RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 DCCP43146 1447 aa31.38■■■□□ 2.61
TMEM55B-201ENST00000250489 DEKP35659 375 aaKnown RBP31.38■■■□□ 2.61
TMEM55B-201ENST00000250489 NFKBIBQ15653 356 aa31.38■■■□□ 2.61
TMEM55B-201ENST00000250489 TBC1D2Q9BYX2 928 aa31.38■■■□□ 2.61
TMEM55B-201ENST00000250489 ATF3P18847 181 aa31.37■■■□□ 2.61
TMEM55B-201ENST00000250489 HDGFL1Q5TGJ6 251 aa31.37■■■□□ 2.61
TMEM55B-201ENST00000250489 AXIN2Q9Y2T1 843 aa31.37■■■□□ 2.61
TMEM55B-201ENST00000250489 PXDNQ92626 1479 aa31.37■■■□□ 2.61
TMEM55B-201ENST00000250489 EIF4A1P60842 406 aaKnown RBP31.36■■■□□ 2.61
TMEM55B-201ENST00000250489 PXDNLA1KZ92 1463 aa31.36■■■□□ 2.61
TMEM55B-201ENST00000250489 NCOA3Q9Y6Q9 1424 aa31.36■■■□□ 2.61
TMEM55B-201ENST00000250489 HMMRO75330 724 aa31.35■■■□□ 2.61
TMEM55B-201ENST00000250489 RBM25P49756 843 aaKnown RBP31.34■■■□□ 2.61
TMEM55B-201ENST00000250489 GNAI2P04899 355 aa31.34■■■□□ 2.61
TMEM55B-201ENST00000250489 OVOS2A0A0G2JMS6 1433 aa31.33■■■□□ 2.61
TMEM55B-201ENST00000250489 HOXB7P09629 217 aa31.33■■■□□ 2.61
TMEM55B-201ENST00000250489 GSPT1P15170 499 aaKnown RBP31.33■■■□□ 2.61
TMEM55B-201ENST00000250489 TEFQ10587 303 aa31.33■■■□□ 2.61
TMEM55B-201ENST00000250489 RGPD5Q99666 1765 aa31.32■■■□□ 2.61
TMEM55B-201ENST00000250489 MPRIPQ6WCQ1 1025 aa31.32■■■□□ 2.6
TMEM55B-201ENST00000250489 TBC1D9Q6ZT07 1266 aa31.32■■■□□ 2.6
TMEM55B-201ENST00000250489 C16orf71Q8IYS4 520 aaPredicted RBP31.32■■■□□ 2.6
TMEM55B-201ENST00000250489 GNAI3P08754 354 aa31.31■■■□□ 2.6
TMEM55B-201ENST00000250489 RNMTO43148 476 aaKnown RBP31.3■■■□□ 2.6
TMEM55B-201ENST00000250489 C1orf141Q5JVX7 400 aa31.3■■■□□ 2.6
TMEM55B-201ENST00000250489 TTC22Q5TAA0 569 aa31.3■■■□□ 2.6
TMEM55B-201ENST00000250489 KCNQ3O43525 872 aa31.29■■■□□ 2.6
TMEM55B-201ENST00000250489 CDC45O75419 566 aa31.29■■■□□ 2.6
TMEM55B-201ENST00000250489 ERBB3P21860 1342 aa31.29■■■□□ 2.6
TMEM55B-201ENST00000250489 BTBD11A6QL63 1104 aa31.28■■■□□ 2.6
TMEM55B-201ENST00000250489 SMARCA5O60264 1052 aaPredicted RBP31.28■■■□□ 2.6
TMEM55B-201ENST00000250489 ZC3H6P61129 1189 aaKnown RBP31.28■■■□□ 2.6
TMEM55B-201ENST00000250489 OTUD7AQ8TE49 926 aaPredicted RBP31.28■■■□□ 2.6
TMEM55B-201ENST00000250489 PHAXQ9H814 394 aaKnown RBP31.28■■■□□ 2.6
TMEM55B-201ENST00000250489 LMTK3Q96Q04 1460 aa31.27■■■□□ 2.6
TMEM55B-201ENST00000250489 CHMP4AQ9BY43 222 aa31.26■■■□□ 2.6
TMEM55B-201ENST00000250489 DDX17Q92841 729 aaKnown RBP31.26■■■□□ 2.59
TMEM55B-201ENST00000250489 ANTXR1Q9H6X2 564 aa31.26■■■□□ 2.59
TMEM55B-201ENST00000250489 APBB1O00213 710 aa31.25■■■□□ 2.59
TMEM55B-201ENST00000250489 EIF2S2P20042 333 aaKnown RBP31.25■■■□□ 2.59
TMEM55B-201ENST00000250489 SLKQ9H2G2 1235 aaPredicted RBP31.25■■■□□ 2.59
TMEM55B-201ENST00000250489 CADPS2Q86UW7 1296 aa31.24■■■□□ 2.59
TMEM55B-201ENST00000250489 ADAMTS7Q9UKP4 1686 aa31.23■■■□□ 2.59
TMEM55B-201ENST00000250489 BCL11AQ9H165 835 aa31.23■■■□□ 2.59
TMEM55B-201ENST00000250489 CHPF2Q9P2E5 772 aa31.23■■■□□ 2.59
TMEM55B-201ENST00000250489 ATP8B2P98198 1209 aa31.22■■■□□ 2.59
TMEM55B-201ENST00000250489 USP44Q9H0E7 712 aa31.22■■■□□ 2.59
TMEM55B-201ENST00000250489 SIPA1L3O60292 1781 aaPredicted RBP31.22■■■□□ 2.59
TMEM55B-201ENST00000250489 NPHP3Q7Z494 1330 aa31.22■■■□□ 2.59
TMEM55B-201ENST00000250489 COL18A1P39060 1754 aa31.21■■■□□ 2.59
TMEM55B-201ENST00000250489 TNS3Q68CZ2 1445 aa31.2■■■□□ 2.59
TMEM55B-201ENST00000250489 FRAT2O75474 233 aaPredicted RBP31.19■■■□□ 2.58
TMEM55B-201ENST00000250489 HSPA2P54652 639 aa31.19■■■□□ 2.58
TMEM55B-201ENST00000250489 LRRFIP2Q9Y608 721 aaKnown RBP31.19■■■□□ 2.58
TMEM55B-201ENST00000250489 PNMA6EA0A0J9YXQ4 647 aa31.19■■■□□ 2.58
TMEM55B-201ENST00000250489 HEG1Q9ULI3 1381 aa31.18■■■□□ 2.58
TMEM55B-201ENST00000250489 CRYBG1Q9Y4K1 1723 aa31.18■■■□□ 2.58
TMEM55B-201ENST00000250489 EIF5BO60841 1220 aaKnown RBP31.17■■■□□ 2.58
TMEM55B-201ENST00000250489 EXOC6BQ9Y2D4 811 aa31.17■■■□□ 2.58
TMEM55B-201ENST00000250489 UBTFL1P0CB47 393 aaPredicted RBP31.17■■■□□ 2.58
TMEM55B-201ENST00000250489 HSCBQ8IWL3 235 aa31.17■■■□□ 2.58
TMEM55B-201ENST00000250489 KIF2CQ99661 725 aa31.17■■■□□ 2.58
TMEM55B-201ENST00000250489 SRCIN1Q9C0H9 1055 aa31.17■■■□□ 2.58
TMEM55B-201ENST00000250489 SNX21Q969T3 373 aa31.16■■■□□ 2.58
TMEM55B-201ENST00000250489 OSBPL3Q9H4L5 887 aa31.16■■■□□ 2.58
TMEM55B-201ENST00000250489 SDSP20132 328 aa31.16■■■□□ 2.58
TMEM55B-201ENST00000250489 NLRP2Q9NX02 1062 aa31.15■■■□□ 2.58
TMEM55B-201ENST00000250489 ABCC6O95255 1503 aa31.14■■■□□ 2.58
TMEM55B-201ENST00000250489 GIGYF1O75420 1035 aaPredicted RBP31.14■■■□□ 2.58
TMEM55B-201ENST00000250489 RAPGEF4Q8WZA2 1011 aa31.14■■■□□ 2.58
TMEM55B-201ENST00000250489 IBTKQ9P2D0 1353 aaPredicted RBP31.14■■■□□ 2.58
TMEM55B-201ENST00000250489 DNAAF4Q8WXU2 420 aa31.14■■■□□ 2.57
TMEM55B-201ENST00000250489 XIRP1Q702N8 1843 aaKnown RBP31.13■■■□□ 2.57
TMEM55B-201ENST00000250489 DBF4Q9UBU7 674 aaPredicted RBP31.13■■■□□ 2.57
TMEM55B-201ENST00000250489 BEND3Q5T5X7 828 aa31.12■■■□□ 2.57
TMEM55B-201ENST00000250489 CABLES1Q8TDN4 633 aa31.12■■■□□ 2.57
TMEM55B-201ENST00000250489 LRRCC1Q9C099 1032 aa31.12■■■□□ 2.57
TMEM55B-201ENST00000250489 SPATA31A3Q5VYP0 1347 aa31.12■■■□□ 2.57
TMEM55B-201ENST00000250489 PI4KAP2A4QPH2 592 aa31.12■■■□□ 2.57
TMEM55B-201ENST00000250489 ANXA1P04083 346 aa31.12■■■□□ 2.57
TMEM55B-201ENST00000250489 PDE1AP54750 535 aa31.12■■■□□ 2.57
TMEM55B-201ENST00000250489 PI4KAP1Q8N8J0 262 aa31.12■■■□□ 2.57
TMEM55B-201ENST00000250489 SALL3Q9BXA9 1300 aa31.12■■■□□ 2.57
TMEM55B-201ENST00000250489 ADCY9O60503 1353 aa31.11■■■□□ 2.57
TMEM55B-201ENST00000250489 TATP17735 454 aaPredicted RBP31.1■■■□□ 2.57
TMEM55B-201ENST00000250489 SPRYD3Q8NCJ5 442 aa31.1■■■□□ 2.57
TMEM55B-201ENST00000250489 MEGF6O75095 1541 aa31.1■■■□□ 2.57
TMEM55B-201ENST00000250489 SCN11AQ9UI33 1791 aa31.09■■■□□ 2.57
TMEM55B-201ENST00000250489 SSH3Q8TE77 659 aa31.09■■■□□ 2.57
TMEM55B-201ENST00000250489 KDM6AO15550 1401 aaPredicted RBP31.09■■■□□ 2.57
TMEM55B-201ENST00000250489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.08■■■□□ 2.57
TMEM55B-201ENST00000250489 SPG7Q9UQ90 795 aa31.07■■■□□ 2.56
TMEM55B-201ENST00000250489 PLEKHG2Q9H7P9 1386 aa31.07■■■□□ 2.56
TMEM55B-201ENST00000250489 CASC1Q6TDU7 716 aa31.06■■■□□ 2.56
TMEM55B-201ENST00000250489 CSB-PGBD3P0DP91 1061 aa31.06■■■□□ 2.56
TMEM55B-201ENST00000250489 PHKG2P15735 406 aa31.06■■■□□ 2.56
TMEM55B-201ENST00000250489 CHRNA2Q15822 529 aa31.06■■■□□ 2.56
TMEM55B-201ENST00000250489 CPDO75976 1380 aa31.06■■■□□ 2.56
TMEM55B-201ENST00000250489 PRAMEF22A3QJZ6 481 aa31.05■■■□□ 2.56
TMEM55B-201ENST00000250489 POLA2Q14181 598 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms