RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CHMLP26374 656 aa18.85■□□□□ 0.61
DDX55-201ENST00000238146 TXNDC2Q86VQ3 553 aa18.85■□□□□ 0.61
DDX55-201ENST00000238146 ANO2Q9NQ90 1003 aa18.84■□□□□ 0.61
DDX55-201ENST00000238146 NRKQ7Z2Y5 1582 aa18.84■□□□□ 0.61
DDX55-201ENST00000238146 MON2Q7Z3U7 1717 aa18.84■□□□□ 0.61
DDX55-201ENST00000238146 DYNC1I1O14576 645 aa18.84■□□□□ 0.61
DDX55-201ENST00000238146 GNAI2P04899 355 aa18.84■□□□□ 0.61
DDX55-201ENST00000238146 SYAP1Q96A49 352 aaPredicted RBP18.84■□□□□ 0.61
DDX55-201ENST00000238146 MX1P20591 662 aa18.83■□□□□ 0.61
DDX55-201ENST00000238146 SASS6Q6UVJ0 657 aa18.83■□□□□ 0.61
DDX55-201ENST00000238146 LRRCC1Q9C099 1032 aa18.83■□□□□ 0.61
DDX55-201ENST00000238146 GADD45BO75293 160 aaPredicted RBP18.83■□□□□ 0.6
DDX55-201ENST00000238146 C3P01024 1663 aa18.82■□□□□ 0.6
DDX55-201ENST00000238146 FOXD4L6Q3SYB3 417 aaPredicted RBP18.82■□□□□ 0.6
DDX55-201ENST00000238146 FOXD4L3Q6VB84 417 aaPredicted RBP18.82■□□□□ 0.6
DDX55-201ENST00000238146 GDPD2Q9HCC8 539 aa18.82■□□□□ 0.6
DDX55-201ENST00000238146 METP08581 1390 aa18.82■□□□□ 0.6
DDX55-201ENST00000238146 PTMAP06454 111 aaKnown RBP18.82■□□□□ 0.6
DDX55-201ENST00000238146 RILPL2Q969X0 211 aa18.82■□□□□ 0.6
DDX55-201ENST00000238146 IL17RAQ96F46 866 aa18.82■□□□□ 0.6
DDX55-201ENST00000238146 UPF3BQ9BZI7 483 aaKnown RBP18.82■□□□□ 0.6
DDX55-201ENST00000238146 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.81■□□□□ 0.6
DDX55-201ENST00000238146 TRIM6-TRIM34B2RNG4 842 aa18.81■□□□□ 0.6
DDX55-201ENST00000238146 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
DDX55-201ENST00000238146 PNMA6EA0A0J9YXQ4 647 aa18.8■□□□□ 0.6
DDX55-201ENST00000238146 USP48Q86UV5 1035 aa18.8■□□□□ 0.6
DDX55-201ENST00000238146 PRR36Q9H6K5 1346 aa18.8■□□□□ 0.6
DDX55-201ENST00000238146 SSH2Q76I76 1423 aa18.8■□□□□ 0.6
DDX55-201ENST00000238146 TUBGCP6Q96RT7 1819 aa18.79■□□□□ 0.6
DDX55-201ENST00000238146 KIAA2012Q0VF49 1180 aa18.79■□□□□ 0.6
DDX55-201ENST00000238146 UNC5CLQ8IV45 518 aa18.79■□□□□ 0.6
DDX55-201ENST00000238146 TSPYL4Q9UJ04 414 aa18.79■□□□□ 0.6
DDX55-201ENST00000238146 FOXO3O43524 673 aa18.79■□□□□ 0.6
DDX55-201ENST00000238146 PHF14O94880 888 aa18.79■□□□□ 0.6
DDX55-201ENST00000238146 STAP2Q9UGK3 403 aa18.79■□□□□ 0.6
DDX55-201ENST00000238146 ATP8B2P98198 1209 aa18.78■□□□□ 0.6
DDX55-201ENST00000238146 MTERF4Q7Z6M4 381 aaKnown RBP18.78■□□□□ 0.6
DDX55-201ENST00000238146 WDR33Q9C0J8 1336 aaKnown RBP18.78■□□□□ 0.6
DDX55-201ENST00000238146 AKAP12Q02952 1782 aa18.78■□□□□ 0.6
DDX55-201ENST00000238146 IL25Q9H293 177 aa18.77■□□□□ 0.6
DDX55-201ENST00000238146 TTC21BQ7Z4L5 1316 aa18.77■□□□□ 0.6
DDX55-201ENST00000238146 GNAI3P08754 354 aa18.77■□□□□ 0.59
DDX55-201ENST00000238146 MTHFSDQ2M296 383 aaKnown RBP18.76■□□□□ 0.59
DDX55-201ENST00000238146 UVSSAQ2YD98 709 aa18.76■□□□□ 0.59
DDX55-201ENST00000238146 FAM184AQ8NB25 1140 aa18.76■□□□□ 0.59
DDX55-201ENST00000238146 SRCIN1Q9C0H9 1055 aa18.76■□□□□ 0.59
DDX55-201ENST00000238146 NRXN3Q9Y4C0 1643 aa18.75■□□□□ 0.59
DDX55-201ENST00000238146 MPNDQ8N594 471 aa18.75■□□□□ 0.59
DDX55-201ENST00000238146 PLEKHG5O94827 1062 aa18.75■□□□□ 0.59
DDX55-201ENST00000238146 HSPA4P34932 840 aa18.75■□□□□ 0.59
DDX55-201ENST00000238146 TMEM87AQ8NBN3 555 aa18.75■□□□□ 0.59
DDX55-201ENST00000238146 RTF1Q92541 710 aaKnown RBP18.75■□□□□ 0.59
DDX55-201ENST00000238146 STK31Q9BXU1 1019 aa18.75■□□□□ 0.59
DDX55-201ENST00000238146 ITSN1Q15811 1721 aa18.75■□□□□ 0.59
DDX55-201ENST00000238146 MAP3K19Q56UN5 1328 aa18.75■□□□□ 0.59
DDX55-201ENST00000238146 FLIIQ13045 1269 aa18.74■□□□□ 0.59
DDX55-201ENST00000238146 SIRT1Q96EB6 747 aa18.74■□□□□ 0.59
DDX55-201ENST00000238146 USP25Q9UHP3 1055 aa18.74■□□□□ 0.59
DDX55-201ENST00000238146 ARHGEF10O15013 1369 aa18.74■□□□□ 0.59
DDX55-201ENST00000238146 OVOS2A0A0J9YW53 1432 aa18.74■□□□□ 0.59
DDX55-201ENST00000238146 OVOS2Q6IE36 1432 aa18.74■□□□□ 0.59
DDX55-201ENST00000238146 ZNF830Q96NB3 372 aaPredicted RBP18.74■□□□□ 0.59
DDX55-201ENST00000238146 RPAP1Q9BWH6 1393 aaPredicted RBP18.74■□□□□ 0.59
DDX55-201ENST00000238146 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
DDX55-201ENST00000238146 EPB41L2O43491 1005 aaKnown RBP18.73■□□□□ 0.59
DDX55-201ENST00000238146 FKBP5Q13451 457 aaPredicted RBP18.73■□□□□ 0.59
DDX55-201ENST00000238146 PEAK1Q9H792 1746 aa18.73■□□□□ 0.59
DDX55-201ENST00000238146 CCDC183Q5T5S1 534 aa18.73■□□□□ 0.59
DDX55-201ENST00000238146 MYRIPQ8NFW9 859 aa18.73■□□□□ 0.59
DDX55-201ENST00000238146 PIBF1Q8WXW3 757 aa18.73■□□□□ 0.59
DDX55-201ENST00000238146 LRRFIP2Q9Y608 721 aaKnown RBP18.73■□□□□ 0.59
DDX55-201ENST00000238146 CNPY2Q9Y2B0 182 aa18.72■□□□□ 0.59
DDX55-201ENST00000238146 ZBTB7CA1YPR0 619 aa18.72■□□□□ 0.59
DDX55-201ENST00000238146 TCHHQ07283 1943 aa18.72■□□□□ 0.59
DDX55-201ENST00000238146 DNTTIP2Q5QJE6 756 aaKnown RBP18.72■□□□□ 0.59
DDX55-201ENST00000238146 TECPR2O15040 1411 aa18.71■□□□□ 0.59
DDX55-201ENST00000238146 ACEP12821 1306 aa18.71■□□□□ 0.59
DDX55-201ENST00000238146 AOX1Q06278 1338 aa18.71■□□□□ 0.59
DDX55-201ENST00000238146 SOX12O15370 315 aa18.71■□□□□ 0.59
DDX55-201ENST00000238146 ARID3AQ99856 593 aa18.71■□□□□ 0.59
DDX55-201ENST00000238146 IL1RAPL2Q9NP60 686 aa18.71■□□□□ 0.59
DDX55-201ENST00000238146 SPATA31D1Q6ZQQ2 1576 aa18.71■□□□□ 0.59
DDX55-201ENST00000238146 ADCY5O95622 1261 aa18.71■□□□□ 0.59
DDX55-201ENST00000238146 PRDM4Q9UKN5 801 aa18.71■□□□□ 0.59
DDX55-201ENST00000238146 NOLC1Q14978 699 aaKnown RBP eCLIP18.7■□□□□ 0.58
DDX55-201ENST00000238146 OSCARQ8IYS5 282 aa18.7■□□□□ 0.58
DDX55-201ENST00000238146 HCLS1P14317 486 aaPredicted RBP18.7■□□□□ 0.58
DDX55-201ENST00000238146 TTC12Q9H892 705 aaPredicted RBP18.7■□□□□ 0.58
DDX55-201ENST00000238146 ZSCAN22P10073 491 aaPredicted RBP18.69■□□□□ 0.58
DDX55-201ENST00000238146 CCDC30Q5VVM6 783 aa18.69■□□□□ 0.58
DDX55-201ENST00000238146 NECTIN2Q92692 538 aa18.69■□□□□ 0.58
DDX55-201ENST00000238146 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
DDX55-201ENST00000238146 NUTM1Q86Y26 1132 aa18.69■□□□□ 0.58
DDX55-201ENST00000238146 JARID2Q92833 1246 aaPredicted RBP18.69■□□□□ 0.58
DDX55-201ENST00000238146 TTC14Q96N46 770 aa18.69■□□□□ 0.58
DDX55-201ENST00000238146 USP44Q9H0E7 712 aa18.69■□□□□ 0.58
DDX55-201ENST00000238146 USP31Q70CQ4 1352 aa18.69■□□□□ 0.58
DDX55-201ENST00000238146 PRIMPOLQ96LW4 560 aa18.68■□□□□ 0.58
DDX55-201ENST00000238146 SNX14Q9Y5W7 946 aa18.68■□□□□ 0.58
DDX55-201ENST00000238146 RAD50Q92878 1312 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms