RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CASC1Q6TDU7 716 aa17.74■□□□□ 0.43
HIF3A-202ENST00000244303 LTV1Q96GA3 475 aaPredicted RBP17.74■□□□□ 0.43
HIF3A-202ENST00000244303 STK31Q9BXU1 1019 aa17.74■□□□□ 0.43
HIF3A-202ENST00000244303 SSFA2P28290 1259 aa17.73■□□□□ 0.43
HIF3A-202ENST00000244303 TUBGCP6Q96RT7 1819 aa17.73■□□□□ 0.43
HIF3A-202ENST00000244303 PSME1Q06323 249 aa17.73■□□□□ 0.43
HIF3A-202ENST00000244303 NWD1Q149M9 1564 aa17.73■□□□□ 0.43
HIF3A-202ENST00000244303 GNAT3A8MTJ3 354 aa17.72■□□□□ 0.43
HIF3A-202ENST00000244303 HTATSF1O43719 755 aaKnown RBP17.72■□□□□ 0.43
HIF3A-202ENST00000244303 N4BP2Q86UW6 1770 aaPredicted RBP17.72■□□□□ 0.43
HIF3A-202ENST00000244303 GNAI2P04899 355 aa17.72■□□□□ 0.43
HIF3A-202ENST00000244303 MRE11P49959 708 aa17.71■□□□□ 0.43
HIF3A-202ENST00000244303 FLIIQ13045 1269 aa17.71■□□□□ 0.43
HIF3A-202ENST00000244303 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
HIF3A-202ENST00000244303 PDE1AP54750 535 aa17.7■□□□□ 0.42
HIF3A-202ENST00000244303 FKBP5Q13451 457 aaPredicted RBP17.7■□□□□ 0.42
HIF3A-202ENST00000244303 OSBPL3Q9H4L5 887 aa17.7■□□□□ 0.42
HIF3A-202ENST00000244303 EXOC6BQ9Y2D4 811 aa17.7■□□□□ 0.42
HIF3A-202ENST00000244303 CCDC30Q5VVM6 783 aa17.7■□□□□ 0.42
HIF3A-202ENST00000244303 PTMSP20962 102 aa17.69■□□□□ 0.42
HIF3A-202ENST00000244303 SKOR2Q2VWA4 1001 aaPredicted RBP17.69■□□□□ 0.42
HIF3A-202ENST00000244303 IP6K1Q92551 441 aa17.69■□□□□ 0.42
HIF3A-202ENST00000244303 GRPEL1Q9HAV7 217 aa17.69■□□□□ 0.42
HIF3A-202ENST00000244303 LTN1O94822 1766 aa17.69■□□□□ 0.42
HIF3A-202ENST00000244303 REC8O95072 547 aa17.69■□□□□ 0.42
HIF3A-202ENST00000244303 MAP3K5Q99683 1374 aa17.68■□□□□ 0.42
HIF3A-202ENST00000244303 ERC2O15083 957 aa17.68■□□□□ 0.42
HIF3A-202ENST00000244303 IL17REQ8NFR9 667 aa17.68■□□□□ 0.42
HIF3A-202ENST00000244303 RRAGDQ9NQL2 400 aaPredicted RBP17.68■□□□□ 0.42
HIF3A-202ENST00000244303 USHBP1Q8N6Y0 703 aa17.68■□□□□ 0.42
HIF3A-202ENST00000244303 TSHZ3Q63HK5 1081 aa17.67■□□□□ 0.42
HIF3A-202ENST00000244303 CLEC17AQ6ZS10 378 aa17.67■□□□□ 0.42
HIF3A-202ENST00000244303 ORAI2Q96SN7 254 aa17.67■□□□□ 0.42
HIF3A-202ENST00000244303 ISY1Q9ULR0 285 aaKnown RBP17.67■□□□□ 0.42
HIF3A-202ENST00000244303 PNMA6EA0A0J9YXQ4 647 aa17.67■□□□□ 0.42
HIF3A-202ENST00000244303 GNAI3P08754 354 aa17.67■□□□□ 0.42
HIF3A-202ENST00000244303 KCNH5Q8NCM2 988 aa17.67■□□□□ 0.42
HIF3A-202ENST00000244303 NFAT5O94916 1531 aa17.66■□□□□ 0.42
HIF3A-202ENST00000244303 SALL3Q9BXA9 1300 aa17.66■□□□□ 0.42
HIF3A-202ENST00000244303 BAG4O95429 457 aaKnown RBP17.66■□□□□ 0.42
HIF3A-202ENST00000244303 LRRCC1Q9C099 1032 aa17.66■□□□□ 0.42
HIF3A-202ENST00000244303 ST18O60284 1047 aa17.65■□□□□ 0.42
HIF3A-202ENST00000244303 GOLGA6L22H0YM25 854 aa17.65■□□□□ 0.42
HIF3A-202ENST00000244303 ATP8B2P98198 1209 aa17.65■□□□□ 0.42
HIF3A-202ENST00000244303 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
HIF3A-202ENST00000244303 GAS2L3Q86XJ1 694 aa17.65■□□□□ 0.42
HIF3A-202ENST00000244303 ZBTB7CA1YPR0 619 aa17.64■□□□□ 0.41
HIF3A-202ENST00000244303 XPCQ01831 940 aaPredicted RBP17.64■□□□□ 0.41
HIF3A-202ENST00000244303 NBPF6Q5VWK0 638 aa17.64■□□□□ 0.41
HIF3A-202ENST00000244303 PROSER2Q86WR7 435 aaPredicted RBP17.64■□□□□ 0.41
HIF3A-202ENST00000244303 NBPF4Q96M43 638 aa17.64■□□□□ 0.41
HIF3A-202ENST00000244303 LRRFIP2Q9Y608 721 aaKnown RBP17.64■□□□□ 0.41
HIF3A-202ENST00000244303 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
HIF3A-202ENST00000244303 PXDNLA1KZ92 1463 aa17.63■□□□□ 0.41
HIF3A-202ENST00000244303 IBTKQ9P2D0 1353 aaPredicted RBP17.63■□□□□ 0.41
HIF3A-202ENST00000244303 NUCB2P80303 420 aa17.63■□□□□ 0.41
HIF3A-202ENST00000244303 CYP2E1P05181 493 aaPredicted RBP17.63■□□□□ 0.41
HIF3A-202ENST00000244303 MX1P20591 662 aa17.63■□□□□ 0.41
HIF3A-202ENST00000244303 PKP1Q13835 747 aa17.63■□□□□ 0.41
HIF3A-202ENST00000244303 BABAM1Q9NWV8 329 aa17.63■□□□□ 0.41
HIF3A-202ENST00000244303 UBE2Q2Q8WVN8 375 aa17.62■□□□□ 0.41
HIF3A-202ENST00000244303 ZGPATQ8N5A5 531 aaKnown RBP17.61■□□□□ 0.41
HIF3A-202ENST00000244303 HDGFL1Q5TGJ6 251 aa17.61■□□□□ 0.41
HIF3A-202ENST00000244303 USP44Q9H0E7 712 aa17.61■□□□□ 0.41
HIF3A-202ENST00000244303 PHAXQ9H814 394 aaKnown RBP17.61■□□□□ 0.41
HIF3A-202ENST00000244303 RGPD2P0DJD1 1756 aa17.61■□□□□ 0.41
HIF3A-202ENST00000244303 GCP02774 474 aa17.6■□□□□ 0.41
HIF3A-202ENST00000244303 KLHL40Q2TBA0 621 aa17.6■□□□□ 0.41
HIF3A-202ENST00000244303 MCTP1Q6DN14 999 aa17.6■□□□□ 0.41
HIF3A-202ENST00000244303 ESYT1Q9BSJ8 1104 aa17.6■□□□□ 0.41
HIF3A-202ENST00000244303 CWC22Q9HCG8 908 aaKnown RBP17.6■□□□□ 0.41
HIF3A-202ENST00000244303 DDX49Q9Y6V7 483 aaKnown RBP17.6■□□□□ 0.41
HIF3A-202ENST00000244303 TRIM6-TRIM34B2RNG4 842 aa17.59■□□□□ 0.41
HIF3A-202ENST00000244303 UBTFL1P0CB47 393 aaPredicted RBP17.59■□□□□ 0.41
HIF3A-202ENST00000244303 RILPL2Q969X0 211 aa17.59■□□□□ 0.41
HIF3A-202ENST00000244303 KDM3BQ7LBC6 1761 aa17.59■□□□□ 0.41
HIF3A-202ENST00000244303 PLEKHG5O94827 1062 aa17.59■□□□□ 0.41
HIF3A-202ENST00000244303 LMOD2Q6P5Q4 547 aa17.59■□□□□ 0.41
HIF3A-202ENST00000244303 ARHGEF25Q86VW2 580 aa17.59■□□□□ 0.41
HIF3A-202ENST00000244303 LRRC59Q96AG4 307 aaKnown RBP17.59■□□□□ 0.41
HIF3A-202ENST00000244303 KRT28Q7Z3Y7 464 aa17.58■□□□□ 0.4
HIF3A-202ENST00000244303 MED1Q15648 1581 aaPredicted RBP17.58■□□□□ 0.4
HIF3A-202ENST00000244303 CEMIPQ8WUJ3 1361 aa17.58■□□□□ 0.4
HIF3A-202ENST00000244303 CHMLP26374 656 aa17.58■□□□□ 0.4
HIF3A-202ENST00000244303 STAP2Q9UGK3 403 aa17.58■□□□□ 0.4
HIF3A-202ENST00000244303 PHRF1Q9P1Y6 1649 aaKnown RBP17.57■□□□□ 0.4
HIF3A-202ENST00000244303 NEK4P51957 841 aa17.57■□□□□ 0.4
HIF3A-202ENST00000244303 C19orf44Q9H6X5 657 aa17.57■□□□□ 0.4
HIF3A-202ENST00000244303 SLIT3O75094 1523 aa17.57■□□□□ 0.4
HIF3A-202ENST00000244303 SRCIN1Q9C0H9 1055 aa17.56■□□□□ 0.4
HIF3A-202ENST00000244303 EIF2S2P20042 333 aaKnown RBP17.56■□□□□ 0.4
HIF3A-202ENST00000244303 UNC5CLQ8IV45 518 aa17.56■□□□□ 0.4
HIF3A-202ENST00000244303 SSH3Q8TE77 659 aa17.56■□□□□ 0.4
HIF3A-202ENST00000244303 LGR6Q9HBX8 967 aa17.56■□□□□ 0.4
HIF3A-202ENST00000244303 IL1RAPL2Q9NP60 686 aa17.56■□□□□ 0.4
HIF3A-202ENST00000244303 PALD1Q9ULE6 856 aa17.56■□□□□ 0.4
HIF3A-202ENST00000244303 ZDHHC9Q9Y397 364 aa17.56■□□□□ 0.4
HIF3A-202ENST00000244303 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
HIF3A-202ENST00000244303 ANO2Q9NQ90 1003 aa17.55■□□□□ 0.4
HIF3A-202ENST00000244303 LMBRD1Q9NUN5 540 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms