RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
PEX1-201ENST00000248633 KLHL40Q2TBA0 621 aa16.1■□□□□ 0.17
PEX1-201ENST00000248633 MAP7D2Q96T17 732 aa16.1■□□□□ 0.17
PEX1-201ENST00000248633 ZHX1Q9UKY1 873 aaPredicted RBP16.1■□□□□ 0.17
PEX1-201ENST00000248633 FOSBP53539 338 aa16.1■□□□□ 0.17
PEX1-201ENST00000248633 ZNF830Q96NB3 372 aaPredicted RBP16.1■□□□□ 0.17
PEX1-201ENST00000248633 FLT4P35916 1363 aa16.1■□□□□ 0.17
PEX1-201ENST00000248633 ANTXR1Q9H6X2 564 aa16.1■□□□□ 0.17
PEX1-201ENST00000248633 NPHP4O75161 1426 aaPredicted RBP16.1■□□□□ 0.17
PEX1-201ENST00000248633 HSP90B1P14625 803 aaKnown RBP16.1■□□□□ 0.17
PEX1-201ENST00000248633 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
PEX1-201ENST00000248633 PRIM1P49642 420 aaKnown RBP16.1■□□□□ 0.17
PEX1-201ENST00000248633 TTC5Q8N0Z6 440 aa16.1■□□□□ 0.17
PEX1-201ENST00000248633 RAB3GAP1Q15042 981 aa16.09■□□□□ 0.17
PEX1-201ENST00000248633 ZGPATQ8N5A5 531 aaKnown RBP16.09■□□□□ 0.17
PEX1-201ENST00000248633 CWC22Q9HCG8 908 aaKnown RBP16.09■□□□□ 0.17
PEX1-201ENST00000248633 ZNF521Q96K83 1311 aa16.09■□□□□ 0.17
PEX1-201ENST00000248633 DIAPH3Q9NSV4 1193 aa16.08■□□□□ 0.17
PEX1-201ENST00000248633 IL16Q14005 1332 aa16.08■□□□□ 0.17
PEX1-201ENST00000248633 TOM1L2Q6ZVM7 507 aa16.08■□□□□ 0.16
PEX1-201ENST00000248633 MBIPQ9NS73 344 aa16.08■□□□□ 0.16
PEX1-201ENST00000248633 IL1RAPL2Q9NP60 686 aa16.08■□□□□ 0.16
PEX1-201ENST00000248633 EYA1Q99502 592 aa16.08■□□□□ 0.16
PEX1-201ENST00000248633 USP25Q9UHP3 1055 aa16.08■□□□□ 0.16
PEX1-201ENST00000248633 CBX1P83916 185 aa16.07■□□□□ 0.16
PEX1-201ENST00000248633 REREQ9P2R6 1566 aa16.07■□□□□ 0.16
PEX1-201ENST00000248633 SMC5Q8IY18 1101 aa16.07■□□□□ 0.16
PEX1-201ENST00000248633 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
PEX1-201ENST00000248633 CHAMP1Q96JM3 812 aa16.07■□□□□ 0.16
PEX1-201ENST00000248633 ATP6V1DQ9Y5K8 247 aa16.07■□□□□ 0.16
PEX1-201ENST00000248633 GCP02774 474 aa16.06■□□□□ 0.16
PEX1-201ENST00000248633 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
PEX1-201ENST00000248633 CHRNA2Q15822 529 aa16.06■□□□□ 0.16
PEX1-201ENST00000248633 ZBTB40Q9NUA8 1239 aa16.06■□□□□ 0.16
PEX1-201ENST00000248633 HOXC9P31274 260 aa16.06■□□□□ 0.16
PEX1-201ENST00000248633 TSPYL6Q8N831 410 aa16.06■□□□□ 0.16
PEX1-201ENST00000248633 CABLES1Q8TDN4 633 aa16.06■□□□□ 0.16
PEX1-201ENST00000248633 NPHP3Q7Z494 1330 aa16.06■□□□□ 0.16
PEX1-201ENST00000248633 F6X3S4 739 aa16.05■□□□□ 0.16
PEX1-201ENST00000248633 ANKRD24Q8TF21 1146 aa16.05■□□□□ 0.16
PEX1-201ENST00000248633 FAM177BA6PVY3 158 aa16.05■□□□□ 0.16
PEX1-201ENST00000248633 ADAMTS13Q76LX8 1427 aa16.05■□□□□ 0.16
PEX1-201ENST00000248633 BICD2Q8TD16 824 aa16.05■□□□□ 0.16
PEX1-201ENST00000248633 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
PEX1-201ENST00000248633 TRIM35Q9UPQ4 493 aa16.05■□□□□ 0.16
PEX1-201ENST00000248633 NPHP1O15259 732 aa16.05■□□□□ 0.16
PEX1-201ENST00000248633 HDGFL1Q5TGJ6 251 aa16.05■□□□□ 0.16
PEX1-201ENST00000248633 PIK3R4Q99570 1358 aa16.04■□□□□ 0.16
PEX1-201ENST00000248633 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
PEX1-201ENST00000248633 DDX17Q92841 729 aaKnown RBP16.04■□□□□ 0.16
PEX1-201ENST00000248633 SNX21Q969T3 373 aa16.04■□□□□ 0.16
PEX1-201ENST00000248633 LRRC59Q96AG4 307 aaKnown RBP16.04■□□□□ 0.16
PEX1-201ENST00000248633 MTHFSDQ2M296 383 aaKnown RBP16.04■□□□□ 0.16
PEX1-201ENST00000248633 USP6P35125 1406 aa16.04■□□□□ 0.16
PEX1-201ENST00000248633 ALDH1L2Q3SY69 923 aa16.03■□□□□ 0.16
PEX1-201ENST00000248633 TRMT2AQ8IZ69 625 aaKnown RBP16.03■□□□□ 0.16
PEX1-201ENST00000248633 NRDCO43847 1150 aa16.03■□□□□ 0.16
PEX1-201ENST00000248633 MPRIPQ6WCQ1 1025 aa16.03■□□□□ 0.16
PEX1-201ENST00000248633 DTNBO60941 627 aa16.03■□□□□ 0.16
PEX1-201ENST00000248633 CD2BP2O95400 341 aaKnown RBP16.03■□□□□ 0.16
PEX1-201ENST00000248633 SPG7Q9UQ90 795 aa16.03■□□□□ 0.16
PEX1-201ENST00000248633 SBNO1A3KN83 1393 aa16.02■□□□□ 0.16
PEX1-201ENST00000248633 GOLGA6L19H0YKK7 550 aa16.02■□□□□ 0.16
PEX1-201ENST00000248633 RBSNQ9H1K0 784 aa16.02■□□□□ 0.16
PEX1-201ENST00000248633 FSD2A1L4K1 749 aa16.02■□□□□ 0.16
PEX1-201ENST00000248633 BECN2A8MW95 431 aa16.02■□□□□ 0.16
PEX1-201ENST00000248633 BTBD11A6QL63 1104 aa16.02■□□□□ 0.15
PEX1-201ENST00000248633 TAF7Q15545 349 aaPredicted RBP16.02■□□□□ 0.15
PEX1-201ENST00000248633 MTERF4Q7Z6M4 381 aaKnown RBP16.02■□□□□ 0.15
PEX1-201ENST00000248633 OTUD7AQ8TE49 926 aaPredicted RBP16.02■□□□□ 0.15
PEX1-201ENST00000248633 H3BQV1 296 aa16.01■□□□□ 0.15
PEX1-201ENST00000248633 SDSP20132 328 aa16.01■□□□□ 0.15
PEX1-201ENST00000248633 AIMP1Q12904 312 aaKnown RBP16.01■□□□□ 0.15
PEX1-201ENST00000248633 IFFO2Q5TF58 517 aa16.01■□□□□ 0.15
PEX1-201ENST00000248633 SYTL4Q96C24 671 aaPredicted RBP16.01■□□□□ 0.15
PEX1-201ENST00000248633 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
PEX1-201ENST00000248633 TRIM5Q9C035 493 aa16.01■□□□□ 0.15
PEX1-201ENST00000248633 AMOTQ4VCS5 1084 aa16.01■□□□□ 0.15
PEX1-201ENST00000248633 FERMT3Q86UX7 667 aa16.01■□□□□ 0.15
PEX1-201ENST00000248633 IP6K1Q92551 441 aa16.01■□□□□ 0.15
PEX1-201ENST00000248633 ERBB4Q15303 1308 aa16■□□□□ 0.15
PEX1-201ENST00000248633 DLC1Q96QB1 1528 aa16■□□□□ 0.15
PEX1-201ENST00000248633 KIF13AQ9H1H9 1805 aa16■□□□□ 0.15
PEX1-201ENST00000248633 PLEKHF1Q96S99 279 aa16■□□□□ 0.15
PEX1-201ENST00000248633 PKP1Q13835 747 aa16■□□□□ 0.15
PEX1-201ENST00000248633 KRT24Q2M2I5 525 aa16■□□□□ 0.15
PEX1-201ENST00000248633 SASS6Q6UVJ0 657 aa16■□□□□ 0.15
PEX1-201ENST00000248633 C8orf58Q8NAV2 365 aa16■□□□□ 0.15
PEX1-201ENST00000248633 TMEM94Q12767 1356 aa16■□□□□ 0.15
PEX1-201ENST00000248633 AATKQ6ZMQ8 1374 aa16■□□□□ 0.15
PEX1-201ENST00000248633 CEBPZQ03701 1054 aaKnown RBP16■□□□□ 0.15
PEX1-201ENST00000248633 NUTM1Q86Y26 1132 aa16■□□□□ 0.15
PEX1-201ENST00000248633 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
PEX1-201ENST00000248633 OFD1O75665 1012 aa15.99■□□□□ 0.15
PEX1-201ENST00000248633 UBTFL1P0CB47 393 aaPredicted RBP15.99■□□□□ 0.15
PEX1-201ENST00000248633 TTC22Q5TAA0 569 aa15.99■□□□□ 0.15
PEX1-201ENST00000248633 ZKSCAN1P17029 563 aaPredicted RBP15.99■□□□□ 0.15
PEX1-201ENST00000248633 RBM25P49756 843 aaKnown RBP15.99■□□□□ 0.15
PEX1-201ENST00000248633 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
PEX1-201ENST00000248633 GPATCH3Q96I76 525 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms