RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 IL1RAPL2Q9NP60 686 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 PDRG1Q9NUG6 133 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 CWC27Q6UX04 472 aaKnown RBP12.35□□□□□ -0.43
TRPS1-201ENST00000220888 TMEM266Q2M3C6 531 aa12.35□□□□□ -0.43
TRPS1-201ENST00000220888 TNMDQ9H2S6 317 aa12.35□□□□□ -0.43
TRPS1-201ENST00000220888 TSPY26PQ9H489 355 aa12.35□□□□□ -0.43
TRPS1-201ENST00000220888 HDAC9Q9UKV0 1011 aa12.35□□□□□ -0.43
TRPS1-201ENST00000220888 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
TRPS1-201ENST00000220888 ANKRD30BQ9BXX2 1392 aa12.35□□□□□ -0.43
TRPS1-201ENST00000220888 FCHSD2O94868 740 aa12.35□□□□□ -0.43
TRPS1-201ENST00000220888 ZSCAN31Q96LW9 406 aaPredicted RBP12.35□□□□□ -0.43
TRPS1-201ENST00000220888 JAKMIP1Q96N16 626 aaKnown RBP12.35□□□□□ -0.43
TRPS1-201ENST00000220888 TSPYL1Q9H0U9 437 aa12.35□□□□□ -0.43
TRPS1-201ENST00000220888 PDZRN3Q9UPQ7 1066 aa12.35□□□□□ -0.43
TRPS1-201ENST00000220888 MAP3K9P80192 1104 aa12.34□□□□□ -0.43
TRPS1-201ENST00000220888 TSG101Q99816 390 aa12.34□□□□□ -0.43
TRPS1-201ENST00000220888 CADPS2Q86UW7 1296 aa12.34□□□□□ -0.43
TRPS1-201ENST00000220888 CFAP45Q9UL16 551 aa12.34□□□□□ -0.43
TRPS1-201ENST00000220888 PPP1R42Q7Z4L9 355 aa12.34□□□□□ -0.43
TRPS1-201ENST00000220888 WDR33Q9C0J8 1336 aaKnown RBP12.34□□□□□ -0.43
TRPS1-201ENST00000220888 PRPF40AO75400 957 aaKnown RBP12.34□□□□□ -0.43
TRPS1-201ENST00000220888 BAG3O95817 575 aa12.34□□□□□ -0.43
TRPS1-201ENST00000220888 RNF41Q9H4P4 317 aaPredicted RBP12.34□□□□□ -0.43
TRPS1-201ENST00000220888 CCDC192P0DO97 292 aa12.34□□□□□ -0.43
TRPS1-201ENST00000220888 NBPF1Q3BBV0 1214 aa12.34□□□□□ -0.43
TRPS1-201ENST00000220888 CAVIN1Q6NZI2 390 aaKnown RBP12.34□□□□□ -0.43
TRPS1-201ENST00000220888 KRT28Q7Z3Y7 464 aa12.34□□□□□ -0.43
TRPS1-201ENST00000220888 COMMD10Q9Y6G5 202 aa12.34□□□□□ -0.43
TRPS1-201ENST00000220888 BAG4O95429 457 aaKnown RBP12.33□□□□□ -0.44
TRPS1-201ENST00000220888 GPTP24298 496 aa12.33□□□□□ -0.44
TRPS1-201ENST00000220888 AMOTL2Q9Y2J4 779 aa12.33□□□□□ -0.44
TRPS1-201ENST00000220888 WDR63Q8IWG1 891 aa12.33□□□□□ -0.44
TRPS1-201ENST00000220888 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
TRPS1-201ENST00000220888 C9orf84Q5VXU9 1444 aa12.33□□□□□ -0.44
TRPS1-201ENST00000220888 ZNF397Q8NF99 534 aaPredicted RBP12.33□□□□□ -0.44
TRPS1-201ENST00000220888 NCOA2Q15596 1464 aa12.33□□□□□ -0.44
TRPS1-201ENST00000220888 PABPN1LA6NDY0 278 aaKnown RBP12.32□□□□□ -0.44
TRPS1-201ENST00000220888 KIF20AO95235 890 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 NASPP49321 788 aaPredicted RBP12.32□□□□□ -0.44
TRPS1-201ENST00000220888 PDE3AQ14432 1141 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 NFE2L2Q16236 605 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 SPTY2D1Q68D10 685 aaPredicted RBP12.32□□□□□ -0.44
TRPS1-201ENST00000220888 OGFOD1Q8N543 542 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 MRC2Q9UBG0 1479 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 NBPF6Q5VWK0 638 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 IQCEQ6IPM2 695 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 NBPF5PQ86XG9 351 aaPredicted RBP12.32□□□□□ -0.44
TRPS1-201ENST00000220888 USHBP1Q8N6Y0 703 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 FERMT2Q96AC1 680 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 NBPF4Q96M43 638 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 TAF7Q15545 349 aaPredicted RBP12.32□□□□□ -0.44
TRPS1-201ENST00000220888 NFKBIBQ15653 356 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 SPATA32Q96LK8 384 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 IFT140Q96RY7 1462 aa12.32□□□□□ -0.44
TRPS1-201ENST00000220888 DUSP27Q5VZP5 1158 aa12.31□□□□□ -0.44
TRPS1-201ENST00000220888 CCDC194A0A1B0GVG4 234 aa12.31□□□□□ -0.44
TRPS1-201ENST00000220888 VPS36Q86VN1 386 aa12.31□□□□□ -0.44
TRPS1-201ENST00000220888 CENPHQ9H3R5 247 aa12.31□□□□□ -0.44
TRPS1-201ENST00000220888 PHAXQ9H814 394 aaKnown RBP12.31□□□□□ -0.44
TRPS1-201ENST00000220888 RPAP2Q8IXW5 612 aaPredicted RBP12.31□□□□□ -0.44
TRPS1-201ENST00000220888 KIF1BPQ96EK5 621 aa12.31□□□□□ -0.44
TRPS1-201ENST00000220888 GRIPAP1Q4V328 841 aa12.31□□□□□ -0.44
TRPS1-201ENST00000220888 TSHZ2Q9NRE2 1034 aa12.31□□□□□ -0.44
TRPS1-201ENST00000220888 GOLGA6L7A0A1B0GV03 622 aa12.31□□□□□ -0.44
TRPS1-201ENST00000220888 FAM43AQ8N2R8 423 aa12.31□□□□□ -0.44
TRPS1-201ENST00000220888 SAMM50Q9Y512 469 aa12.31□□□□□ -0.44
TRPS1-201ENST00000220888 TRMT1LQ7Z2T5 733 aaKnown RBP12.3□□□□□ -0.44
TRPS1-201ENST00000220888 WAPLQ7Z5K2 1190 aa12.3□□□□□ -0.44
TRPS1-201ENST00000220888 KIAA1328Q86T90 577 aa12.3□□□□□ -0.44
TRPS1-201ENST00000220888 CETN1Q12798 172 aa12.3□□□□□ -0.44
TRPS1-201ENST00000220888 CCDC12Q8WUD4 166 aaPredicted RBP12.3□□□□□ -0.44
TRPS1-201ENST00000220888 MIS18AQ9NYP9 233 aa12.3□□□□□ -0.44
TRPS1-201ENST00000220888 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
TRPS1-201ENST00000220888 C8orf37Q96NL8 207 aa12.3□□□□□ -0.44
TRPS1-201ENST00000220888 ZBTB3Q9H5J0 574 aa12.3□□□□□ -0.44
TRPS1-201ENST00000220888 BIN2Q9UBW5 565 aaPredicted RBP12.3□□□□□ -0.44
TRPS1-201ENST00000220888 FKBP15Q5T1M5 1219 aa12.3□□□□□ -0.44
TRPS1-201ENST00000220888 RSPH6AQ9H0K4 717 aa12.3□□□□□ -0.44
TRPS1-201ENST00000220888 LRRFIP2Q9Y608 721 aaKnown RBP12.3□□□□□ -0.44
TRPS1-201ENST00000220888 CEBPAP49715 358 aaPredicted RBP12.29□□□□□ -0.44
TRPS1-201ENST00000220888 IFNL2Q8IZJ0 200 aa12.29□□□□□ -0.44
TRPS1-201ENST00000220888 MSH6P52701 1360 aa12.29□□□□□ -0.44
TRPS1-201ENST00000220888 TTC21AQ8NDW8 1320 aa12.29□□□□□ -0.44
TRPS1-201ENST00000220888 GLRX3O76003 335 aaKnown RBP12.29□□□□□ -0.44
TRPS1-201ENST00000220888 CWC15Q9P013 229 aaKnown RBP12.29□□□□□ -0.44
TRPS1-201ENST00000220888 SLC12A7Q9Y666 1083 aa12.29□□□□□ -0.44
TRPS1-201ENST00000220888 FGFR1OPO95684 399 aaKnown RBP12.29□□□□□ -0.44
TRPS1-201ENST00000220888 CATIPQ7Z7H3 387 aa12.29□□□□□ -0.44
TRPS1-201ENST00000220888 HYPKQ9NX55 129 aa12.29□□□□□ -0.44
TRPS1-201ENST00000220888 RAB11FIP3O75154 756 aa12.29□□□□□ -0.44
TRPS1-201ENST00000220888 GSTO1P78417 241 aa12.29□□□□□ -0.44
TRPS1-201ENST00000220888 MCM10Q7L590 875 aa12.29□□□□□ -0.44
TRPS1-201ENST00000220888 JDP2Q8WYK2 163 aa12.29□□□□□ -0.44
TRPS1-201ENST00000220888 PDIA4P13667 645 aaKnown RBP12.28□□□□□ -0.44
TRPS1-201ENST00000220888 NLRP5P59047 1200 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 STXBP4Q6ZWJ1 553 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 CCDC91Q7Z6B0 441 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 DDX11Q96FC9 970 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 CASKIN1Q8WXD9 1431 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms