RNA–Protein interactions for RNA: ENST00000222266.2

PSENEN-201, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 603 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-201ENST00000222266 CCDC27Q2M243 656 aa13.29□□□□□ -0.28
PSENEN-201ENST00000222266 DEFB132Q7Z7B7 95 aa13.29□□□□□ -0.28
PSENEN-201ENST00000222266 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
PSENEN-201ENST00000222266 CAMKK2Q96RR4 588 aa13.29□□□□□ -0.28
PSENEN-201ENST00000222266 RRP7AQ9Y3A4 280 aaKnown RBP13.29□□□□□ -0.28
PSENEN-201ENST00000222266 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
PSENEN-201ENST00000222266 KAT6BQ8WYB5 2073 aa13.28□□□□□ -0.28
PSENEN-201ENST00000222266 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
PSENEN-201ENST00000222266 EZH2Q15910 746 aaKnown RBP13.28□□□□□ -0.28
PSENEN-201ENST00000222266 FMNL2Q96PY5 1086 aa13.28□□□□□ -0.28
PSENEN-201ENST00000222266 STK32BQ9NY57 414 aa13.28□□□□□ -0.28
PSENEN-201ENST00000222266 ASAP1Q9ULH1 1129 aa13.28□□□□□ -0.28
PSENEN-201ENST00000222266 KDM6AO15550 1401 aaPredicted RBP13.28□□□□□ -0.28
PSENEN-201ENST00000222266 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.29
PSENEN-201ENST00000222266 PTCD1O75127 700 aaKnown RBP13.27□□□□□ -0.29
PSENEN-201ENST00000222266 ATP6V1AP38606 617 aa13.27□□□□□ -0.29
PSENEN-201ENST00000222266 SIK1P57059 783 aa13.27□□□□□ -0.29
PSENEN-201ENST00000222266 GNAI1P63096 354 aa13.27□□□□□ -0.29
PSENEN-201ENST00000222266 ZNF790Q6PG37 636 aa13.27□□□□□ -0.29
PSENEN-201ENST00000222266 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.29
PSENEN-201ENST00000222266 ATG3Q9NT62 314 aa13.27□□□□□ -0.29
PSENEN-201ENST00000222266 TSPYL4Q9UJ04 414 aa13.27□□□□□ -0.29
PSENEN-201ENST00000222266 LAS1LQ9Y4W2 734 aaKnown RBP13.27□□□□□ -0.29
PSENEN-201ENST00000222266 STARD3NLO95772 234 aa13.26□□□□□ -0.29
PSENEN-201ENST00000222266 DCTN1Q14203 1278 aa13.26□□□□□ -0.29
PSENEN-201ENST00000222266 DOT1LQ8TEK3 1739 aa13.25□□□□□ -0.29
PSENEN-201ENST00000222266 SHANK3Q9BYB0 1731 aa13.25□□□□□ -0.29
PSENEN-201ENST00000222266 WDR63Q8IWG1 891 aa13.25□□□□□ -0.29
PSENEN-201ENST00000222266 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
PSENEN-201ENST00000222266 IL16Q14005 1332 aa13.24□□□□□ -0.29
PSENEN-201ENST00000222266 PTF1AQ7RTS3 328 aa13.24□□□□□ -0.29
PSENEN-201ENST00000222266 AK7Q96M32 723 aa13.24□□□□□ -0.29
PSENEN-201ENST00000222266 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
PSENEN-201ENST00000222266 MYH16Q9H6N6 1097 aa13.24□□□□□ -0.29
PSENEN-201ENST00000222266 IFT57Q9NWB7 429 aa13.24□□□□□ -0.29
PSENEN-201ENST00000222266 EP400Q96L91 3159 aa13.24□□□□□ -0.29
PSENEN-201ENST00000222266 MRC1P22897 1456 aa13.23□□□□□ -0.29
PSENEN-201ENST00000222266 SNRPA1P09661 255 aaKnown RBP13.23□□□□□ -0.29
PSENEN-201ENST00000222266 SLC39A6Q13433 755 aa13.23□□□□□ -0.29
PSENEN-201ENST00000222266 WWC1Q8IX03 1113 aa13.23□□□□□ -0.29
PSENEN-201ENST00000222266 TFCP2L1Q9NZI6 479 aa13.23□□□□□ -0.29
PSENEN-201ENST00000222266 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
PSENEN-201ENST00000222266 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
PSENEN-201ENST00000222266 THUMPD2Q9BTF0 503 aaKnown RBP13.22□□□□□ -0.29
PSENEN-201ENST00000222266 SBF2Q86WG5 1849 aa13.22□□□□□ -0.29
PSENEN-201ENST00000222266 RC3H1Q5TC82 1133 aaKnown RBP13.21□□□□□ -0.29
PSENEN-201ENST00000222266 SCN11AQ9UI33 1791 aa13.21□□□□□ -0.29
PSENEN-201ENST00000222266 BTAF1O14981 1849 aa13.2□□□□□ -0.3
PSENEN-201ENST00000222266 RGPD3A6NKT7 1758 aaPredicted RBP13.2□□□□□ -0.3
PSENEN-201ENST00000222266 RGPD4Q7Z3J3 1758 aa13.2□□□□□ -0.3
PSENEN-201ENST00000222266 CHL1O00533 1208 aa13.2□□□□□ -0.3
PSENEN-201ENST00000222266 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
PSENEN-201ENST00000222266 SLC15A2Q16348 729 aa13.2□□□□□ -0.3
PSENEN-201ENST00000222266 ZNF496Q96IT1 587 aaPredicted RBP13.2□□□□□ -0.3
PSENEN-201ENST00000222266 RTCBQ9Y3I0 505 aaKnown RBP13.2□□□□□ -0.3
PSENEN-201ENST00000222266 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
PSENEN-201ENST00000222266 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
PSENEN-201ENST00000222266 SOS1Q07889 1333 aaPredicted RBP13.19□□□□□ -0.3
PSENEN-201ENST00000222266 MSH5O43196 834 aa13.19□□□□□ -0.3
PSENEN-201ENST00000222266 HNRNPUQ00839 825 aaKnown RBP eCLIP13.19□□□□□ -0.3
PSENEN-201ENST00000222266 PROM2Q8N271 834 aa13.19□□□□□ -0.3
PSENEN-201ENST00000222266 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
PSENEN-201ENST00000222266 ADAMTS7Q9UKP4 1686 aa13.18□□□□□ -0.3
PSENEN-201ENST00000222266 A0A087WZG4 1122 aa13.18□□□□□ -0.3
PSENEN-201ENST00000222266 E9PSI1 815 aa13.18□□□□□ -0.3
PSENEN-201ENST00000222266 HOXB7P09629 217 aa13.18□□□□□ -0.3
PSENEN-201ENST00000222266 ADRA2BP18089 450 aa13.18□□□□□ -0.3
PSENEN-201ENST00000222266 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
PSENEN-201ENST00000222266 ITGB4P16144 1822 aa13.18□□□□□ -0.3
PSENEN-201ENST00000222266 CNTNAP4Q9C0A0 1308 aa13.17□□□□□ -0.3
PSENEN-201ENST00000222266 TOGARAM1Q9Y4F4 1720 aa13.17□□□□□ -0.3
PSENEN-201ENST00000222266 GNPATO15228 680 aa13.17□□□□□ -0.3
PSENEN-201ENST00000222266 SSFA2P28290 1259 aa13.17□□□□□ -0.3
PSENEN-201ENST00000222266 EIF4A1P60842 406 aaKnown RBP13.17□□□□□ -0.3
PSENEN-201ENST00000222266 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
PSENEN-201ENST00000222266 CCDC87Q9NVE4 849 aa13.17□□□□□ -0.3
PSENEN-201ENST00000222266 CRKLP46109 303 aaKnown RBP13.16□□□□□ -0.3
PSENEN-201ENST00000222266 DNAJC10Q8IXB1 793 aa13.16□□□□□ -0.3
PSENEN-201ENST00000222266 SLC16A10Q8TF71 515 aa13.16□□□□□ -0.3
PSENEN-201ENST00000222266 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
PSENEN-201ENST00000222266 RPS6KA4O75676 772 aa13.15□□□□□ -0.3
PSENEN-201ENST00000222266 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
PSENEN-201ENST00000222266 CYP19A1P11511 503 aaPredicted RBP13.15□□□□□ -0.3
PSENEN-201ENST00000222266 RFC4P35249 363 aa13.15□□□□□ -0.3
PSENEN-201ENST00000222266 KCNQ4P56696 695 aa13.15□□□□□ -0.3
PSENEN-201ENST00000222266 ITPK1Q13572 414 aa13.15□□□□□ -0.3
PSENEN-201ENST00000222266 R3HDM1Q15032 1099 aaKnown RBP13.15□□□□□ -0.3
PSENEN-201ENST00000222266 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
PSENEN-201ENST00000222266 ERBB4Q15303 1308 aa13.14□□□□□ -0.31
PSENEN-201ENST00000222266 ZPR1O75312 459 aa13.14□□□□□ -0.31
PSENEN-201ENST00000222266 LINC00116Q8NCU8 138 aa13.14□□□□□ -0.31
PSENEN-201ENST00000222266 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
PSENEN-201ENST00000222266 ARXQ96QS3 562 aa13.14□□□□□ -0.31
PSENEN-201ENST00000222266 STK31Q9BXU1 1019 aa13.14□□□□□ -0.31
PSENEN-201ENST00000222266 KCNQ3O43525 872 aa13.13□□□□□ -0.31
PSENEN-201ENST00000222266 EIF2S2P20042 333 aaKnown RBP13.13□□□□□ -0.31
PSENEN-201ENST00000222266 CANXP27824 592 aaKnown RBP13.13□□□□□ -0.31
PSENEN-201ENST00000222266 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
PSENEN-201ENST00000222266 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
PSENEN-201ENST00000222266 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms