RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.32■□□□□ 0.36
SFXN3-201ENST00000224807 V9GYY5 206 aaPredicted RBP17.32■□□□□ 0.36
SFXN3-201ENST00000224807 CHAF1AQ13111 956 aaPredicted RBP17.32■□□□□ 0.36
SFXN3-201ENST00000224807 ZNF771Q7L3S4 317 aaPredicted RBP17.32■□□□□ 0.36
SFXN3-201ENST00000224807 MYRIPQ8NFW9 859 aa17.32■□□□□ 0.36
SFXN3-201ENST00000224807 PYCARDQ9ULZ3 195 aa17.32■□□□□ 0.36
SFXN3-201ENST00000224807 ABCC3O15438 1527 aa17.31■□□□□ 0.36
SFXN3-201ENST00000224807 ABCC4O15439 1325 aa17.31■□□□□ 0.36
SFXN3-201ENST00000224807 SRCIN1Q9C0H9 1055 aa17.31■□□□□ 0.36
SFXN3-201ENST00000224807 IBTKQ9P2D0 1353 aaPredicted RBP17.31■□□□□ 0.36
SFXN3-201ENST00000224807 SMAP1Q8IYB5 467 aaPredicted RBP17.31■□□□□ 0.36
SFXN3-201ENST00000224807 ARHGAP45Q92619 1136 aa17.31■□□□□ 0.36
SFXN3-201ENST00000224807 FAM135BQ49AJ0 1406 aa17.31■□□□□ 0.36
SFXN3-201ENST00000224807 FOXO3O43524 673 aa17.3■□□□□ 0.36
SFXN3-201ENST00000224807 CKAP2LQ8IYA6 745 aa17.3■□□□□ 0.36
SFXN3-201ENST00000224807 CFAP44Q96MT7 982 aa17.3■□□□□ 0.36
SFXN3-201ENST00000224807 IL25Q9H293 177 aa17.3■□□□□ 0.36
SFXN3-201ENST00000224807 SPG7Q9UQ90 795 aa17.3■□□□□ 0.36
SFXN3-201ENST00000224807 RAPGEF3O95398 923 aa17.3■□□□□ 0.36
SFXN3-201ENST00000224807 BRD1O95696 1058 aa17.3■□□□□ 0.36
SFXN3-201ENST00000224807 IFT57Q9NWB7 429 aa17.3■□□□□ 0.36
SFXN3-201ENST00000224807 PIK3C2BO00750 1634 aa17.3■□□□□ 0.36
SFXN3-201ENST00000224807 RIOK3O14730 519 aaKnown RBP17.29■□□□□ 0.36
SFXN3-201ENST00000224807 FOSBP53539 338 aa17.29■□□□□ 0.36
SFXN3-201ENST00000224807 FKBP5Q13451 457 aaPredicted RBP17.29■□□□□ 0.36
SFXN3-201ENST00000224807 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
SFXN3-201ENST00000224807 TCEANC2Q96MN5 208 aa17.29■□□□□ 0.36
SFXN3-201ENST00000224807 ZBTB22O15209 634 aa17.29■□□□□ 0.36
SFXN3-201ENST00000224807 CGNQ9P2M7 1197 aaKnown RBP17.29■□□□□ 0.36
SFXN3-201ENST00000224807 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
SFXN3-201ENST00000224807 HMMRO75330 724 aa17.28■□□□□ 0.36
SFXN3-201ENST00000224807 PHF14O94880 888 aa17.28■□□□□ 0.36
SFXN3-201ENST00000224807 CCDC83Q8IWF9 413 aa17.28■□□□□ 0.36
SFXN3-201ENST00000224807 ZBTB9Q96C00 473 aa17.28■□□□□ 0.36
SFXN3-201ENST00000224807 ESYT1Q9BSJ8 1104 aa17.28■□□□□ 0.36
SFXN3-201ENST00000224807 ARHGAP31Q2M1Z3 1444 aa17.28■□□□□ 0.36
SFXN3-201ENST00000224807 PPFIA3O75145 1194 aa17.28■□□□□ 0.36
SFXN3-201ENST00000224807 ZSCAN20P17040 1043 aaPredicted RBP17.28■□□□□ 0.36
SFXN3-201ENST00000224807 DNM1Q05193 864 aaKnown RBP17.27■□□□□ 0.36
SFXN3-201ENST00000224807 ASXL2Q76L83 1435 aa17.27■□□□□ 0.36
SFXN3-201ENST00000224807 PTPRMP28827 1452 aa17.27■□□□□ 0.36
SFXN3-201ENST00000224807 PNMA6EA0A0J9YXQ4 647 aa17.27■□□□□ 0.36
SFXN3-201ENST00000224807 TERF1P54274 439 aa17.27■□□□□ 0.36
SFXN3-201ENST00000224807 LRMPQ12912 555 aa17.27■□□□□ 0.36
SFXN3-201ENST00000224807 MLECQ14165 292 aa17.27■□□□□ 0.36
SFXN3-201ENST00000224807 CWC27Q6UX04 472 aaKnown RBP17.27■□□□□ 0.36
SFXN3-201ENST00000224807 MTERF4Q7Z6M4 381 aaKnown RBP17.27■□□□□ 0.36
SFXN3-201ENST00000224807 REREQ9P2R6 1566 aa17.27■□□□□ 0.35
SFXN3-201ENST00000224807 ZFYVE9O95405 1425 aa17.27■□□□□ 0.35
SFXN3-201ENST00000224807 PTGS1P23219 599 aa17.27■□□□□ 0.35
SFXN3-201ENST00000224807 PIBF1Q8WXW3 757 aa17.27■□□□□ 0.35
SFXN3-201ENST00000224807 TRERF1Q96PN7 1200 aa17.27■□□□□ 0.35
SFXN3-201ENST00000224807 MX1P20591 662 aa17.26■□□□□ 0.35
SFXN3-201ENST00000224807 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
SFXN3-201ENST00000224807 NECAB1Q8N987 351 aa17.26■□□□□ 0.35
SFXN3-201ENST00000224807 SMC3Q9UQE7 1217 aa17.26■□□□□ 0.35
SFXN3-201ENST00000224807 MCM5P33992 734 aa17.26■□□□□ 0.35
SFXN3-201ENST00000224807 FBXO31Q5XUX0 539 aaPredicted RBP17.25■□□□□ 0.35
SFXN3-201ENST00000224807 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
SFXN3-201ENST00000224807 KCNJ4P48050 445 aa17.25■□□□□ 0.35
SFXN3-201ENST00000224807 TSPYL4Q9UJ04 414 aa17.25■□□□□ 0.35
SFXN3-201ENST00000224807 VGLL3A8MV65 326 aa17.24■□□□□ 0.35
SFXN3-201ENST00000224807 OS9Q13438 667 aaPredicted RBP17.24■□□□□ 0.35
SFXN3-201ENST00000224807 AP5Z1O43299 807 aa17.24■□□□□ 0.35
SFXN3-201ENST00000224807 LUZP1Q86V48 1076 aa17.24■□□□□ 0.35
SFXN3-201ENST00000224807 LRRCC1Q9C099 1032 aa17.24■□□□□ 0.35
SFXN3-201ENST00000224807 TFIP11Q9UBB9 837 aaKnown RBP17.24■□□□□ 0.35
SFXN3-201ENST00000224807 ZNF853P0CG23 659 aa17.24■□□□□ 0.35
SFXN3-201ENST00000224807 CEBPZQ03701 1054 aaKnown RBP17.24■□□□□ 0.35
SFXN3-201ENST00000224807 COG3Q96JB2 828 aa17.24■□□□□ 0.35
SFXN3-201ENST00000224807 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
SFXN3-201ENST00000224807 POGZQ7Z3K3 1410 aa17.24■□□□□ 0.35
SFXN3-201ENST00000224807 KIF20BQ96Q89 1820 aa17.24■□□□□ 0.35
SFXN3-201ENST00000224807 CLTCQ00610 1675 aaKnown RBP17.23■□□□□ 0.35
SFXN3-201ENST00000224807 ERICH4A6NGS2 130 aa17.23■□□□□ 0.35
SFXN3-201ENST00000224807 HMGN5P82970 282 aaKnown RBP17.23■□□□□ 0.35
SFXN3-201ENST00000224807 DMTNQ08495 405 aa17.23■□□□□ 0.35
SFXN3-201ENST00000224807 CCDC183Q5T5S1 534 aa17.23■□□□□ 0.35
SFXN3-201ENST00000224807 SYTL4Q96C24 671 aaPredicted RBP17.23■□□□□ 0.35
SFXN3-201ENST00000224807 LTV1Q96GA3 475 aaPredicted RBP17.23■□□□□ 0.35
SFXN3-201ENST00000224807 LRRFIP2Q9Y608 721 aaKnown RBP17.23■□□□□ 0.35
SFXN3-201ENST00000224807 MLH3Q9UHC1 1453 aa17.23■□□□□ 0.35
SFXN3-201ENST00000224807 SURF6O75683 361 aaKnown RBP17.22■□□□□ 0.35
SFXN3-201ENST00000224807 CHMLP26374 656 aa17.22■□□□□ 0.35
SFXN3-201ENST00000224807 STK3Q13188 491 aa17.22■□□□□ 0.35
SFXN3-201ENST00000224807 NRBP1Q9UHY1 535 aa17.22■□□□□ 0.35
SFXN3-201ENST00000224807 GOLGA6L4A6NEF3 574 aa17.22■□□□□ 0.35
SFXN3-201ENST00000224807 SYT1P21579 422 aa17.22■□□□□ 0.35
SFXN3-201ENST00000224807 TXNDC2Q86VQ3 553 aa17.22■□□□□ 0.35
SFXN3-201ENST00000224807 RTL1A6NKG5 1358 aa17.22■□□□□ 0.35
SFXN3-201ENST00000224807 A0A087WWV3 80 aa17.22■□□□□ 0.35
SFXN3-201ENST00000224807 CASTP20810 708 aaKnown RBP17.22■□□□□ 0.35
SFXN3-201ENST00000224807 YTHDC2Q9H6S0 1430 aaKnown RBP17.21■□□□□ 0.35
SFXN3-201ENST00000224807 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
SFXN3-201ENST00000224807 KDM4AO75164 1064 aa17.21■□□□□ 0.35
SFXN3-201ENST00000224807 LARGE1O95461 756 aa17.21■□□□□ 0.35
SFXN3-201ENST00000224807 IL13P35225 146 aa17.21■□□□□ 0.35
SFXN3-201ENST00000224807 AK2P54819 239 aa17.21■□□□□ 0.35
SFXN3-201ENST00000224807 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
SFXN3-201ENST00000224807 TRIM5Q9C035 493 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms