RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 ERBB3P21860 1342 aa18.42■□□□□ 0.54
MBD4-201ENST00000249910 EIF4A1P60842 406 aaKnown RBP18.41■□□□□ 0.54
MBD4-201ENST00000249910 C1orf141Q5JVX7 400 aa18.41■□□□□ 0.54
MBD4-201ENST00000249910 ATP10DQ9P241 1426 aa18.41■□□□□ 0.54
MBD4-201ENST00000249910 SMARCA5O60264 1052 aaPredicted RBP18.41■□□□□ 0.54
MBD4-201ENST00000249910 OTUD7AQ8TE49 926 aaPredicted RBP18.4■□□□□ 0.54
MBD4-201ENST00000249910 RPAP2Q8IXW5 612 aaPredicted RBP18.4■□□□□ 0.54
MBD4-201ENST00000249910 PXDNQ92626 1479 aa18.4■□□□□ 0.54
MBD4-201ENST00000249910 STRCP1A6NGW2 1772 aa18.39■□□□□ 0.53
MBD4-201ENST00000249910 CCT4P50991 539 aaKnown RBP18.39■□□□□ 0.53
MBD4-201ENST00000249910 AMOTQ4VCS5 1084 aa18.39■□□□□ 0.53
MBD4-201ENST00000249910 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
MBD4-201ENST00000249910 SLIT3O75094 1523 aa18.38■□□□□ 0.53
MBD4-201ENST00000249910 PRAMEF22A3QJZ6 481 aa18.38■□□□□ 0.53
MBD4-201ENST00000249910 CHPF2Q9P2E5 772 aa18.38■□□□□ 0.53
MBD4-201ENST00000249910 KDM4FA0A1W2PPD8 638 aa18.38■□□□□ 0.53
MBD4-201ENST00000249910 C22orf23Q9BZE7 217 aa18.38■□□□□ 0.53
MBD4-201ENST00000249910 BABAM1Q9NWV8 329 aa18.38■□□□□ 0.53
MBD4-201ENST00000249910 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
MBD4-201ENST00000249910 CSB-PGBD3P0DP91 1061 aa18.37■□□□□ 0.53
MBD4-201ENST00000249910 BMP2KLQ5H9B9 411 aa18.37■□□□□ 0.53
MBD4-201ENST00000249910 LRRC37A3O60309 1634 aa18.36■□□□□ 0.53
MBD4-201ENST00000249910 PLEKHM2Q8IWE5 1019 aa18.36■□□□□ 0.53
MBD4-201ENST00000249910 TRPM3Q9HCF6 1732 aaPredicted RBP18.36■□□□□ 0.53
MBD4-201ENST00000249910 VIRMAQ69YN4 1812 aaKnown RBP18.35■□□□□ 0.53
MBD4-201ENST00000249910 MED1Q15648 1581 aaPredicted RBP18.35■□□□□ 0.53
MBD4-201ENST00000249910 ZNF335Q9H4Z2 1342 aaPredicted RBP18.35■□□□□ 0.53
MBD4-201ENST00000249910 GNAI2P04899 355 aa18.34■□□□□ 0.53
MBD4-201ENST00000249910 GSPT1P15170 499 aaKnown RBP18.34■□□□□ 0.53
MBD4-201ENST00000249910 RAPGEF4Q8WZA2 1011 aa18.34■□□□□ 0.53
MBD4-201ENST00000249910 EXOC6BQ9Y2D4 811 aa18.34■□□□□ 0.53
MBD4-201ENST00000249910 PNMA6EA0A0J9YXQ4 647 aa18.34■□□□□ 0.53
MBD4-201ENST00000249910 BRINP3Q76B58 766 aa18.34■□□□□ 0.53
MBD4-201ENST00000249910 SLC39A6Q13433 755 aa18.33■□□□□ 0.53
MBD4-201ENST00000249910 USP44Q9H0E7 712 aa18.33■□□□□ 0.53
MBD4-201ENST00000249910 PI4KAP2A4QPH2 592 aa18.33■□□□□ 0.52
MBD4-201ENST00000249910 PI4KAP1Q8N8J0 262 aa18.33■□□□□ 0.52
MBD4-201ENST00000249910 SLKQ9H2G2 1235 aaPredicted RBP18.33■□□□□ 0.52
MBD4-201ENST00000249910 TBC1D9Q6ZT07 1266 aa18.32■□□□□ 0.52
MBD4-201ENST00000249910 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
MBD4-201ENST00000249910 PROSER3Q2NL68 480 aa18.32■□□□□ 0.52
MBD4-201ENST00000249910 RTL5Q5HYW3 569 aaPredicted RBP18.32■□□□□ 0.52
MBD4-201ENST00000249910 TBC1D2Q9BYX2 928 aa18.32■□□□□ 0.52
MBD4-201ENST00000249910 LRRFIP2Q9Y608 721 aaKnown RBP18.32■□□□□ 0.52
MBD4-201ENST00000249910 SPATA31A3Q5VYP0 1347 aa18.32■□□□□ 0.52
MBD4-201ENST00000249910 RGPD5Q99666 1765 aa18.31■□□□□ 0.52
MBD4-201ENST00000249910 GIGYF1O75420 1035 aaPredicted RBP18.3■□□□□ 0.52
MBD4-201ENST00000249910 NFATC2IPQ8NCF5 419 aa18.3■□□□□ 0.52
MBD4-201ENST00000249910 PHRF1Q9P1Y6 1649 aaKnown RBP18.3■□□□□ 0.52
MBD4-201ENST00000249910 DCCP43146 1447 aa18.3■□□□□ 0.52
MBD4-201ENST00000249910 HMMRO75330 724 aa18.3■□□□□ 0.52
MBD4-201ENST00000249910 TSHZ3Q63HK5 1081 aa18.3■□□□□ 0.52
MBD4-201ENST00000249910 NCAPD2Q15021 1401 aa18.29■□□□□ 0.52
MBD4-201ENST00000249910 GNAI3P08754 354 aa18.29■□□□□ 0.52
MBD4-201ENST00000249910 BECN1Q14457 450 aa18.29■□□□□ 0.52
MBD4-201ENST00000249910 SLAIN2Q9P270 581 aa18.29■□□□□ 0.52
MBD4-201ENST00000249910 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
MBD4-201ENST00000249910 KIF1AQ12756 1690 aa18.29■□□□□ 0.52
MBD4-201ENST00000249910 NBPF7P0C2Y1 421 aaPredicted RBP18.29■□□□□ 0.52
MBD4-201ENST00000249910 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
MBD4-201ENST00000249910 UBTFL1P0CB47 393 aaPredicted RBP18.28■□□□□ 0.52
MBD4-201ENST00000249910 TATP17735 454 aaPredicted RBP18.28■□□□□ 0.52
MBD4-201ENST00000249910 SRCIN1Q9C0H9 1055 aa18.28■□□□□ 0.52
MBD4-201ENST00000249910 ALS2Q96Q42 1657 aa18.28■□□□□ 0.52
MBD4-201ENST00000249910 NFKBIBQ15653 356 aa18.27■□□□□ 0.52
MBD4-201ENST00000249910 TTC22Q5TAA0 569 aa18.27■□□□□ 0.51
MBD4-201ENST00000249910 NCOA3Q9Y6Q9 1424 aa18.27■□□□□ 0.51
MBD4-201ENST00000249910 HOXB7P09629 217 aa18.26■□□□□ 0.51
MBD4-201ENST00000249910 PHKG2P15735 406 aa18.26■□□□□ 0.51
MBD4-201ENST00000249910 DNAAF4Q8WXU2 420 aa18.26■□□□□ 0.51
MBD4-201ENST00000249910 DBF4Q9UBU7 674 aaPredicted RBP18.26■□□□□ 0.51
MBD4-201ENST00000249910 MEGF6O75095 1541 aa18.26■□□□□ 0.51
MBD4-201ENST00000249910 CYP27B1O15528 508 aa18.26■□□□□ 0.51
MBD4-201ENST00000249910 ATP8B2P98198 1209 aa18.26■□□□□ 0.51
MBD4-201ENST00000249910 AIMP1Q12904 312 aaKnown RBP18.26■□□□□ 0.51
MBD4-201ENST00000249910 FAM208AQ9UK61 1670 aaKnown RBP18.25■□□□□ 0.51
MBD4-201ENST00000249910 LMTK3Q96Q04 1460 aa18.25■□□□□ 0.51
MBD4-201ENST00000249910 BEND3Q5T5X7 828 aa18.25■□□□□ 0.51
MBD4-201ENST00000249910 ZNF790Q6PG37 636 aa18.25■□□□□ 0.51
MBD4-201ENST00000249910 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.25■□□□□ 0.51
MBD4-201ENST00000249910 PRDM11Q9NQV5 511 aa18.25■□□□□ 0.51
MBD4-201ENST00000249910 SDSP20132 328 aa18.24■□□□□ 0.51
MBD4-201ENST00000249910 PIP4K2AP48426 406 aaPredicted RBP18.24■□□□□ 0.51
MBD4-201ENST00000249910 SLC52A2Q9HAB3 445 aa18.24■□□□□ 0.51
MBD4-201ENST00000249910 SPG7Q9UQ90 795 aa18.24■□□□□ 0.51
MBD4-201ENST00000249910 MAP3K2Q9Y2U5 619 aa18.24■□□□□ 0.51
MBD4-201ENST00000249910 CDC45O75419 566 aa18.23■□□□□ 0.51
MBD4-201ENST00000249910 ADCY9O60503 1353 aa18.23■□□□□ 0.51
MBD4-201ENST00000249910 FRAT2O75474 233 aaPredicted RBP18.23■□□□□ 0.51
MBD4-201ENST00000249910 CWF19L2Q2TBE0 894 aaKnown RBP18.23■□□□□ 0.51
MBD4-201ENST00000249910 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
MBD4-201ENST00000249910 IFNL2Q8IZJ0 200 aa18.23■□□□□ 0.51
MBD4-201ENST00000249910 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
MBD4-201ENST00000249910 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
MBD4-201ENST00000249910 RBM25P49756 843 aaKnown RBP18.22■□□□□ 0.51
MBD4-201ENST00000249910 IL1RAPL2Q9NP60 686 aa18.22■□□□□ 0.51
MBD4-201ENST00000249910 MYL6BP14649 208 aa18.22■□□□□ 0.51
MBD4-201ENST00000249910 PDE1AP54750 535 aa18.22■□□□□ 0.51
MBD4-201ENST00000249910 ZNF496Q96IT1 587 aaPredicted RBP18.22■□□□□ 0.51
MBD4-201ENST00000249910 RBM42Q9BTD8 480 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms