RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 HSP90AA2PQ14568 343 aaPredicted RBP4.81□□□□□ -1.64
UFM1-201ENST00000239878 DDX17Q92841 729 aaKnown RBP4.81□□□□□ -1.64
UFM1-201ENST00000239878 COL5A2P05997 1499 aaPredicted RBP4.81□□□□□ -1.64
UFM1-201ENST00000239878 NSD3Q9BZ95 1437 aa4.81□□□□□ -1.64
UFM1-201ENST00000239878 GTF2E1P29083 439 aaPredicted RBP4.81□□□□□ -1.64
UFM1-201ENST00000239878 CCDC97Q96F63 343 aaPredicted RBP4.81□□□□□ -1.64
UFM1-201ENST00000239878 MFRPQ9BY79 579 aa4.81□□□□□ -1.64
UFM1-201ENST00000239878 CABP1Q9NZU7 370 aa4.81□□□□□ -1.64
UFM1-201ENST00000239878 RGS17Q9UGC6 210 aaPredicted RBP4.81□□□□□ -1.64
UFM1-201ENST00000239878 KTN1Q86UP2 1357 aaKnown RBP4.81□□□□□ -1.64
UFM1-201ENST00000239878 RGPD3A6NKT7 1758 aaPredicted RBP4.81□□□□□ -1.64
UFM1-201ENST00000239878 RGPD4Q7Z3J3 1758 aa4.81□□□□□ -1.64
UFM1-201ENST00000239878 PPP1R37O75864 691 aa4.81□□□□□ -1.64
UFM1-201ENST00000239878 RGS3P49796 1198 aa4.81□□□□□ -1.64
UFM1-201ENST00000239878 KRI1Q8N9T8 703 aaKnown RBP4.81□□□□□ -1.64
UFM1-201ENST00000239878 OXER1Q8TDS5 423 aa4.81□□□□□ -1.64
UFM1-201ENST00000239878 CWC22Q9HCG8 908 aaKnown RBP4.81□□□□□ -1.64
UFM1-201ENST00000239878 CICQ96RK0 1608 aaPredicted RBP4.81□□□□□ -1.64
UFM1-201ENST00000239878 SAFB2Q14151 953 aaKnown RBP eCLIP4.8□□□□□ -1.64
UFM1-201ENST00000239878 ESCO1Q5FWF5 840 aa4.8□□□□□ -1.64
UFM1-201ENST00000239878 KRT28Q7Z3Y7 464 aa4.8□□□□□ -1.64
UFM1-201ENST00000239878 KIAA1522Q9P206 1035 aaPredicted RBP4.8□□□□□ -1.64
UFM1-201ENST00000239878 PARD3Q8TEW0 1356 aa4.8□□□□□ -1.64
UFM1-201ENST00000239878 BLMP54132 1417 aaPredicted RBP4.8□□□□□ -1.64
UFM1-201ENST00000239878 CDCA8Q53HL2 280 aa4.8□□□□□ -1.64
UFM1-201ENST00000239878 LRRC59Q96AG4 307 aaKnown RBP4.8□□□□□ -1.64
UFM1-201ENST00000239878 SLC12A5Q9H2X9 1139 aa4.8□□□□□ -1.64
UFM1-201ENST00000239878 NAP1L5Q96NT1 182 aaPredicted RBP4.79□□□□□ -1.64
UFM1-201ENST00000239878 BCL9O00512 1426 aa4.79□□□□□ -1.64
UFM1-201ENST00000239878 RGPD2P0DJD1 1756 aa4.79□□□□□ -1.64
UFM1-201ENST00000239878 RRP9O43818 475 aaKnown RBP4.79□□□□□ -1.64
UFM1-201ENST00000239878 NEFMP07197 916 aa4.79□□□□□ -1.64
UFM1-201ENST00000239878 MFSD10Q14728 455 aa4.79□□□□□ -1.64
UFM1-201ENST00000239878 TNS1Q9HBL0 1735 aaKnown RBP4.79□□□□□ -1.64
UFM1-201ENST00000239878 RBM47A0AV96 593 aaKnown RBP4.79□□□□□ -1.64
UFM1-201ENST00000239878 ATMINO43313 823 aaPredicted RBP4.79□□□□□ -1.64
UFM1-201ENST00000239878 FOXO3O43524 673 aa4.79□□□□□ -1.64
UFM1-201ENST00000239878 BRD1O95696 1058 aa4.79□□□□□ -1.64
UFM1-201ENST00000239878 PSME1Q06323 249 aa4.79□□□□□ -1.64
UFM1-201ENST00000239878 CAMK2BQ13554 666 aa4.79□□□□□ -1.64
UFM1-201ENST00000239878 FAM43AQ8N2R8 423 aa4.79□□□□□ -1.64
UFM1-201ENST00000239878 BRWD3Q6RI45 1802 aa4.78□□□□□ -1.64
UFM1-201ENST00000239878 PAPPAQ13219 1627 aa4.78□□□□□ -1.64
UFM1-201ENST00000239878 FYB1O15117 783 aa4.78□□□□□ -1.64
UFM1-201ENST00000239878 SRPK2P78362 688 aaKnown RBP4.78□□□□□ -1.64
UFM1-201ENST00000239878 PIP4K2BP78356 416 aa4.78□□□□□ -1.64
UFM1-201ENST00000239878 PMFBP1Q8TBY8 1022 aa4.78□□□□□ -1.64
UFM1-201ENST00000239878 COG6Q9Y2V7 657 aa4.78□□□□□ -1.64
UFM1-201ENST00000239878 MAP2P11137 1827 aaKnown RBP4.78□□□□□ -1.64
UFM1-201ENST00000239878 TOGARAM1Q9Y4F4 1720 aa4.78□□□□□ -1.64
UFM1-201ENST00000239878 ARHGEF25Q86VW2 580 aa4.77□□□□□ -1.65
UFM1-201ENST00000239878 RGS12O14924 1447 aa4.77□□□□□ -1.65
UFM1-201ENST00000239878 ZNF831Q5JPB2 1677 aa4.77□□□□□ -1.65
UFM1-201ENST00000239878 IRX6P78412 446 aaPredicted RBP4.77□□□□□ -1.65
UFM1-201ENST00000239878 SND1Q7KZF4 910 aaKnown RBP eCLIP4.77□□□□□ -1.65
UFM1-201ENST00000239878 CERS3Q8IU89 383 aa4.77□□□□□ -1.65
UFM1-201ENST00000239878 TERF2IPQ9NYB0 399 aa4.77□□□□□ -1.65
UFM1-201ENST00000239878 NHSQ6T4R5 1651 aa4.77□□□□□ -1.65
UFM1-201ENST00000239878 KIAA0232Q92628 1395 aa4.77□□□□□ -1.65
UFM1-201ENST00000239878 PATL2C9JE40 543 aaKnown RBP4.77□□□□□ -1.65
UFM1-201ENST00000239878 NME9Q86XW9 330 aa4.77□□□□□ -1.65
UFM1-201ENST00000239878 IPO4Q8TEX9 1081 aaKnown RBP4.77□□□□□ -1.65
UFM1-201ENST00000239878 SIPA1L3O60292 1781 aaPredicted RBP4.77□□□□□ -1.65
UFM1-201ENST00000239878 RREB1Q92766 1687 aa4.76□□□□□ -1.65
UFM1-201ENST00000239878 IPO9Q96P70 1041 aaKnown RBP4.76□□□□□ -1.65
UFM1-201ENST00000239878 MRC1P22897 1456 aa4.76□□□□□ -1.65
UFM1-201ENST00000239878 SBF2Q86WG5 1849 aa4.76□□□□□ -1.65
UFM1-201ENST00000239878 CGNL1Q0VF96 1302 aa4.76□□□□□ -1.65
UFM1-201ENST00000239878 CCDC27Q2M243 656 aa4.76□□□□□ -1.65
UFM1-201ENST00000239878 LAS1LQ9Y4W2 734 aaKnown RBP4.76□□□□□ -1.65
UFM1-201ENST00000239878 KDRP35968 1356 aa4.76□□□□□ -1.65
UFM1-201ENST00000239878 FAM83GA6ND36 823 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 MS4A1P11836 297 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 XPCQ01831 940 aaPredicted RBP4.75□□□□□ -1.65
UFM1-201ENST00000239878 CCDC102AQ96A19 550 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 SPATA32Q96LK8 384 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 RRAGDQ9NQL2 400 aaPredicted RBP4.75□□□□□ -1.65
UFM1-201ENST00000239878 CRB1P82279 1406 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 NUTM2FA1L443 756 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 PPM1GO15355 546 aaPredicted RBP4.75□□□□□ -1.65
UFM1-201ENST00000239878 GCP02774 474 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 HSP90AA1P07900 732 aaKnown RBP4.75□□□□□ -1.65
UFM1-201ENST00000239878 MNX1P50219 401 aaPredicted RBP4.75□□□□□ -1.65
UFM1-201ENST00000239878 DCAF8Q5TAQ9 597 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 HDGFL2Q7Z4V5 671 aaPredicted RBP4.75□□□□□ -1.65
UFM1-201ENST00000239878 PANK3Q9H999 370 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 SPATA31A5Q5VU36 1347 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 SPATA31A7Q8IWB4 1347 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 OVOS2A0A0G2JMS6 1433 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 VPS72Q15906 364 aa4.75□□□□□ -1.65
UFM1-201ENST00000239878 NGDNQ8NEJ9 315 aaKnown RBP4.75□□□□□ -1.65
UFM1-201ENST00000239878 ZC3H4Q9UPT8 1303 aaKnown RBP4.74□□□□□ -1.65
UFM1-201ENST00000239878 TNS2Q63HR2 1409 aa4.74□□□□□ -1.65
UFM1-201ENST00000239878 CALD1Q05682 793 aaKnown RBP4.74□□□□□ -1.65
UFM1-201ENST00000239878 TMED8Q6PL24 325 aaPredicted RBP4.74□□□□□ -1.65
UFM1-201ENST00000239878 KCNH5Q8NCM2 988 aa4.74□□□□□ -1.65
UFM1-201ENST00000239878 FBXO22Q8NEZ5 403 aa4.74□□□□□ -1.65
UFM1-201ENST00000239878 PHF12Q96QT6 1004 aa4.74□□□□□ -1.65
UFM1-201ENST00000239878 COL24A1Q17RW2 1714 aa4.74□□□□□ -1.65
UFM1-201ENST00000239878 FLT4P35916 1363 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms