RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 ZNF830Q96NB3 372 aaPredicted RBP11.04□□□□□ -0.64
COL21A1-201ENST00000244728 LARP6Q9BRS8 491 aaKnown RBP11.04□□□□□ -0.64
COL21A1-201ENST00000244728 RBSNQ9H1K0 784 aa11.04□□□□□ -0.64
COL21A1-201ENST00000244728 CNNM1Q9NRU3 951 aa11.04□□□□□ -0.64
COL21A1-201ENST00000244728 LRRFIP2Q9Y608 721 aaKnown RBP11.04□□□□□ -0.64
COL21A1-201ENST00000244728 TPM4P67936 248 aa11.03□□□□□ -0.64
COL21A1-201ENST00000244728 TPD52L1Q16890 204 aaPredicted RBP11.03□□□□□ -0.64
COL21A1-201ENST00000244728 RRP12Q5JTH9 1297 aaKnown RBP11.03□□□□□ -0.64
COL21A1-201ENST00000244728 TSPYL6Q8N831 410 aa11.03□□□□□ -0.64
COL21A1-201ENST00000244728 C8orf58Q8NAV2 365 aa11.03□□□□□ -0.64
COL21A1-201ENST00000244728 NSD2O96028 1365 aa11.03□□□□□ -0.64
COL21A1-201ENST00000244728 CCDC192P0DO97 292 aa11.03□□□□□ -0.64
COL21A1-201ENST00000244728 PDCL2Q8N4E4 241 aa11.03□□□□□ -0.64
COL21A1-201ENST00000244728 KCNH5Q8NCM2 988 aa11.03□□□□□ -0.64
COL21A1-201ENST00000244728 TMX3Q96JJ7 454 aa11.03□□□□□ -0.64
COL21A1-201ENST00000244728 TRIM29Q14134 588 aa11.02□□□□□ -0.64
COL21A1-201ENST00000244728 FLIIQ13045 1269 aa11.02□□□□□ -0.65
COL21A1-201ENST00000244728 WDR7Q9Y4E6 1490 aa11.02□□□□□ -0.65
COL21A1-201ENST00000244728 ADAMTS2O95450 1211 aa11.02□□□□□ -0.65
COL21A1-201ENST00000244728 MRPL50Q8N5N7 158 aaKnown RBP11.02□□□□□ -0.65
COL21A1-201ENST00000244728 ARHGAP45Q92619 1136 aa11.02□□□□□ -0.65
COL21A1-201ENST00000244728 CCDC8Q9H0W5 538 aaPredicted RBP11.02□□□□□ -0.65
COL21A1-201ENST00000244728 MX1P20591 662 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 TNNT3P45378 269 aaPredicted RBP11.01□□□□□ -0.65
COL21A1-201ENST00000244728 CCDC34Q96HJ3 373 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 BOLA2Q9H3K6 86 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 ADCY5O95622 1261 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 HS1BP3Q53T59 392 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 CCDC183Q5T5S1 534 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 KIF6Q6ZMV9 814 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 BICDL1Q6ZP65 573 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 PI4KAP2A4QPH2 592 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 PIP4K2AP48426 406 aaPredicted RBP11.01□□□□□ -0.65
COL21A1-201ENST00000244728 KRT28Q7Z3Y7 464 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 PLEKHM2Q8IWE5 1019 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 PI4KAP1Q8N8J0 262 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 TTC21BQ7Z4L5 1316 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 ANKRD36BQ8N2N9 1353 aa11.01□□□□□ -0.65
COL21A1-201ENST00000244728 ZBTB7BO15156 539 aaPredicted RBP11□□□□□ -0.65
COL21A1-201ENST00000244728 HCLS1P14317 486 aaPredicted RBP11□□□□□ -0.65
COL21A1-201ENST00000244728 CABLES1Q8TDN4 633 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 MEIS3Q99687 375 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 ATP5J2-PTCD1G3V325 749 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 VAMP4O75379 141 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 CCDC57Q2TAC2 916 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 NOL7Q9UMY1 257 aaKnown RBP11□□□□□ -0.65
COL21A1-201ENST00000244728 ABCC2Q92887 1545 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 PDE4CQ08493 712 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 NCBP3Q53F19 620 aaKnown RBP11□□□□□ -0.65
COL21A1-201ENST00000244728 MYD88Q99836 296 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 TRIM35Q9UPQ4 493 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 FERMT3Q86UX7 667 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 HOMER1Q86YM7 354 aa11□□□□□ -0.65
COL21A1-201ENST00000244728 PBRM1Q86U86 1689 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 KRT85P78386 507 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 LRRC59Q96AG4 307 aaKnown RBP10.99□□□□□ -0.65
COL21A1-201ENST00000244728 FMNL2Q96PY5 1086 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 TNMDQ9H2S6 317 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 TTC12Q9H892 705 aaPredicted RBP10.99□□□□□ -0.65
COL21A1-201ENST00000244728 ZMYM3Q14202 1370 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 SLC39A6Q13433 755 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 EIF4A2Q14240 407 aaKnown RBP10.99□□□□□ -0.65
COL21A1-201ENST00000244728 LARP1BQ659C4 914 aaKnown RBP10.99□□□□□ -0.65
COL21A1-201ENST00000244728 ERC1Q8IUD2 1116 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 CCDC112Q8NEF3 446 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 JAKMIP1Q96N16 626 aaKnown RBP10.99□□□□□ -0.65
COL21A1-201ENST00000244728 SDF4Q9BRK5 362 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 USP26Q9BXU7 913 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 CEP126Q9P2H0 1117 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 PSMA5P28066 241 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 NOL10Q9BSC4 688 aaKnown RBP10.99□□□□□ -0.65
COL21A1-201ENST00000244728 CYP46A1Q9Y6A2 500 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 KDM5DQ9BY66 1539 aa10.99□□□□□ -0.65
COL21A1-201ENST00000244728 CEP170Q5SW79 1584 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
COL21A1-201ENST00000244728 PDCP20941 246 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 ZNF445P59923 1031 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 CCDC73Q6ZRK6 1079 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 DNAAF4Q8WXU2 420 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 ZBTB3Q9H5J0 574 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 ERICH2A1L162 156 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 CAMK4Q16566 473 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 PPP4R3BQ5MIZ7 849 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 CCDC83Q8IWF9 413 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 ANKRD44Q8N8A2 993 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 OTUD7AQ8TE49 926 aaPredicted RBP10.98□□□□□ -0.65
COL21A1-201ENST00000244728 DCTPP1Q9H773 170 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 TNRQ92752 1358 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 LRRIQ1Q96JM4 1722 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 NOLC1Q14978 699 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL21A1-201ENST00000244728 NUP62CLQ9H1M0 184 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 ERBB4Q15303 1308 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 EIF4G3O43432 1585 aaKnown RBP10.98□□□□□ -0.65
COL21A1-201ENST00000244728 CCDC158Q5M9N0 1113 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 TTC39AQ5SRH9 613 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 CCAR2Q8N163 923 aaKnown RBP10.98□□□□□ -0.65
COL21A1-201ENST00000244728 LMBRD1Q9NUN5 540 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms