.37■■■□□ 2.13
NXT1-201ENST00000254998 APAF1O14727 1248 aa28.36■■■□□ 2.13
NXT1-201ENST00000254998 NEUROD2Q15784 382 aa28.36■■■□□ 2.13
NXT1-201ENST00000254998 RTCBQ9Y3I0 505 aaKnown RBP28.36■■■□□ 2.13
NXT1-201ENST00000254998 COL24A1Q17RW2 1714 aa28.35■■■□□ 2.13
NXT1-201ENST00000254998 KDM3BQ7LBC6 1761 aa28.35■■■□□ 2.13
NXT1-201ENST00000254998 ADRA2BP18089 450 aa28.35■■■□□ 2.13
NXT1-201ENST00000254998 INTS5Q6P9B9 1019 aaKnown RBP28.35■■■□□ 2.13
NXT1-201ENST00000254998 BABAM1Q9NWV8 329 aa28.35■■■□□ 2.13
NXT1-201ENST00000254998 PTGER2P43116 358 aa28.34■■■□□ 2.13
NXT1-201ENST00000254998 SGIP1Q9BQI5 828 aa28.34■■■□□ 2.13
NXT1-201ENST00000254998 CCDC87Q9NVE4 849 aa28.34■■■□□ 2.13
NXT1-201ENST00000254998 ATF5Q9Y2D1 282 aaPredicted RBP28.34■■■□□ 2.13
NXT1-201ENST00000254998 MSH5O43196 834 aa28.33■■■□□ 2.13
NXT1-201ENST00000254998 PHF14O94880 888 aa28.33■■■□□ 2.13
NXT1-201ENST00000254998 STARD3NLO95772 234 aa28.33■■■□□ 2.13
NXT1-201ENST00000254998 MIS18AQ9NYP9 233 aa28.32■■■□□ 2.12
NXT1-201ENST00000254998 SMIM5Q71RC9 77 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms