RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 RRP12Q5JTH9 1297 aaKnown RBP20.42■□□□□ 0.86
ACTN4-201ENST00000252699 ZNF652Q9Y2D9 606 aa20.42■□□□□ 0.86
ACTN4-201ENST00000252699 GOLGA6L19H0YKK7 550 aa20.42■□□□□ 0.86
ACTN4-201ENST00000252699 SLC39A6Q13433 755 aa20.42■□□□□ 0.86
ACTN4-201ENST00000252699 METTL24Q5JXM2 366 aa20.42■□□□□ 0.86
ACTN4-201ENST00000252699 IGHMBP2P38935 993 aaKnown RBP20.41■□□□□ 0.86
ACTN4-201ENST00000252699 IP6K1Q92551 441 aa20.41■□□□□ 0.86
ACTN4-201ENST00000252699 TSPYL6Q8N831 410 aa20.41■□□□□ 0.86
ACTN4-201ENST00000252699 CHPF2Q9P2E5 772 aa20.41■□□□□ 0.86
ACTN4-201ENST00000252699 ATP5J2-PTCD1G3V325 749 aa20.41■□□□□ 0.86
ACTN4-201ENST00000252699 TEX13AQ9BXU3 409 aaPredicted RBP20.4■□□□□ 0.86
ACTN4-201ENST00000252699 PCDHB15Q9Y5E8 787 aa20.4■□□□□ 0.86
ACTN4-201ENST00000252699 K7ELQ4 463 aaPredicted RBP20.4■□□□□ 0.86
ACTN4-201ENST00000252699 TOM1O60784 492 aa20.4■□□□□ 0.86
ACTN4-201ENST00000252699 PDCP20941 246 aa20.4■□□□□ 0.86
ACTN4-201ENST00000252699 MRPL50Q8N5N7 158 aaKnown RBP20.4■□□□□ 0.86
ACTN4-201ENST00000252699 VAMP4O75379 141 aa20.4■□□□□ 0.86
ACTN4-201ENST00000252699 HSP90AB3PQ58FF7 597 aa20.4■□□□□ 0.86
ACTN4-201ENST00000252699 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.4■□□□□ 0.86
ACTN4-201ENST00000252699 ZSCAN25Q6NSZ9 544 aa20.39■□□□□ 0.86
ACTN4-201ENST00000252699 BOLA2Q9H3K6 86 aa20.39■□□□□ 0.86
ACTN4-201ENST00000252699 TRMT112Q9UI30 125 aaKnown RBP20.39■□□□□ 0.86
ACTN4-201ENST00000252699 SF3B2Q13435 895 aaKnown RBP20.39■□□□□ 0.86
ACTN4-201ENST00000252699 MEIS3Q99687 375 aa20.39■□□□□ 0.86
ACTN4-201ENST00000252699 SPINK5Q9NQ38 1064 aaPredicted RBP20.39■□□□□ 0.86
ACTN4-201ENST00000252699 GPTP24298 496 aa20.39■□□□□ 0.85
ACTN4-201ENST00000252699 KRT24Q2M2I5 525 aa20.39■□□□□ 0.85
ACTN4-201ENST00000252699 MTMR7Q9Y216 660 aa20.39■□□□□ 0.85
ACTN4-201ENST00000252699 CCDC8Q9H0W5 538 aaPredicted RBP20.38■□□□□ 0.85
ACTN4-201ENST00000252699 IL13P35225 146 aa20.38■□□□□ 0.85
ACTN4-201ENST00000252699 IFIT5Q13325 482 aaKnown RBP20.38■□□□□ 0.85
ACTN4-201ENST00000252699 UBE3BQ7Z3V4 1068 aa20.38■□□□□ 0.85
ACTN4-201ENST00000252699 NACAP1Q9BZK3 213 aa20.38■□□□□ 0.85
ACTN4-201ENST00000252699 UBAP1LF5GYI3 381 aa20.38■□□□□ 0.85
ACTN4-201ENST00000252699 PPP1R42Q7Z4L9 355 aa20.38■□□□□ 0.85
ACTN4-201ENST00000252699 BLOC1S2Q6QNY1 142 aa20.38■□□□□ 0.85
ACTN4-201ENST00000252699 ANKRD13DQ6ZTN6 518 aa20.37■□□□□ 0.85
ACTN4-201ENST00000252699 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.37■□□□□ 0.85
ACTN4-201ENST00000252699 TNNQ9UQP3 1299 aa20.37■□□□□ 0.85
ACTN4-201ENST00000252699 AKAP2Q9Y2D5 859 aa20.37■□□□□ 0.85
ACTN4-201ENST00000252699 PLEKHG3A1L390 1219 aa20.37■□□□□ 0.85
ACTN4-201ENST00000252699 ZPR1O75312 459 aa20.37■□□□□ 0.85
ACTN4-201ENST00000252699 IDH1O75874 414 aaKnown RBP20.37■□□□□ 0.85
ACTN4-201ENST00000252699 CCDC73Q6ZRK6 1079 aa20.37■□□□□ 0.85
ACTN4-201ENST00000252699 SIRT1Q96EB6 747 aa20.36■□□□□ 0.85
ACTN4-201ENST00000252699 KDM5DQ9BY66 1539 aa20.36■□□□□ 0.85
ACTN4-201ENST00000252699 KDM4AO75164 1064 aa20.36■□□□□ 0.85
ACTN4-201ENST00000252699 SBNO2Q9Y2G9 1366 aa20.36■□□□□ 0.85
ACTN4-201ENST00000252699 UGGT1Q9NYU2 1555 aa20.36■□□□□ 0.85
ACTN4-201ENST00000252699 JAKMIP1Q96N16 626 aaKnown RBP20.36■□□□□ 0.85
ACTN4-201ENST00000252699 MAGI2Q86UL8 1455 aa20.36■□□□□ 0.85
ACTN4-201ENST00000252699 TPD52L1Q16890 204 aaPredicted RBP20.36■□□□□ 0.85
ACTN4-201ENST00000252699 ANKRD1Q15327 319 aa20.35■□□□□ 0.85
ACTN4-201ENST00000252699 SLC3A2P08195 630 aaKnown RBP20.35■□□□□ 0.85
ACTN4-201ENST00000252699 HDAC1Q13547 482 aaPredicted RBP20.35■□□□□ 0.85
ACTN4-201ENST00000252699 STK3Q13188 491 aa20.35■□□□□ 0.85
ACTN4-201ENST00000252699 XAGE3Q8WTP9 111 aa20.35■□□□□ 0.85
ACTN4-201ENST00000252699 COPS6Q7L5N1 327 aa20.34■□□□□ 0.85
ACTN4-201ENST00000252699 RLBP1P12271 317 aa20.34■□□□□ 0.85
ACTN4-201ENST00000252699 NFATC2IPQ8NCF5 419 aa20.34■□□□□ 0.85
ACTN4-201ENST00000252699 CWC22Q9HCG8 908 aaKnown RBP20.34■□□□□ 0.85
ACTN4-201ENST00000252699 CWC25Q9NXE8 425 aaPredicted RBP20.34■□□□□ 0.85
ACTN4-201ENST00000252699 MAP3K5Q99683 1374 aa20.34■□□□□ 0.85
ACTN4-201ENST00000252699 LRP2BPQ9P2M1 347 aa20.34■□□□□ 0.85
ACTN4-201ENST00000252699 CTDP1Q9Y5B0 961 aaPredicted RBP20.34■□□□□ 0.85
ACTN4-201ENST00000252699 PES1O00541 588 aaKnown RBP20.33■□□□□ 0.85
ACTN4-201ENST00000252699 XBP1P17861 261 aa20.33■□□□□ 0.85
ACTN4-201ENST00000252699 STK11IPQ8N1F8 1099 aa20.33■□□□□ 0.85
ACTN4-201ENST00000252699 CTNNA3Q9UI47 895 aa20.33■□□□□ 0.85
ACTN4-201ENST00000252699 JARID2Q92833 1246 aaPredicted RBP20.33■□□□□ 0.85
ACTN4-201ENST00000252699 SBNO1A3KN83 1393 aa20.33■□□□□ 0.85
ACTN4-201ENST00000252699 TRAK2O60296 914 aa20.33■□□□□ 0.84
ACTN4-201ENST00000252699 IL2RBP14784 551 aa20.33■□□□□ 0.84
ACTN4-201ENST00000252699 RAI14Q9P0K7 980 aa20.33■□□□□ 0.84
ACTN4-201ENST00000252699 IFIT1P09914 478 aaKnown RBP20.33■□□□□ 0.84
ACTN4-201ENST00000252699 ABCF2Q9UG63 623 aa20.32■□□□□ 0.84
ACTN4-201ENST00000252699 SAMD1Q6SPF0 538 aaPredicted RBP20.32■□□□□ 0.84
ACTN4-201ENST00000252699 BMP2KLQ5H9B9 411 aa20.32■□□□□ 0.84
ACTN4-201ENST00000252699 PDRG1Q9NUG6 133 aa20.32■□□□□ 0.84
ACTN4-201ENST00000252699 UPF3BQ9BZI7 483 aaKnown RBP20.31■□□□□ 0.84
ACTN4-201ENST00000252699 KRT32Q14532 448 aa20.31■□□□□ 0.84
ACTN4-201ENST00000252699 ECHDC1Q9NTX5 307 aa20.31■□□□□ 0.84
ACTN4-201ENST00000252699 PLA2R1Q13018 1463 aa20.31■□□□□ 0.84
ACTN4-201ENST00000252699 PRPF40AO75400 957 aaKnown RBP20.31■□□□□ 0.84
ACTN4-201ENST00000252699 PPP1R1BQ9UD71 204 aaPredicted RBP20.3■□□□□ 0.84
ACTN4-201ENST00000252699 METP08581 1390 aa20.3■□□□□ 0.84
ACTN4-201ENST00000252699 FIBPO43427 364 aa20.3■□□□□ 0.84
ACTN4-201ENST00000252699 ANKRD44Q8N8A2 993 aa20.3■□□□□ 0.84
ACTN4-201ENST00000252699 BRMS1Q9HCU9 246 aa20.3■□□□□ 0.84
ACTN4-201ENST00000252699 ANKRD18BA2A2Z9 1011 aa20.3■□□□□ 0.84
ACTN4-201ENST00000252699 HMGB2P26583 209 aaKnown RBP20.3■□□□□ 0.84
ACTN4-201ENST00000252699 KSR2Q6VAB6 950 aa20.3■□□□□ 0.84
ACTN4-201ENST00000252699 ATP2B1P20020 1258 aa20.29■□□□□ 0.84
ACTN4-201ENST00000252699 SASS6Q6UVJ0 657 aa20.29■□□□□ 0.84
ACTN4-201ENST00000252699 HOOK1Q9UJC3 728 aaKnown RBP20.29■□□□□ 0.84
ACTN4-201ENST00000252699 TDO2P48775 406 aa20.29■□□□□ 0.84
ACTN4-201ENST00000252699 KAT6BQ8WYB5 2073 aa20.29■□□□□ 0.84
ACTN4-201ENST00000252699 HECW2Q9P2P5 1572 aa20.29■□□□□ 0.84
ACTN4-201ENST00000252699 PIP4K2AP48426 406 aaPredicted RBP20.29■□□□□ 0.84
ACTN4-201ENST00000252699 DCAF5Q96JK2 942 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms