RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 SF3A1Q15459 793 aaKnown RBP17.31■□□□□ 0.36
PRDM4-201ENST00000228437 IL16Q14005 1332 aa17.31■□□□□ 0.36
PRDM4-201ENST00000228437 UVSSAQ2YD98 709 aa17.31■□□□□ 0.36
PRDM4-201ENST00000228437 SPATA32Q96LK8 384 aa17.31■□□□□ 0.36
PRDM4-201ENST00000228437 PDRG1Q9NUG6 133 aa17.31■□□□□ 0.36
PRDM4-201ENST00000228437 GTF2F1P35269 517 aaKnown RBP eCLIP17.3■□□□□ 0.36
PRDM4-201ENST00000228437 CEP170Q5SW79 1584 aa17.3■□□□□ 0.36
PRDM4-201ENST00000228437 SYT1P21579 422 aa17.3■□□□□ 0.36
PRDM4-201ENST00000228437 PTPN14Q15678 1187 aa17.29■□□□□ 0.36
PRDM4-201ENST00000228437 ANO6Q4KMQ2 910 aa17.29■□□□□ 0.36
PRDM4-201ENST00000228437 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
PRDM4-201ENST00000228437 ZMYM3Q14202 1370 aa17.29■□□□□ 0.36
PRDM4-201ENST00000228437 SMC2O95347 1197 aa17.29■□□□□ 0.36
PRDM4-201ENST00000228437 C14orf93Q9H972 538 aaKnown RBP17.29■□□□□ 0.36
PRDM4-201ENST00000228437 ARHGAP45Q92619 1136 aa17.29■□□□□ 0.36
PRDM4-201ENST00000228437 PTPRTO14522 1441 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 PRDM15P57071 1507 aaPredicted RBP17.28■□□□□ 0.36
PRDM4-201ENST00000228437 IFIT2P09913 472 aaKnown RBP17.28■□□□□ 0.36
PRDM4-201ENST00000228437 ZSCAN20P17040 1043 aaPredicted RBP17.28■□□□□ 0.36
PRDM4-201ENST00000228437 AMPHP49418 695 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 MNS1Q8NEH6 495 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 TMX1Q9H3N1 280 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 CYP46A1Q9Y6A2 500 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 SDF4Q9BRK5 362 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 DNAJC25Q9H1X3 360 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 DACT1Q9NYF0 836 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 KIF20AO95235 890 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 ZNF165P49910 485 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 LIMCH1Q9UPQ0 1083 aa17.28■□□□□ 0.36
PRDM4-201ENST00000228437 IBTKQ9P2D0 1353 aaPredicted RBP17.27■□□□□ 0.36
PRDM4-201ENST00000228437 AK2P54819 239 aa17.27■□□□□ 0.36
PRDM4-201ENST00000228437 SRGAP3O43295 1099 aa17.27■□□□□ 0.36
PRDM4-201ENST00000228437 G2E3Q7L622 706 aa17.27■□□□□ 0.36
PRDM4-201ENST00000228437 IFT140Q96RY7 1462 aa17.27■□□□□ 0.35
PRDM4-201ENST00000228437 PLEKHF1Q96S99 279 aa17.27■□□□□ 0.35
PRDM4-201ENST00000228437 GNAI3P08754 354 aa17.26■□□□□ 0.35
PRDM4-201ENST00000228437 NUTM2GQ5VZR2 741 aa17.26■□□□□ 0.35
PRDM4-201ENST00000228437 RUFY2Q8WXA3 655 aa17.26■□□□□ 0.35
PRDM4-201ENST00000228437 POLKQ9UBT6 870 aa17.26■□□□□ 0.35
PRDM4-201ENST00000228437 NRBP1Q9UHY1 535 aa17.26■□□□□ 0.35
PRDM4-201ENST00000228437 F13A1P00488 732 aa17.26■□□□□ 0.35
PRDM4-201ENST00000228437 CEP135Q66GS9 1140 aa17.26■□□□□ 0.35
PRDM4-201ENST00000228437 TRPM1Q7Z4N2 1603 aa17.26■□□□□ 0.35
PRDM4-201ENST00000228437 EIF2AK4Q9P2K8 1649 aaKnown RBP17.26■□□□□ 0.35
PRDM4-201ENST00000228437 RTEL1-TNFRSF6BF6WH68 1400 aa17.26■□□□□ 0.35
PRDM4-201ENST00000228437 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
PRDM4-201ENST00000228437 ERVK-7P63135 1459 aa17.25■□□□□ 0.35
PRDM4-201ENST00000228437 CHMLP26374 656 aa17.25■□□□□ 0.35
PRDM4-201ENST00000228437 GTF3C6Q969F1 213 aa17.25■□□□□ 0.35
PRDM4-201ENST00000228437 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
PRDM4-201ENST00000228437 EIF4G3O43432 1585 aaKnown RBP17.25■□□□□ 0.35
PRDM4-201ENST00000228437 ZNF710Q8N1W2 664 aa17.25■□□□□ 0.35
PRDM4-201ENST00000228437 CCDC73Q6ZRK6 1079 aa17.25■□□□□ 0.35
PRDM4-201ENST00000228437 C9orf78Q9NZ63 289 aaPredicted RBP17.24■□□□□ 0.35
PRDM4-201ENST00000228437 A0A1W2PP64 1363 aa17.24■□□□□ 0.35
PRDM4-201ENST00000228437 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
PRDM4-201ENST00000228437 ADGBQ8N7X0 1667 aa17.24■□□□□ 0.35
PRDM4-201ENST00000228437 LMOD2Q6P5Q4 547 aa17.24■□□□□ 0.35
PRDM4-201ENST00000228437 CREBRFQ8IUR6 639 aa17.24■□□□□ 0.35
PRDM4-201ENST00000228437 GPATCH3Q96I76 525 aa17.24■□□□□ 0.35
PRDM4-201ENST00000228437 TYRO3Q06418 890 aa17.24■□□□□ 0.35
PRDM4-201ENST00000228437 CCT4P50991 539 aaKnown RBP17.23■□□□□ 0.35
PRDM4-201ENST00000228437 FAM200AQ8TCP9 573 aa17.23■□□□□ 0.35
PRDM4-201ENST00000228437 MSH6P52701 1360 aa17.23■□□□□ 0.35
PRDM4-201ENST00000228437 TEX35Q5T0J7 233 aa17.23■□□□□ 0.35
PRDM4-201ENST00000228437 GUCY1B3Q02153 619 aa17.23■□□□□ 0.35
PRDM4-201ENST00000228437 KRT222Q8N1A0 295 aa17.23■□□□□ 0.35
PRDM4-201ENST00000228437 SIL1Q9H173 461 aa17.23■□□□□ 0.35
PRDM4-201ENST00000228437 OGFRQ9NZT2 677 aa17.23■□□□□ 0.35
PRDM4-201ENST00000228437 ANKRD36BQ8N2N9 1353 aa17.23■□□□□ 0.35
PRDM4-201ENST00000228437 RAB11FIP3O75154 756 aa17.23■□□□□ 0.35
PRDM4-201ENST00000228437 UNC5CLQ8IV45 518 aa17.22■□□□□ 0.35
PRDM4-201ENST00000228437 STK11IPQ8N1F8 1099 aa17.22■□□□□ 0.35
PRDM4-201ENST00000228437 TXNDC2Q86VQ3 553 aa17.22■□□□□ 0.35
PRDM4-201ENST00000228437 CLASRPQ8N2M8 674 aaKnown RBP17.21■□□□□ 0.35
PRDM4-201ENST00000228437 FSD1Q9BTV5 496 aa17.21■□□□□ 0.35
PRDM4-201ENST00000228437 KINO60870 393 aaKnown RBP17.21■□□□□ 0.35
PRDM4-201ENST00000228437 CYP2E1P05181 493 aaPredicted RBP17.21■□□□□ 0.35
PRDM4-201ENST00000228437 ISM2Q6H9L7 571 aa17.21■□□□□ 0.35
PRDM4-201ENST00000228437 SKILP12757 684 aa17.21■□□□□ 0.35
PRDM4-201ENST00000228437 A0A087WWV3 80 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 TIGD1Q96MW7 591 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 SYNMO15061 1565 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 NCOA3Q9Y6Q9 1424 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 ELF2Q15723 593 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 UTP14CQ5TAP6 766 aaKnown RBP17.2■□□□□ 0.34
PRDM4-201ENST00000228437 ERCC4Q92889 916 aaPredicted RBP17.2■□□□□ 0.34
PRDM4-201ENST00000228437 ADAMTS12P58397 1594 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 NCKAP5LQ9HCH0 1330 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 PNMA6EA0A0J9YXQ4 647 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 FOXO3O43524 673 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 ME1P48163 572 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 PDILTQ8N807 584 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 KIF18AQ8NI77 898 aa17.2■□□□□ 0.34
PRDM4-201ENST00000228437 BIN1O00499 593 aa17.19■□□□□ 0.34
PRDM4-201ENST00000228437 ANXA1P04083 346 aa17.19■□□□□ 0.34
PRDM4-201ENST00000228437 AIMP1Q12904 312 aaKnown RBP17.19■□□□□ 0.34
PRDM4-201ENST00000228437 KIAA1524Q8TCG1 905 aa17.19■□□□□ 0.34
PRDM4-201ENST00000228437 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms