RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 WWC1Q8IX03 1113 aa25.52■■□□□ 1.68
SNAPC2-201ENST00000221573 PIGBQ92521 554 aa25.52■■□□□ 1.68
SNAPC2-201ENST00000221573 HNRNPUQ00839 825 aaKnown RBP eCLIP25.51■■□□□ 1.67
SNAPC2-201ENST00000221573 NCBP3Q53F19 620 aaKnown RBP25.51■■□□□ 1.67
SNAPC2-201ENST00000221573 BCL11BQ9C0K0 894 aaPredicted RBP25.51■■□□□ 1.67
SNAPC2-201ENST00000221573 KDM3BQ7LBC6 1761 aa25.5■■□□□ 1.67
SNAPC2-201ENST00000221573 NGEFQ8N5V2 710 aa25.47■■□□□ 1.67
SNAPC2-201ENST00000221573 UBR2Q8IWV8 1755 aa25.47■■□□□ 1.67
SNAPC2-201ENST00000221573 ZNF521Q96K83 1311 aa25.46■■□□□ 1.67
SNAPC2-201ENST00000221573 TAF7Q15545 349 aaPredicted RBP25.45■■□□□ 1.66
SNAPC2-201ENST00000221573 ASAP1Q9ULH1 1129 aa25.45■■□□□ 1.66
SNAPC2-201ENST00000221573 LY75O60449 1722 aa25.45■■□□□ 1.66
SNAPC2-201ENST00000221573 SLC39A6Q13433 755 aa25.44■■□□□ 1.66
SNAPC2-201ENST00000221573 MIS18AQ9NYP9 233 aa25.44■■□□□ 1.66
SNAPC2-201ENST00000221573 BTBD11A6QL63 1104 aa25.43■■□□□ 1.66
SNAPC2-201ENST00000221573 ATG3Q9NT62 314 aa25.43■■□□□ 1.66
SNAPC2-201ENST00000221573 LAS1LQ9Y4W2 734 aaKnown RBP25.42■■□□□ 1.66
SNAPC2-201ENST00000221573 RGPD3A6NKT7 1758 aaPredicted RBP25.42■■□□□ 1.66
SNAPC2-201ENST00000221573 RGPD4Q7Z3J3 1758 aa25.42■■□□□ 1.66
SNAPC2-201ENST00000221573 APBA3O96018 575 aa25.42■■□□□ 1.66
SNAPC2-201ENST00000221573 KCPQ6ZWJ8 1503 aa25.42■■□□□ 1.66
SNAPC2-201ENST00000221573 KCNQ3O43525 872 aa25.41■■□□□ 1.66
SNAPC2-201ENST00000221573 CALD1Q05682 793 aaKnown RBP25.41■■□□□ 1.66
SNAPC2-201ENST00000221573 WDR63Q8IWG1 891 aa25.41■■□□□ 1.66
SNAPC2-201ENST00000221573 UPF1Q92900 1129 aaKnown RBP eCLIP25.41■■□□□ 1.664e-7■■■■■ 29
SNAPC2-201ENST00000221573 PALLDQ8WX93 1383 aa25.41■■□□□ 1.66
SNAPC2-201ENST00000221573 YTHDC1Q96MU7 727 aaKnown RBP25.4■■□□□ 1.66
SNAPC2-201ENST00000221573 ZNF790Q6PG37 636 aa25.39■■□□□ 1.66
SNAPC2-201ENST00000221573 CFAP44Q96MT7 982 aa25.39■■□□□ 1.66
SNAPC2-201ENST00000221573 IFT57Q9NWB7 429 aa25.39■■□□□ 1.66
SNAPC2-201ENST00000221573 TSPYL4Q9UJ04 414 aa25.39■■□□□ 1.66
SNAPC2-201ENST00000221573 ZNF853P0CG23 659 aa25.38■■□□□ 1.65
SNAPC2-201ENST00000221573 SF3B2Q13435 895 aaKnown RBP25.38■■□□□ 1.65
SNAPC2-201ENST00000221573 SPINK5Q9NQ38 1064 aaPredicted RBP25.38■■□□□ 1.65
SNAPC2-201ENST00000221573 CHL1O00533 1208 aa25.37■■□□□ 1.65
SNAPC2-201ENST00000221573 IL16Q14005 1332 aa25.37■■□□□ 1.65
SNAPC2-201ENST00000221573 ZBED9Q6R2W3 1325 aa25.37■■□□□ 1.65
SNAPC2-201ENST00000221573 GNAI1P63096 354 aa25.37■■□□□ 1.65
SNAPC2-201ENST00000221573 TTC5Q8N0Z6 440 aa25.37■■□□□ 1.65
SNAPC2-201ENST00000221573 SMARCC1Q92922 1105 aaPredicted RBP25.37■■□□□ 1.65
SNAPC2-201ENST00000221573 PTCD1O75127 700 aaKnown RBP25.36■■□□□ 1.65
SNAPC2-201ENST00000221573 CCDC125Q86Z20 511 aa25.36■■□□□ 1.65
SNAPC2-201ENST00000221573 MBIPQ9NS73 344 aa25.36■■□□□ 1.65
SNAPC2-201ENST00000221573 TJP1Q07157 1748 aa25.36■■□□□ 1.65
SNAPC2-201ENST00000221573 DEFB132Q7Z7B7 95 aa25.35■■□□□ 1.65
SNAPC2-201ENST00000221573 TSR2Q969E8 191 aaKnown RBP25.35■■□□□ 1.65
SNAPC2-201ENST00000221573 BABAM1Q9NWV8 329 aa25.35■■□□□ 1.65
SNAPC2-201ENST00000221573 C5P01031 1676 aa25.35■■□□□ 1.65
SNAPC2-201ENST00000221573 TAF1LQ8IZX4 1826 aa25.34■■□□□ 1.65
SNAPC2-201ENST00000221573 ZNF831Q5JPB2 1677 aa25.34■■□□□ 1.65
SNAPC2-201ENST00000221573 RREB1Q92766 1687 aa25.34■■□□□ 1.65
SNAPC2-201ENST00000221573 PLSCR1O15162 318 aa25.34■■□□□ 1.65
SNAPC2-201ENST00000221573 GOLGA2Q08379 1002 aa25.34■■□□□ 1.65
SNAPC2-201ENST00000221573 RBM42Q9BTD8 480 aaKnown RBP25.34■■□□□ 1.65
SNAPC2-201ENST00000221573 EN1Q05925 392 aaPredicted RBP25.33■■□□□ 1.65
SNAPC2-201ENST00000221573 CDCA7LQ96GN5 454 aa25.33■■□□□ 1.65
SNAPC2-201ENST00000221573 ZNF496Q96IT1 587 aaPredicted RBP25.33■■□□□ 1.65
SNAPC2-201ENST00000221573 CICQ96RK0 1608 aaPredicted RBP25.33■■□□□ 1.65
SNAPC2-201ENST00000221573 BAG6P46379 1132 aa25.32■■□□□ 1.64
SNAPC2-201ENST00000221573 SLC4A9Q96Q91 983 aa25.32■■□□□ 1.64
SNAPC2-201ENST00000221573 FANCIQ9NVI1 1328 aa25.31■■□□□ 1.64
SNAPC2-201ENST00000221573 LOC102724428A0A0B4J2F2 783 aa25.31■■□□□ 1.64
SNAPC2-201ENST00000221573 KCNQ4P56696 695 aa25.31■■□□□ 1.64
SNAPC2-201ENST00000221573 SIK1P57059 783 aa25.31■■□□□ 1.64
SNAPC2-201ENST00000221573 EIF4A1P60842 406 aaKnown RBP25.31■■□□□ 1.64
SNAPC2-201ENST00000221573 COL5A3P25940 1745 aaPredicted RBP25.31■■□□□ 1.64
SNAPC2-201ENST00000221573 EZH2Q15910 746 aaKnown RBP25.3■■□□□ 1.64
SNAPC2-201ENST00000221573 NUP188Q5SRE5 1749 aa25.3■■□□□ 1.64
SNAPC2-201ENST00000221573 PROM2Q8N271 834 aa25.3■■□□□ 1.64
SNAPC2-201ENST00000221573 FMNL2Q96PY5 1086 aa25.3■■□□□ 1.64
SNAPC2-201ENST00000221573 CAMKK2Q96RR4 588 aa25.3■■□□□ 1.64
SNAPC2-201ENST00000221573 HEG1Q9ULI3 1381 aa25.3■■□□□ 1.64
SNAPC2-201ENST00000221573 LAMB4A4D0S4 1761 aa25.3■■□□□ 1.64
SNAPC2-201ENST00000221573 TXNRD1Q16881 649 aa25.29■■□□□ 1.64
SNAPC2-201ENST00000221573 KRT24Q2M2I5 525 aa25.29■■□□□ 1.64
SNAPC2-201ENST00000221573 SLFN5Q08AF3 891 aa25.28■■□□□ 1.64
SNAPC2-201ENST00000221573 LRRC4BQ9NT99 713 aa25.28■■□□□ 1.64
SNAPC2-201ENST00000221573 CCNL1Q9UK58 526 aaPredicted RBP25.28■■□□□ 1.64
SNAPC2-201ENST00000221573 E9PSI1 815 aa25.27■■□□□ 1.64
SNAPC2-201ENST00000221573 MYH16Q9H6N6 1097 aa25.27■■□□□ 1.64
SNAPC2-201ENST00000221573 PRAMEF22A3QJZ6 481 aa25.27■■□□□ 1.64
SNAPC2-201ENST00000221573 ATP6V1AP38606 617 aa25.27■■□□□ 1.64
SNAPC2-201ENST00000221573 ITPK1Q13572 414 aa25.26■■□□□ 1.63
SNAPC2-201ENST00000221573 SLC27A3Q5K4L6 730 aa25.24■■□□□ 1.63
SNAPC2-201ENST00000221573 DNAJC10Q8IXB1 793 aa25.24■■□□□ 1.63
SNAPC2-201ENST00000221573 VSIG10Q8N0Z9 540 aa25.24■■□□□ 1.63
SNAPC2-201ENST00000221573 MYH14Q7Z406 1995 aaKnown RBP25.23■■□□□ 1.63
SNAPC2-201ENST00000221573 TRMT2AQ8IZ69 625 aaKnown RBP25.23■■□□□ 1.63
SNAPC2-201ENST00000221573 C4BP0C0L5 1744 aa25.23■■□□□ 1.63
SNAPC2-201ENST00000221573 GIGYF1O75420 1035 aaPredicted RBP25.22■■□□□ 1.63
SNAPC2-201ENST00000221573 C8orf58Q8NAV2 365 aa25.22■■□□□ 1.63
SNAPC2-201ENST00000221573 SNRPA1P09661 255 aaKnown RBP25.22■■□□□ 1.63
SNAPC2-201ENST00000221573 EXOSC9Q06265 439 aaKnown RBP25.22■■□□□ 1.63
SNAPC2-201ENST00000221573 DUSP27Q5VZP5 1158 aa25.22■■□□□ 1.63
SNAPC2-201ENST00000221573 LINC00116Q8NCU8 138 aa25.22■■□□□ 1.63
SNAPC2-201ENST00000221573 ELL2O00472 640 aaPredicted RBP25.21■■□□□ 1.63
SNAPC2-201ENST00000221573 TSPYL6Q8N831 410 aa25.21■■□□□ 1.63
SNAPC2-201ENST00000221573 USP16Q9Y5T5 823 aa25.2■■□□□ 1.62
SNAPC2-201ENST00000221573 TUBGCP6Q96RT7 1819 aa25.19■■□□□ 1.62
SNAPC2-201ENST00000221573 SOCS7O14512 581 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms