RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 DLG5Q8TDM6 1919 aa11.62□□□□□ -0.55
HLA-DOA-201ENST00000229829 DDX11L8A8MPP1 907 aa11.62□□□□□ -0.55
HLA-DOA-201ENST00000229829 CALD1Q05682 793 aaKnown RBP11.62□□□□□ -0.55
HLA-DOA-201ENST00000229829 GAS2L3Q86XJ1 694 aa11.62□□□□□ -0.55
HLA-DOA-201ENST00000229829 GAS2L2Q8NHY3 880 aa11.62□□□□□ -0.55
HLA-DOA-201ENST00000229829 OTUD7AQ8TE49 926 aaPredicted RBP11.62□□□□□ -0.55
HLA-DOA-201ENST00000229829 RAB3GAP1Q15042 981 aa11.62□□□□□ -0.55
HLA-DOA-201ENST00000229829 MPNDQ8N594 471 aa11.62□□□□□ -0.55
HLA-DOA-201ENST00000229829 XPCQ01831 940 aaPredicted RBP11.61□□□□□ -0.55
HLA-DOA-201ENST00000229829 NUDT16Q96DE0 195 aaKnown RBP11.61□□□□□ -0.55
HLA-DOA-201ENST00000229829 PAPPAQ13219 1627 aa11.61□□□□□ -0.55
HLA-DOA-201ENST00000229829 APBB1O00213 710 aa11.61□□□□□ -0.55
HLA-DOA-201ENST00000229829 PLEKHM2Q8IWE5 1019 aa11.61□□□□□ -0.55
HLA-DOA-201ENST00000229829 COG3Q96JB2 828 aa11.61□□□□□ -0.55
HLA-DOA-201ENST00000229829 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
HLA-DOA-201ENST00000229829 K7ELQ4 463 aaPredicted RBP11.61□□□□□ -0.55
HLA-DOA-201ENST00000229829 METP08581 1390 aa11.61□□□□□ -0.55
HLA-DOA-201ENST00000229829 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
HLA-DOA-201ENST00000229829 UQCRHLA0A096LP55 91 aa11.6□□□□□ -0.55
HLA-DOA-201ENST00000229829 UQCRHP07919 91 aa11.6□□□□□ -0.55
HLA-DOA-201ENST00000229829 SSFA2P28290 1259 aa11.6□□□□□ -0.55
HLA-DOA-201ENST00000229829 BCL9O00512 1426 aa11.6□□□□□ -0.55
HLA-DOA-201ENST00000229829 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
HLA-DOA-201ENST00000229829 NUTM2FA1L443 756 aa11.59□□□□□ -0.55
HLA-DOA-201ENST00000229829 SMARCA5O60264 1052 aaPredicted RBP11.59□□□□□ -0.55
HLA-DOA-201ENST00000229829 CDC45O75419 566 aa11.59□□□□□ -0.55
HLA-DOA-201ENST00000229829 MCM10Q7L590 875 aa11.59□□□□□ -0.55
HLA-DOA-201ENST00000229829 API5Q9BZZ5 524 aaKnown RBP11.59□□□□□ -0.55
HLA-DOA-201ENST00000229829 CHMP4BQ9H444 224 aaKnown RBP11.59□□□□□ -0.55
HLA-DOA-201ENST00000229829 SULT6B1Q6IMI4 303 aa11.59□□□□□ -0.55
HLA-DOA-201ENST00000229829 DCTPP1Q9H773 170 aa11.59□□□□□ -0.55
HLA-DOA-201ENST00000229829 TBX22Q9Y458 520 aa11.59□□□□□ -0.55
HLA-DOA-201ENST00000229829 NCAPD2Q15021 1401 aa11.59□□□□□ -0.55
HLA-DOA-201ENST00000229829 SSH2Q76I76 1423 aa11.59□□□□□ -0.55
HLA-DOA-201ENST00000229829 ADRA2BP18089 450 aa11.58□□□□□ -0.56
HLA-DOA-201ENST00000229829 NASPP49321 788 aaPredicted RBP11.58□□□□□ -0.56
HLA-DOA-201ENST00000229829 PRDM4Q9UKN5 801 aa11.58□□□□□ -0.56
HLA-DOA-201ENST00000229829 CIZ1Q9ULV3 898 aaPredicted RBP11.58□□□□□ -0.56
HLA-DOA-201ENST00000229829 CCDC61Q9Y6R9 512 aa11.58□□□□□ -0.56
HLA-DOA-201ENST00000229829 SOX12O15370 315 aa11.58□□□□□ -0.56
HLA-DOA-201ENST00000229829 IGSF3O75054 1194 aa11.58□□□□□ -0.56
HLA-DOA-201ENST00000229829 GBP4Q96PP9 640 aa11.58□□□□□ -0.56
HLA-DOA-201ENST00000229829 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
HLA-DOA-201ENST00000229829 PTMAP06454 111 aaKnown RBP11.57□□□□□ -0.56
HLA-DOA-201ENST00000229829 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.57□□□□□ -0.56
HLA-DOA-201ENST00000229829 PRR36Q9H6K5 1346 aa11.57□□□□□ -0.56
HLA-DOA-201ENST00000229829 EIF4A2Q14240 407 aaKnown RBP11.57□□□□□ -0.56
HLA-DOA-201ENST00000229829 LMOD3Q0VAK6 560 aa11.56□□□□□ -0.56
HLA-DOA-201ENST00000229829 TTC22Q5TAA0 569 aa11.56□□□□□ -0.56
HLA-DOA-201ENST00000229829 CASZ1Q86V15 1759 aa11.56□□□□□ -0.56
HLA-DOA-201ENST00000229829 AATKQ6ZMQ8 1374 aa11.56□□□□□ -0.56
HLA-DOA-201ENST00000229829 VGLL3A8MV65 326 aa11.56□□□□□ -0.56
HLA-DOA-201ENST00000229829 INTS3Q68E01 1043 aaKnown RBP11.56□□□□□ -0.56
HLA-DOA-201ENST00000229829 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
HLA-DOA-201ENST00000229829 MEIS3Q99687 375 aa11.56□□□□□ -0.56
HLA-DOA-201ENST00000229829 CBX1P83916 185 aa11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 PKP1Q13835 747 aa11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 ZSCAN30Q86W11 494 aa11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 DDX49Q9Y6V7 483 aaKnown RBP11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 CEP85Q6P2H3 762 aa11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 ANKRD44Q8N8A2 993 aa11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 USP26Q9BXU7 913 aa11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 RGS12O14924 1447 aa11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 ATP10DQ9P241 1426 aa11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 SDSP20132 328 aa11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 TSC1Q92574 1164 aa11.55□□□□□ -0.56
HLA-DOA-201ENST00000229829 MSH6P52701 1360 aa11.54□□□□□ -0.56
HLA-DOA-201ENST00000229829 FOXO3O43524 673 aa11.54□□□□□ -0.56
HLA-DOA-201ENST00000229829 FAM177BA6PVY3 158 aa11.54□□□□□ -0.56
HLA-DOA-201ENST00000229829 CHL1O00533 1208 aa11.54□□□□□ -0.56
HLA-DOA-201ENST00000229829 BAG4O95429 457 aaKnown RBP11.54□□□□□ -0.56
HLA-DOA-201ENST00000229829 F6X3S4 739 aa11.53□□□□□ -0.56
HLA-DOA-201ENST00000229829 LY75O60449 1722 aa11.53□□□□□ -0.56
HLA-DOA-201ENST00000229829 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
HLA-DOA-201ENST00000229829 G2E3Q7L622 706 aa11.53□□□□□ -0.56
HLA-DOA-201ENST00000229829 RTL1A6NKG5 1358 aa11.53□□□□□ -0.56
HLA-DOA-201ENST00000229829 NHSQ6T4R5 1651 aa11.53□□□□□ -0.56
HLA-DOA-201ENST00000229829 GOLGA6L22H0YM25 854 aa11.52□□□□□ -0.56
HLA-DOA-201ENST00000229829 CDK11BP21127 795 aaKnown RBP11.52□□□□□ -0.56
HLA-DOA-201ENST00000229829 CHAMP1Q96JM3 812 aa11.52□□□□□ -0.56
HLA-DOA-201ENST00000229829 NUP188Q5SRE5 1749 aa11.52□□□□□ -0.56
HLA-DOA-201ENST00000229829 BRWD3Q6RI45 1802 aa11.52□□□□□ -0.56
HLA-DOA-201ENST00000229829 SKOR2Q2VWA4 1001 aaPredicted RBP11.52□□□□□ -0.57
HLA-DOA-201ENST00000229829 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
HLA-DOA-201ENST00000229829 SLC4A10Q6U841 1118 aa11.52□□□□□ -0.57
HLA-DOA-201ENST00000229829 ZGPATQ8N5A5 531 aaKnown RBP11.52□□□□□ -0.57
HLA-DOA-201ENST00000229829 CERKQ8TCT0 537 aa11.52□□□□□ -0.57
HLA-DOA-201ENST00000229829 FOXD4L4Q8WXT5 416 aaPredicted RBP11.52□□□□□ -0.57
HLA-DOA-201ENST00000229829 RABEP1Q15276 862 aa11.51□□□□□ -0.57
HLA-DOA-201ENST00000229829 TSHZ3Q63HK5 1081 aa11.51□□□□□ -0.57
HLA-DOA-201ENST00000229829 RPAP2Q8IXW5 612 aaPredicted RBP11.51□□□□□ -0.57
HLA-DOA-201ENST00000229829 JARID2Q92833 1246 aaPredicted RBP11.51□□□□□ -0.57
HLA-DOA-201ENST00000229829 NFAT5O94916 1531 aa11.51□□□□□ -0.57
HLA-DOA-201ENST00000229829 MCTP1Q6DN14 999 aa11.51□□□□□ -0.57
HLA-DOA-201ENST00000229829 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.51□□□□□ -0.57
HLA-DOA-201ENST00000229829 TTC21BQ7Z4L5 1316 aa11.51□□□□□ -0.57
HLA-DOA-201ENST00000229829 LRRC37A3O60309 1634 aa11.51□□□□□ -0.57
HLA-DOA-201ENST00000229829 DISP2A7MBM2 1401 aa11.51□□□□□ -0.57
HLA-DOA-201ENST00000229829 ACEP12821 1306 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms