RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 ZNF853P0CG23 659 aa14.45□□□□□ -0.1
CTSC-201ENST00000227266 DUSP27Q5VZP5 1158 aa14.45□□□□□ -0.1
CTSC-201ENST00000227266 SYTL4Q96C24 671 aaPredicted RBP14.45□□□□□ -0.1
CTSC-201ENST00000227266 MBIPQ9NS73 344 aa14.45□□□□□ -0.1
CTSC-201ENST00000227266 BTBD11A6QL63 1104 aa14.44□□□□□ -0.1
CTSC-201ENST00000227266 CHL1O00533 1208 aa14.44□□□□□ -0.1
CTSC-201ENST00000227266 ACSBG1Q96GR2 724 aa14.44□□□□□ -0.1
CTSC-201ENST00000227266 KRT27Q7Z3Y8 459 aa14.43□□□□□ -0.1
CTSC-201ENST00000227266 TRMT2AQ8IZ69 625 aaKnown RBP14.43□□□□□ -0.1
CTSC-201ENST00000227266 TMOD3Q9NYL9 352 aa14.43□□□□□ -0.1
CTSC-201ENST00000227266 PRIM1P49642 420 aaKnown RBP14.43□□□□□ -0.1
CTSC-201ENST00000227266 RGS12O14924 1447 aa14.41□□□□□ -0.1
CTSC-201ENST00000227266 EXOSC9Q06265 439 aaKnown RBP14.41□□□□□ -0.1
CTSC-201ENST00000227266 SLC39A6Q13433 755 aa14.41□□□□□ -0.1
CTSC-201ENST00000227266 PIGBQ92521 554 aa14.41□□□□□ -0.1
CTSC-201ENST00000227266 ADAMTS7Q9UKP4 1686 aa14.4□□□□□ -0.1
CTSC-201ENST00000227266 KCNQ3O43525 872 aa14.4□□□□□ -0.1
CTSC-201ENST00000227266 BABAM1Q9NWV8 329 aa14.4□□□□□ -0.1
CTSC-201ENST00000227266 MRC1P22897 1456 aa14.4□□□□□ -0.1
CTSC-201ENST00000227266 KCNQ2O43526 872 aa14.39□□□□□ -0.11
CTSC-201ENST00000227266 ELL2O00472 640 aaPredicted RBP14.39□□□□□ -0.11
CTSC-201ENST00000227266 KRT24Q2M2I5 525 aa14.39□□□□□ -0.11
CTSC-201ENST00000227266 ZNF790Q6PG37 636 aa14.39□□□□□ -0.11
CTSC-201ENST00000227266 TTC5Q8N0Z6 440 aa14.39□□□□□ -0.11
CTSC-201ENST00000227266 SCN11AQ9UI33 1791 aa14.38□□□□□ -0.11
CTSC-201ENST00000227266 TOGARAM1Q9Y4F4 1720 aa14.37□□□□□ -0.11
CTSC-201ENST00000227266 FAM196AQ6ZSG2 479 aa14.37□□□□□ -0.11
CTSC-201ENST00000227266 C8orf58Q8NAV2 365 aa14.37□□□□□ -0.11
CTSC-201ENST00000227266 ASAP1Q9ULH1 1129 aa14.37□□□□□ -0.11
CTSC-201ENST00000227266 BCL9O00512 1426 aa14.37□□□□□ -0.11
CTSC-201ENST00000227266 PTF1AQ7RTS3 328 aa14.37□□□□□ -0.11
CTSC-201ENST00000227266 TSPYL6Q8N831 410 aa14.37□□□□□ -0.11
CTSC-201ENST00000227266 EP400Q96L91 3159 aa14.36□□□□□ -0.11
CTSC-201ENST00000227266 EIF4A1P60842 406 aaKnown RBP14.36□□□□□ -0.11
CTSC-201ENST00000227266 PTCD1O75127 700 aaKnown RBP14.35□□□□□ -0.11
CTSC-201ENST00000227266 TWISTNBQ3B726 338 aaPredicted RBP14.35□□□□□ -0.11
CTSC-201ENST00000227266 ATG3Q9NT62 314 aa14.35□□□□□ -0.11
CTSC-201ENST00000227266 DOT1LQ8TEK3 1739 aa14.35□□□□□ -0.11
CTSC-201ENST00000227266 ZNF496Q96IT1 587 aaPredicted RBP14.35□□□□□ -0.11
CTSC-201ENST00000227266 FMNL2Q96PY5 1086 aa14.34□□□□□ -0.11
CTSC-201ENST00000227266 TRIM37O94972 964 aa14.33□□□□□ -0.11
CTSC-201ENST00000227266 SUPT16HQ9Y5B9 1047 aaKnown RBP14.33□□□□□ -0.11
CTSC-201ENST00000227266 BRWD3Q6RI45 1802 aa14.33□□□□□ -0.12
CTSC-201ENST00000227266 VAMP4O75379 141 aa14.33□□□□□ -0.12
CTSC-201ENST00000227266 RBM42Q9BTD8 480 aaKnown RBP14.33□□□□□ -0.12
CTSC-201ENST00000227266 RCAN3Q9UKA8 241 aa14.33□□□□□ -0.12
CTSC-201ENST00000227266 KAT6BQ8WYB5 2073 aa14.33□□□□□ -0.12
CTSC-201ENST00000227266 SIPA1L3O60292 1781 aaPredicted RBP14.33□□□□□ -0.12
CTSC-201ENST00000227266 VIRMAQ69YN4 1812 aaKnown RBP14.32□□□□□ -0.12
CTSC-201ENST00000227266 BCL11BQ9C0K0 894 aaPredicted RBP14.32□□□□□ -0.12
CTSC-201ENST00000227266 PRAMEF22A3QJZ6 481 aa14.31□□□□□ -0.12
CTSC-201ENST00000227266 GIGYF1O75420 1035 aaPredicted RBP14.31□□□□□ -0.12
CTSC-201ENST00000227266 CT47B1P0C2W7 299 aaPredicted RBP14.31□□□□□ -0.12
CTSC-201ENST00000227266 NECTIN2Q92692 538 aa14.31□□□□□ -0.12
CTSC-201ENST00000227266 TCERG1O14776 1098 aaKnown RBP14.31□□□□□ -0.12
CTSC-201ENST00000227266 SMARCC1Q92922 1105 aaPredicted RBP14.31□□□□□ -0.12
CTSC-201ENST00000227266 BCL2L13Q9BXK5 485 aa14.31□□□□□ -0.12
CTSC-201ENST00000227266 KDM3BQ7LBC6 1761 aa14.3□□□□□ -0.12
CTSC-201ENST00000227266 SNRPA1P09661 255 aaKnown RBP14.3□□□□□ -0.12
CTSC-201ENST00000227266 EIF2S2P20042 333 aaKnown RBP14.3□□□□□ -0.12
CTSC-201ENST00000227266 PALLDQ8WX93 1383 aa14.3□□□□□ -0.12
CTSC-201ENST00000227266 HEG1Q9ULI3 1381 aa14.3□□□□□ -0.12
CTSC-201ENST00000227266 ITGB4P16144 1822 aa14.29□□□□□ -0.12
CTSC-201ENST00000227266 RARSP54136 660 aaKnown RBP14.29□□□□□ -0.12
CTSC-201ENST00000227266 HDGFL1Q5TGJ6 251 aa14.29□□□□□ -0.12
CTSC-201ENST00000227266 KCPQ6ZWJ8 1503 aa14.29□□□□□ -0.12
CTSC-201ENST00000227266 HOXB7P09629 217 aa14.29□□□□□ -0.12
CTSC-201ENST00000227266 BCAR3O75815 825 aa14.28□□□□□ -0.12
CTSC-201ENST00000227266 SSH1Q8WYL5 1049 aa14.28□□□□□ -0.12
CTSC-201ENST00000227266 SMC4Q9NTJ3 1288 aa14.28□□□□□ -0.12
CTSC-201ENST00000227266 SOS1Q07889 1333 aaPredicted RBP14.28□□□□□ -0.12
CTSC-201ENST00000227266 LOC102724428A0A0B4J2F2 783 aa14.27□□□□□ -0.12
CTSC-201ENST00000227266 SIK1P57059 783 aa14.27□□□□□ -0.12
CTSC-201ENST00000227266 ZNF428Q96B54 188 aa14.27□□□□□ -0.12
CTSC-201ENST00000227266 SLC4A9Q96Q91 983 aa14.27□□□□□ -0.12
CTSC-201ENST00000227266 USP16Q9Y5T5 823 aa14.27□□□□□ -0.12
CTSC-201ENST00000227266 NHSQ6T4R5 1651 aa14.27□□□□□ -0.12
CTSC-201ENST00000227266 PAPPAQ13219 1627 aa14.27□□□□□ -0.12
CTSC-201ENST00000227266 CCDC30Q5VVM6 783 aa14.27□□□□□ -0.13
CTSC-201ENST00000227266 DNAJC10Q8IXB1 793 aa14.27□□□□□ -0.13
CTSC-201ENST00000227266 VSIG10Q8N0Z9 540 aa14.27□□□□□ -0.13
CTSC-201ENST00000227266 ATP6V1AP38606 617 aa14.26□□□□□ -0.13
CTSC-201ENST00000227266 STK31Q9BXU1 1019 aa14.26□□□□□ -0.13
CTSC-201ENST00000227266 APBA3O96018 575 aa14.25□□□□□ -0.13
CTSC-201ENST00000227266 KCNQ4P56696 695 aa14.25□□□□□ -0.13
CTSC-201ENST00000227266 ALDH1L2Q3SY69 923 aa14.25□□□□□ -0.13
CTSC-201ENST00000227266 CHMP4AQ9BY43 222 aa14.25□□□□□ -0.13
CTSC-201ENST00000227266 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
CTSC-201ENST00000227266 TEX13AQ9BXU3 409 aaPredicted RBP14.25□□□□□ -0.13
CTSC-201ENST00000227266 CHPF2Q9P2E5 772 aa14.25□□□□□ -0.13
CTSC-201ENST00000227266 STARD3NLO95772 234 aa14.24□□□□□ -0.13
CTSC-201ENST00000227266 POTEDQ86YR6 584 aa14.24□□□□□ -0.13
CTSC-201ENST00000227266 FRAT1Q92837 279 aaPredicted RBP14.24□□□□□ -0.13
CTSC-201ENST00000227266 CCNL1Q9UK58 526 aaPredicted RBP14.24□□□□□ -0.13
CTSC-201ENST00000227266 ANXA1P04083 346 aa14.23□□□□□ -0.13
CTSC-201ENST00000227266 PIP4K2AP48426 406 aaPredicted RBP14.23□□□□□ -0.13
CTSC-201ENST00000227266 ITPK1Q13572 414 aa14.23□□□□□ -0.13
CTSC-201ENST00000227266 MRPL50Q8N5N7 158 aaKnown RBP14.23□□□□□ -0.13
CTSC-201ENST00000227266 BTAF1O14981 1849 aa14.23□□□□□ -0.13
CTSC-201ENST00000227266 UBR2Q8IWV8 1755 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms