RNA–Protein interactions for RNA: ENST00000222256.8

RAB3A-201, Transcript of RAB3A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3A, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-201ENST00000222256 ZBED9Q6R2W3 1325 aa28.15■■■□□ 2.1
RAB3A-201ENST00000222256 YTHDC1Q96MU7 727 aaKnown RBP28.14■■■□□ 2.1
RAB3A-201ENST00000222256 TAF7Q15545 349 aaPredicted RBP28.13■■■□□ 2.09
RAB3A-201ENST00000222256 IL16Q14005 1332 aa28.13■■■□□ 2.09
RAB3A-201ENST00000222256 KCNQ2O43526 872 aa28.13■■■□□ 2.09
RAB3A-201ENST00000222256 PIGBQ92521 554 aa28.11■■■□□ 2.09
RAB3A-201ENST00000222256 GOLGA2Q08379 1002 aa28.09■■■□□ 2.09
RAB3A-201ENST00000222256 CFAP44Q96MT7 982 aa28.09■■■□□ 2.09
RAB3A-201ENST00000222256 BCL11BQ9C0K0 894 aaPredicted RBP28.09■■■□□ 2.09
RAB3A-201ENST00000222256 IFT57Q9NWB7 429 aa28.09■■■□□ 2.09
RAB3A-201ENST00000222256 BABAM1Q9NWV8 329 aa28.09■■■□□ 2.09
RAB3A-201ENST00000222256 BTBD11A6QL63 1104 aa28.08■■■□□ 2.09
RAB3A-201ENST00000222256 GNAI1P63096 354 aa28.08■■■□□ 2.09
RAB3A-201ENST00000222256 TRIM37O94972 964 aa28.08■■■□□ 2.08
RAB3A-201ENST00000222256 ZNF853P0CG23 659 aa28.08■■■□□ 2.08
RAB3A-201ENST00000222256 CHL1O00533 1208 aa28.07■■■□□ 2.08
RAB3A-201ENST00000222256 LAS1LQ9Y4W2 734 aaKnown RBP28.07■■■□□ 2.08
RAB3A-201ENST00000222256 BTAF1O14981 1849 aa28.06■■■□□ 2.08
RAB3A-201ENST00000222256 PTF1AQ7RTS3 328 aa28.06■■■□□ 2.08
RAB3A-201ENST00000222256 MIS18AQ9NYP9 233 aa28.05■■■□□ 2.08
RAB3A-201ENST00000222256 TSPYL4Q9UJ04 414 aa28.04■■■□□ 2.08
RAB3A-201ENST00000222256 KDM3BQ7LBC6 1761 aa28.04■■■□□ 2.08
RAB3A-201ENST00000222256 PAPPAQ13219 1627 aa28.04■■■□□ 2.08
RAB3A-201ENST00000222256 SPINK5Q9NQ38 1064 aaPredicted RBP28.03■■■□□ 2.08
RAB3A-201ENST00000222256 E9PSI1 815 aa28.02■■■□□ 2.08
RAB3A-201ENST00000222256 ZNF790Q6PG37 636 aa28.02■■■□□ 2.08
RAB3A-201ENST00000222256 ATG3Q9NT62 314 aa28.02■■■□□ 2.08
RAB3A-201ENST00000222256 SLC39A6Q13433 755 aa28.02■■■□□ 2.08
RAB3A-201ENST00000222256 MYH16Q9H6N6 1097 aa28.02■■■□□ 2.08
RAB3A-201ENST00000222256 MBIPQ9NS73 344 aa28.02■■■□□ 2.08
RAB3A-201ENST00000222256 ASAP1Q9ULH1 1129 aa28.02■■■□□ 2.08
RAB3A-201ENST00000222256 SLFN5Q08AF3 891 aa28.01■■■□□ 2.07
RAB3A-201ENST00000222256 TTC5Q8N0Z6 440 aa28.01■■■□□ 2.07
RAB3A-201ENST00000222256 CDCA7LQ96GN5 454 aa28.01■■■□□ 2.07
RAB3A-201ENST00000222256 SMARCC1Q92922 1105 aaPredicted RBP27.99■■■□□ 2.07
RAB3A-201ENST00000222256 TNS1Q9HBL0 1735 aaKnown RBP27.99■■■□□ 2.07
RAB3A-201ENST00000222256 KCNQ3O43525 872 aa27.98■■■□□ 2.07
RAB3A-201ENST00000222256 UBR2Q8IWV8 1755 aa27.98■■■□□ 2.07
RAB3A-201ENST00000222256 TSR2Q969E8 191 aaKnown RBP27.97■■■□□ 2.07
RAB3A-201ENST00000222256 FANCIQ9NVI1 1328 aa27.97■■■□□ 2.07
RAB3A-201ENST00000222256 ILDR2Q71H61 639 aa27.97■■■□□ 2.07
RAB3A-201ENST00000222256 TRMT2AQ8IZ69 625 aaKnown RBP27.97■■■□□ 2.07
RAB3A-201ENST00000222256 PALLDQ8WX93 1383 aa27.96■■■□□ 2.07
RAB3A-201ENST00000222256 KCPQ6ZWJ8 1503 aa27.95■■■□□ 2.07
RAB3A-201ENST00000222256 EIF4A1P60842 406 aaKnown RBP27.95■■■□□ 2.06
RAB3A-201ENST00000222256 APBA3O96018 575 aa27.93■■■□□ 2.06
RAB3A-201ENST00000222256 ZNF496Q96IT1 587 aaPredicted RBP27.93■■■□□ 2.06
RAB3A-201ENST00000222256 FMNL2Q96PY5 1086 aa27.93■■■□□ 2.06
RAB3A-201ENST00000222256 PTCD1O75127 700 aaKnown RBP27.92■■■□□ 2.06
RAB3A-201ENST00000222256 DUSP27Q5VZP5 1158 aa27.92■■■□□ 2.06
RAB3A-201ENST00000222256 CCDC125Q86Z20 511 aa27.92■■■□□ 2.06
RAB3A-201ENST00000222256 LY75O60449 1722 aa27.92■■■□□ 2.06
RAB3A-201ENST00000222256 PLSCR1O15162 318 aa27.91■■■□□ 2.06
RAB3A-201ENST00000222256 SF3B2Q13435 895 aaKnown RBP27.91■■■□□ 2.06
RAB3A-201ENST00000222256 HEG1Q9ULI3 1381 aa27.9■■■□□ 2.06
RAB3A-201ENST00000222256 RBM42Q9BTD8 480 aaKnown RBP27.9■■■□□ 2.06
RAB3A-201ENST00000222256 LOC102724428A0A0B4J2F2 783 aa27.89■■■□□ 2.06
RAB3A-201ENST00000222256 SIK1P57059 783 aa27.89■■■□□ 2.06
RAB3A-201ENST00000222256 RGPD3A6NKT7 1758 aaPredicted RBP27.88■■■□□ 2.05
RAB3A-201ENST00000222256 RGPD4Q7Z3J3 1758 aa27.88■■■□□ 2.05
RAB3A-201ENST00000222256 VSIG10Q8N0Z9 540 aa27.88■■■□□ 2.05
RAB3A-201ENST00000222256 ZNF831Q5JPB2 1677 aa27.87■■■□□ 2.05
RAB3A-201ENST00000222256 EXOSC9Q06265 439 aaKnown RBP27.87■■■□□ 2.05
RAB3A-201ENST00000222256 GIGYF1O75420 1035 aaPredicted RBP27.87■■■□□ 2.05
RAB3A-201ENST00000222256 SNRPA1P09661 255 aaKnown RBP27.87■■■□□ 2.05
RAB3A-201ENST00000222256 KRT24Q2M2I5 525 aa27.87■■■□□ 2.05
RAB3A-201ENST00000222256 C8orf58Q8NAV2 365 aa27.87■■■□□ 2.05
RAB3A-201ENST00000222256 SLC4A9Q96Q91 983 aa27.86■■■□□ 2.05
RAB3A-201ENST00000222256 BAG6P46379 1132 aa27.84■■■□□ 2.05
RAB3A-201ENST00000222256 UPF1Q92900 1129 aaKnown RBP eCLIP27.84■■■□□ 2.05
RAB3A-201ENST00000222256 CICQ96RK0 1608 aaPredicted RBP27.84■■■□□ 2.05
RAB3A-201ENST00000222256 SOS1Q07889 1333 aaPredicted RBP27.84■■■□□ 2.05
RAB3A-201ENST00000222256 HOXB7P09629 217 aa27.83■■■□□ 2.05
RAB3A-201ENST00000222256 ATP6V1AP38606 617 aa27.83■■■□□ 2.05
RAB3A-201ENST00000222256 CCNL1Q9UK58 526 aaPredicted RBP27.83■■■□□ 2.05
RAB3A-201ENST00000222256 SLC27A3Q5K4L6 730 aa27.82■■■□□ 2.04
RAB3A-201ENST00000222256 TSPYL6Q8N831 410 aa27.82■■■□□ 2.04
RAB3A-201ENST00000222256 TEX13AQ9BXU3 409 aaPredicted RBP27.82■■■□□ 2.04
RAB3A-201ENST00000222256 C5P01031 1676 aa27.82■■■□□ 2.04
RAB3A-201ENST00000222256 TJP1Q07157 1748 aa27.82■■■□□ 2.04
RAB3A-201ENST00000222256 ELL2O00472 640 aaPredicted RBP27.82■■■□□ 2.04
RAB3A-201ENST00000222256 TXNRD1Q16881 649 aa27.82■■■□□ 2.04
RAB3A-201ENST00000222256 TWISTNBQ3B726 338 aaPredicted RBP27.82■■■□□ 2.04
RAB3A-201ENST00000222256 LAMB4A4D0S4 1761 aa27.8■■■□□ 2.04
RAB3A-201ENST00000222256 PRAMEF22A3QJZ6 481 aa27.8■■■□□ 2.04
RAB3A-201ENST00000222256 EN1Q05925 392 aaPredicted RBP27.8■■■□□ 2.04
RAB3A-201ENST00000222256 DNAJC10Q8IXB1 793 aa27.8■■■□□ 2.04
RAB3A-201ENST00000222256 PROM2Q8N271 834 aa27.8■■■□□ 2.04
RAB3A-201ENST00000222256 CAMKK2Q96RR4 588 aa27.8■■■□□ 2.04
RAB3A-201ENST00000222256 ITPK1Q13572 414 aa27.79■■■□□ 2.04
RAB3A-201ENST00000222256 CT47B1P0C2W7 299 aaPredicted RBP27.78■■■□□ 2.04
RAB3A-201ENST00000222256 DEFB132Q7Z7B7 95 aa27.78■■■□□ 2.04
RAB3A-201ENST00000222256 USP16Q9Y5T5 823 aa27.78■■■□□ 2.04
RAB3A-201ENST00000222256 TAF1LQ8IZX4 1826 aa27.78■■■□□ 2.04
RAB3A-201ENST00000222256 VAMP4O75379 141 aa27.77■■■□□ 2.04
RAB3A-201ENST00000222256 HMGB2P26583 209 aaKnown RBP27.77■■■□□ 2.04
RAB3A-201ENST00000222256 KCNQ4P56696 695 aa27.77■■■□□ 2.04
RAB3A-201ENST00000222256 LRRC4BQ9NT99 713 aa27.77■■■□□ 2.04
RAB3A-201ENST00000222256 STARD3NLO95772 234 aa27.77■■■□□ 2.04
RAB3A-201ENST00000222256 CHMP4AQ9BY43 222 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms