RNA–Protein interactions for RNA: ENST00000234310.7

PPP3R1-201, Transcript of protein phosphatase 3 regulatory subunit B, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP3R1, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3R1-201ENST00000234310 HDGFL1Q5TGJ6 251 aa17.45■□□□□ 0.38
PPP3R1-201ENST00000234310 AXIN2Q9Y2T1 843 aa17.45■□□□□ 0.38
PPP3R1-201ENST00000234310 LRRFIP2Q9Y608 721 aaKnown RBP17.45■□□□□ 0.38
PPP3R1-201ENST00000234310 CCT4P50991 539 aaKnown RBP17.45■□□□□ 0.38
PPP3R1-201ENST00000234310 GZF1Q9H116 711 aaPredicted RBP17.44■□□□□ 0.38
PPP3R1-201ENST00000234310 HTATSF1O43719 755 aaKnown RBP17.44■□□□□ 0.38
PPP3R1-201ENST00000234310 PXDNQ92626 1479 aa17.43■□□□□ 0.38
PPP3R1-201ENST00000234310 PRAMEF22A3QJZ6 481 aa17.43■□□□□ 0.38
PPP3R1-201ENST00000234310 GCP02774 474 aa17.43■□□□□ 0.38
PPP3R1-201ENST00000234310 GNAI2P04899 355 aa17.43■□□□□ 0.38
PPP3R1-201ENST00000234310 HSP90AB1P08238 724 aaKnown RBP17.43■□□□□ 0.38
PPP3R1-201ENST00000234310 USP54Q70EL1 1684 aa17.43■□□□□ 0.38
PPP3R1-201ENST00000234310 ZNF530Q6P9A1 599 aaPredicted RBP17.42■□□□□ 0.38
PPP3R1-201ENST00000234310 CHPF2Q9P2E5 772 aa17.42■□□□□ 0.38
PPP3R1-201ENST00000234310 NPHP4O75161 1426 aaPredicted RBP17.42■□□□□ 0.38
PPP3R1-201ENST00000234310 USP44Q9H0E7 712 aa17.42■□□□□ 0.38
PPP3R1-201ENST00000234310 CHMP5Q9NZZ3 219 aa17.42■□□□□ 0.38
PPP3R1-201ENST00000234310 ZC3H6P61129 1189 aaKnown RBP17.41■□□□□ 0.38
PPP3R1-201ENST00000234310 ZNF142P52746 1687 aaPredicted RBP17.41■□□□□ 0.38
PPP3R1-201ENST00000234310 MCM4P33991 863 aa17.4■□□□□ 0.38
PPP3R1-201ENST00000234310 EIF4A1P60842 406 aaKnown RBP17.4■□□□□ 0.38
PPP3R1-201ENST00000234310 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
PPP3R1-201ENST00000234310 DDIT3P35638 169 aa17.39■□□□□ 0.38
PPP3R1-201ENST00000234310 PDE1AP54750 535 aa17.39■□□□□ 0.38
PPP3R1-201ENST00000234310 SNX21Q969T3 373 aa17.39■□□□□ 0.38
PPP3R1-201ENST00000234310 IL1RAPL2Q9NP60 686 aa17.39■□□□□ 0.38
PPP3R1-201ENST00000234310 NCOA3Q9Y6Q9 1424 aa17.39■□□□□ 0.37
PPP3R1-201ENST00000234310 ADAMTSL3P82987 1691 aa17.39■□□□□ 0.37
PPP3R1-201ENST00000234310 PROSER2Q86WR7 435 aaPredicted RBP17.39■□□□□ 0.37
PPP3R1-201ENST00000234310 ANKRD24Q8TF21 1146 aa17.39■□□□□ 0.37
PPP3R1-201ENST00000234310 ARHGEF25Q86VW2 580 aa17.39■□□□□ 0.37
PPP3R1-201ENST00000234310 USP26Q9BXU7 913 aa17.39■□□□□ 0.37
PPP3R1-201ENST00000234310 HMMRO75330 724 aa17.38■□□□□ 0.37
PPP3R1-201ENST00000234310 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
PPP3R1-201ENST00000234310 PROSER3Q2NL68 480 aa17.38■□□□□ 0.37
PPP3R1-201ENST00000234310 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
PPP3R1-201ENST00000234310 AK9Q5TCS8 1911 aa17.38■□□□□ 0.37
PPP3R1-201ENST00000234310 KRT28Q7Z3Y7 464 aa17.37■□□□□ 0.37
PPP3R1-201ENST00000234310 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
PPP3R1-201ENST00000234310 PI4KAP2A4QPH2 592 aa17.37■□□□□ 0.37
PPP3R1-201ENST00000234310 HSP90AA1P07900 732 aaKnown RBP17.37■□□□□ 0.37
PPP3R1-201ENST00000234310 TEFQ10587 303 aa17.37■□□□□ 0.37
PPP3R1-201ENST00000234310 PI4KAP1Q8N8J0 262 aa17.37■□□□□ 0.37
PPP3R1-201ENST00000234310 KCNH5Q8NCM2 988 aa17.37■□□□□ 0.37
PPP3R1-201ENST00000234310 RGPD5Q99666 1765 aa17.36■□□□□ 0.37
PPP3R1-201ENST00000234310 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
PPP3R1-201ENST00000234310 CABLES1Q8TDN4 633 aa17.36■□□□□ 0.37
PPP3R1-201ENST00000234310 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
PPP3R1-201ENST00000234310 K7ELQ4 463 aaPredicted RBP17.36■□□□□ 0.37
PPP3R1-201ENST00000234310 MAP4K4O95819 1239 aaPredicted RBP17.36■□□□□ 0.37
PPP3R1-201ENST00000234310 UBTFL1P0CB47 393 aaPredicted RBP17.35■□□□□ 0.37
PPP3R1-201ENST00000234310 NUTM1Q86Y26 1132 aa17.35■□□□□ 0.37
PPP3R1-201ENST00000234310 GNAI3P08754 354 aa17.35■□□□□ 0.37
PPP3R1-201ENST00000234310 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
PPP3R1-201ENST00000234310 SALL3Q9BXA9 1300 aa17.34■□□□□ 0.37
PPP3R1-201ENST00000234310 RNMTO43148 476 aaKnown RBP17.34■□□□□ 0.37
PPP3R1-201ENST00000234310 PPP1R42Q7Z4L9 355 aa17.34■□□□□ 0.37
PPP3R1-201ENST00000234310 RILPL2Q969X0 211 aa17.34■□□□□ 0.37
PPP3R1-201ENST00000234310 AKAP4Q5JQC9 854 aa17.33■□□□□ 0.37
PPP3R1-201ENST00000234310 IL25Q9H293 177 aa17.33■□□□□ 0.37
PPP3R1-201ENST00000234310 MED1Q15648 1581 aaPredicted RBP17.33■□□□□ 0.36
PPP3R1-201ENST00000234310 IBTKQ9P2D0 1353 aaPredicted RBP17.33■□□□□ 0.36
PPP3R1-201ENST00000234310 SSFA2P28290 1259 aa17.33■□□□□ 0.36
PPP3R1-201ENST00000234310 MX1P20591 662 aa17.32■□□□□ 0.36
PPP3R1-201ENST00000234310 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
PPP3R1-201ENST00000234310 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
PPP3R1-201ENST00000234310 KDM3BQ7LBC6 1761 aa17.32■□□□□ 0.36
PPP3R1-201ENST00000234310 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
PPP3R1-201ENST00000234310 SRCIN1Q9C0H9 1055 aa17.32■□□□□ 0.36
PPP3R1-201ENST00000234310 TRAK2O60296 914 aa17.31■□□□□ 0.36
PPP3R1-201ENST00000234310 PKP1Q13835 747 aa17.31■□□□□ 0.36
PPP3R1-201ENST00000234310 SOS1Q07889 1333 aaPredicted RBP17.31■□□□□ 0.36
PPP3R1-201ENST00000234310 ADCY9O60503 1353 aa17.31■□□□□ 0.36
PPP3R1-201ENST00000234310 C1orf141Q5JVX7 400 aa17.31■□□□□ 0.36
PPP3R1-201ENST00000234310 SURF6O75683 361 aaKnown RBP17.31■□□□□ 0.36
PPP3R1-201ENST00000234310 BEND3Q5T5X7 828 aa17.31■□□□□ 0.36
PPP3R1-201ENST00000234310 C1orf167Q5SNV9 1468 aa17.3■□□□□ 0.36
PPP3R1-201ENST00000234310 SRGAP3O43295 1099 aa17.3■□□□□ 0.36
PPP3R1-201ENST00000234310 CHRNA2Q15822 529 aa17.3■□□□□ 0.36
PPP3R1-201ENST00000234310 CWF19L2Q2TBE0 894 aaKnown RBP17.3■□□□□ 0.36
PPP3R1-201ENST00000234310 DNAAF4Q8WXU2 420 aa17.3■□□□□ 0.36
PPP3R1-201ENST00000234310 PIP4K2AP48426 406 aaPredicted RBP17.3■□□□□ 0.36
PPP3R1-201ENST00000234310 LMO7Q8WWI1 1683 aa17.3■□□□□ 0.36
PPP3R1-201ENST00000234310 CACNA1FO60840 1977 aa17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 CHAMP1Q96JM3 812 aa17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 OSBPL3Q9H4L5 887 aa17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 PALD1Q9ULE6 856 aa17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 TRPM3Q9HCF6 1732 aaPredicted RBP17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 AIMP1Q12904 312 aaKnown RBP17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 ZGPATQ8N5A5 531 aaKnown RBP17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 BABAM1Q9NWV8 329 aa17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 SLIT3O75094 1523 aa17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 ERC2O15083 957 aa17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 RAB3GAP1Q15042 981 aa17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 NOL8Q76FK4 1167 aaKnown RBP17.29■□□□□ 0.36
PPP3R1-201ENST00000234310 NLRP2Q9NX02 1062 aa17.28■□□□□ 0.36
PPP3R1-201ENST00000234310 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
PPP3R1-201ENST00000234310 GIGYF1O75420 1035 aaPredicted RBP17.28■□□□□ 0.36
PPP3R1-201ENST00000234310 SSH3Q8TE77 659 aa17.28■□□□□ 0.36
PPP3R1-201ENST00000234310 TUBGCP6Q96RT7 1819 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms