RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 MS4A1P11836 297 aa6.76□□□□□ -1.33
RUFY3-201ENST00000226328 ST5P78524 1137 aa6.76□□□□□ -1.33
RUFY3-201ENST00000226328 PRKRIP1Q9H875 184 aaPredicted RBP6.76□□□□□ -1.33
RUFY3-201ENST00000226328 AXIN2Q9Y2T1 843 aa6.76□□□□□ -1.33
RUFY3-201ENST00000226328 NPC1L1Q9UHC9 1359 aa6.76□□□□□ -1.33
RUFY3-201ENST00000226328 SNRPA1P09661 255 aaKnown RBP6.76□□□□□ -1.33
RUFY3-201ENST00000226328 PHRF1Q9P1Y6 1649 aaKnown RBP6.76□□□□□ -1.33
RUFY3-201ENST00000226328 PHKG2P15735 406 aa6.75□□□□□ -1.33
RUFY3-201ENST00000226328 CD163L1Q9NR16 1453 aa6.75□□□□□ -1.33
RUFY3-201ENST00000226328 EZH2Q15910 746 aaKnown RBP6.75□□□□□ -1.33
RUFY3-201ENST00000226328 BICDL1Q6ZP65 573 aa6.75□□□□□ -1.33
RUFY3-201ENST00000226328 YTHDC1Q96MU7 727 aaKnown RBP6.75□□□□□ -1.33
RUFY3-201ENST00000226328 ATRNO75882 1429 aa6.75□□□□□ -1.33
RUFY3-201ENST00000226328 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.75□□□□□ -1.33
RUFY3-201ENST00000226328 LOC102724428A0A0B4J2F2 783 aa6.75□□□□□ -1.33
RUFY3-201ENST00000226328 SIK1P57059 783 aa6.75□□□□□ -1.33
RUFY3-201ENST00000226328 ILDR2Q71H61 639 aa6.75□□□□□ -1.33
RUFY3-201ENST00000226328 RIC3Q7Z5B4 369 aa6.75□□□□□ -1.33
RUFY3-201ENST00000226328 NFATC2IPQ8NCF5 419 aa6.75□□□□□ -1.33
RUFY3-201ENST00000226328 ATF5Q9Y2D1 282 aaPredicted RBP6.74□□□□□ -1.33
RUFY3-201ENST00000226328 PLSCR1O15162 318 aa6.74□□□□□ -1.33
RUFY3-201ENST00000226328 IPO8O15397 1037 aaKnown RBP6.74□□□□□ -1.33
RUFY3-201ENST00000226328 C16orf71Q8IYS4 520 aaPredicted RBP6.74□□□□□ -1.33
RUFY3-201ENST00000226328 RNMTO43148 476 aaKnown RBP6.74□□□□□ -1.33
RUFY3-201ENST00000226328 CCDC30Q5VVM6 783 aa6.74□□□□□ -1.33
RUFY3-201ENST00000226328 MARCH10Q8NA82 808 aaPredicted RBP6.74□□□□□ -1.33
RUFY3-201ENST00000226328 SETDB2Q96T68 719 aa6.74□□□□□ -1.33
RUFY3-201ENST00000226328 CDK12Q9NYV4 1490 aaPredicted RBP6.74□□□□□ -1.33
RUFY3-201ENST00000226328 HDGFL1Q5TGJ6 251 aa6.74□□□□□ -1.33
RUFY3-201ENST00000226328 MAP3K5Q99683 1374 aa6.74□□□□□ -1.33
RUFY3-201ENST00000226328 PIK3C2AO00443 1686 aa6.73□□□□□ -1.33
RUFY3-201ENST00000226328 APAF1O14727 1248 aa6.73□□□□□ -1.33
RUFY3-201ENST00000226328 CENPBP07199 599 aaPredicted RBP6.73□□□□□ -1.33
RUFY3-201ENST00000226328 PALLDQ8WX93 1383 aa6.73□□□□□ -1.33
RUFY3-201ENST00000226328 FAM177BA6PVY3 158 aa6.73□□□□□ -1.33
RUFY3-201ENST00000226328 AIMP1Q12904 312 aaKnown RBP6.73□□□□□ -1.33
RUFY3-201ENST00000226328 SLC15A2Q16348 729 aa6.73□□□□□ -1.33
RUFY3-201ENST00000226328 AEBP1Q8IUX7 1158 aa6.73□□□□□ -1.33
RUFY3-201ENST00000226328 SLC52A2Q9HAB3 445 aa6.73□□□□□ -1.33
RUFY3-201ENST00000226328 CHMP3Q9Y3E7 222 aa6.73□□□□□ -1.33
RUFY3-201ENST00000226328 NRAPQ86VF7 1730 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 ZBTB7AO95365 584 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 FTSJ3Q8IY81 847 aaKnown RBP6.72□□□□□ -1.33
RUFY3-201ENST00000226328 IGSF1Q8N6C5 1336 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 SLIT3O75094 1523 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 PLCH1Q4KWH8 1693 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 CCER2I3L3R5 266 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 GRIN3BO60391 1043 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 IL13P35225 146 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 PPP1R42Q7Z4L9 355 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 NBPF5PQ86XG9 351 aaPredicted RBP6.72□□□□□ -1.33
RUFY3-201ENST00000226328 RPGRQ92834 1020 aaKnown RBP6.72□□□□□ -1.33
RUFY3-201ENST00000226328 NYXQ9GZU5 481 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 MTFR1LQ9H019 292 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 PDZRN3Q9UPQ7 1066 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 COL5A2P05997 1499 aaPredicted RBP6.72□□□□□ -1.33
RUFY3-201ENST00000226328 SLIT2O94813 1529 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 KCNQ2O43526 872 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 ONECUT3O60422 494 aaPredicted RBP6.72□□□□□ -1.33
RUFY3-201ENST00000226328 TPTE2Q6XPS3 522 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 ZNF622Q969S3 477 aaKnown RBP eCLIP6.72□□□□□ -1.332e-6■■■■□ 20.2
RUFY3-201ENST00000226328 NWD2Q9ULI1 1742 aa6.72□□□□□ -1.33
RUFY3-201ENST00000226328 MTHFSDQ2M296 383 aaKnown RBP6.71□□□□□ -1.33
RUFY3-201ENST00000226328 KCNJ4P48050 445 aa6.71□□□□□ -1.34
RUFY3-201ENST00000226328 NECTIN2Q92692 538 aa6.71□□□□□ -1.34
RUFY3-201ENST00000226328 ELL2O00472 640 aaPredicted RBP6.71□□□□□ -1.34
RUFY3-201ENST00000226328 ZBTB22O15209 634 aa6.71□□□□□ -1.34
RUFY3-201ENST00000226328 MCM10Q7L590 875 aa6.71□□□□□ -1.34
RUFY3-201ENST00000226328 LMO7Q8WWI1 1683 aa6.71□□□□□ -1.34
RUFY3-201ENST00000226328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.71□□□□□ -1.34
RUFY3-201ENST00000226328 MYL6BP14649 208 aa6.71□□□□□ -1.34
RUFY3-201ENST00000226328 SSFA2P28290 1259 aa6.71□□□□□ -1.34
RUFY3-201ENST00000226328 TMPOP42166 694 aaKnown RBP6.71□□□□□ -1.34
RUFY3-201ENST00000226328 CDK11BP21127 795 aaKnown RBP6.7□□□□□ -1.34
RUFY3-201ENST00000226328 SLC39A6Q13433 755 aa6.7□□□□□ -1.34
RUFY3-201ENST00000226328 TMEM132AQ24JP5 1023 aa6.7□□□□□ -1.34
RUFY3-201ENST00000226328 RGS17Q9UGC6 210 aaPredicted RBP6.7□□□□□ -1.34
RUFY3-201ENST00000226328 H0YIN7 160 aa6.7□□□□□ -1.34
RUFY3-201ENST00000226328 OS9Q13438 667 aaPredicted RBP6.7□□□□□ -1.34
RUFY3-201ENST00000226328 FKBP5Q13451 457 aaPredicted RBP6.7□□□□□ -1.34
RUFY3-201ENST00000226328 DZIP3Q86Y13 1208 aaKnown RBP6.7□□□□□ -1.34
RUFY3-201ENST00000226328 TNS2Q63HR2 1409 aa6.7□□□□□ -1.34
RUFY3-201ENST00000226328 BCL9LQ86UU0 1499 aa6.7□□□□□ -1.34
RUFY3-201ENST00000226328 COL14A1Q05707 1796 aaKnown RBP6.7□□□□□ -1.34
RUFY3-201ENST00000226328 FRAT2O75474 233 aaPredicted RBP6.7□□□□□ -1.34
RUFY3-201ENST00000226328 ZNF790Q6PG37 636 aa6.7□□□□□ -1.34
RUFY3-201ENST00000226328 PAXIP1Q6ZW49 1069 aaPredicted RBP6.7□□□□□ -1.34
RUFY3-201ENST00000226328 BABAM1Q9NWV8 329 aa6.7□□□□□ -1.34
RUFY3-201ENST00000226328 C9orf78Q9NZ63 289 aaPredicted RBP6.7□□□□□ -1.34
RUFY3-201ENST00000226328 RGS12O14924 1447 aa6.7□□□□□ -1.34
RUFY3-201ENST00000226328 ABCC6O95255 1503 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 MSL1Q68DK7 614 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 BCL11AQ9H165 835 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 E9PSI1 815 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 SLC4A10Q6U841 1118 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 DNAJC10Q8IXB1 793 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 CNBD1Q8NA66 436 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 PIGBQ92521 554 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 HYPKQ9NX55 129 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 DBF4Q9UBU7 674 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms