RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 FOXD4L3Q6VB84 417 aaPredicted RBP19.52■□□□□ 0.72
SNAPC1-201ENST00000216294 TRIM44Q96DX7 344 aaPredicted RBP19.52■□□□□ 0.72
SNAPC1-201ENST00000216294 MARF1Q9Y4F3 1742 aaKnown RBP19.51■□□□□ 0.71
SNAPC1-201ENST00000216294 ARHGEF10O15013 1369 aa19.51■□□□□ 0.71
SNAPC1-201ENST00000216294 EYA1Q99502 592 aa19.51■□□□□ 0.71
SNAPC1-201ENST00000216294 TPRNQ4KMQ1 711 aa19.5■□□□□ 0.71
SNAPC1-201ENST00000216294 INTS3Q68E01 1043 aaKnown RBP19.5■□□□□ 0.71
SNAPC1-201ENST00000216294 RTL1A6NKG5 1358 aa19.5■□□□□ 0.71
SNAPC1-201ENST00000216294 DTNBO60941 627 aa19.49■□□□□ 0.71
SNAPC1-201ENST00000216294 HOXC9P31274 260 aa19.49■□□□□ 0.71
SNAPC1-201ENST00000216294 ORAI2Q96SN7 254 aa19.49■□□□□ 0.71
SNAPC1-201ENST00000216294 CHMP4BQ9H444 224 aaKnown RBP19.49■□□□□ 0.71
SNAPC1-201ENST00000216294 NSFL1CQ9UNZ2 370 aaKnown RBP19.49■□□□□ 0.71
SNAPC1-201ENST00000216294 PRPF40AO75400 957 aaKnown RBP19.48■□□□□ 0.71
SNAPC1-201ENST00000216294 PSME1Q06323 249 aa19.48■□□□□ 0.71
SNAPC1-201ENST00000216294 LTV1Q96GA3 475 aaPredicted RBP19.48■□□□□ 0.71
SNAPC1-201ENST00000216294 CHL1O00533 1208 aa19.48■□□□□ 0.71
SNAPC1-201ENST00000216294 XPCQ01831 940 aaPredicted RBP19.48■□□□□ 0.71
SNAPC1-201ENST00000216294 NASPP49321 788 aaPredicted RBP19.48■□□□□ 0.71
SNAPC1-201ENST00000216294 IGSF1Q8N6C5 1336 aa19.47■□□□□ 0.71
SNAPC1-201ENST00000216294 PLEKHG5O94827 1062 aa19.47■□□□□ 0.71
SNAPC1-201ENST00000216294 RABEP1Q15276 862 aa19.47■□□□□ 0.71
SNAPC1-201ENST00000216294 MTHFSDQ2M296 383 aaKnown RBP19.47■□□□□ 0.71
SNAPC1-201ENST00000216294 ZDHHC9Q9Y397 364 aa19.47■□□□□ 0.71
SNAPC1-201ENST00000216294 PROSER2Q86WR7 435 aaPredicted RBP19.46■□□□□ 0.71
SNAPC1-201ENST00000216294 KDRP35968 1356 aa19.46■□□□□ 0.71
SNAPC1-201ENST00000216294 SKOR2Q2VWA4 1001 aaPredicted RBP19.45■□□□□ 0.7
SNAPC1-201ENST00000216294 LMBRD1Q9NUN5 540 aa19.45■□□□□ 0.7
SNAPC1-201ENST00000216294 NWD1Q149M9 1564 aa19.44■□□□□ 0.7
SNAPC1-201ENST00000216294 GOLGA6L22H0YM25 854 aa19.44■□□□□ 0.7
SNAPC1-201ENST00000216294 PALD1Q9ULE6 856 aa19.44■□□□□ 0.7
SNAPC1-201ENST00000216294 ZBTB7CA1YPR0 619 aa19.44■□□□□ 0.7
SNAPC1-201ENST00000216294 GPT2Q8TD30 523 aa19.44■□□□□ 0.7
SNAPC1-201ENST00000216294 TSPYL4Q9UJ04 414 aa19.44■□□□□ 0.7
SNAPC1-201ENST00000216294 USP54Q70EL1 1684 aa19.44■□□□□ 0.7
SNAPC1-201ENST00000216294 KLHL40Q2TBA0 621 aa19.43■□□□□ 0.7
SNAPC1-201ENST00000216294 ZSCAN23Q3MJ62 389 aa19.43■□□□□ 0.7
SNAPC1-201ENST00000216294 RPAP2Q8IXW5 612 aaPredicted RBP19.43■□□□□ 0.7
SNAPC1-201ENST00000216294 RBSNQ9H1K0 784 aa19.43■□□□□ 0.7
SNAPC1-201ENST00000216294 PNMA6EA0A0J9YXQ4 647 aa19.42■□□□□ 0.7
SNAPC1-201ENST00000216294 MAP4K4O95819 1239 aaPredicted RBP19.42■□□□□ 0.7
SNAPC1-201ENST00000216294 NEK4P51957 841 aa19.42■□□□□ 0.7
SNAPC1-201ENST00000216294 USHBP1Q8N6Y0 703 aa19.42■□□□□ 0.7
SNAPC1-201ENST00000216294 PRIM1P49642 420 aaKnown RBP19.42■□□□□ 0.7
SNAPC1-201ENST00000216294 RILPL2Q969X0 211 aa19.42■□□□□ 0.7
SNAPC1-201ENST00000216294 PDE1AP54750 535 aa19.41■□□□□ 0.7
SNAPC1-201ENST00000216294 UNC5CLQ8IV45 518 aa19.41■□□□□ 0.7
SNAPC1-201ENST00000216294 CRB1P82279 1406 aa19.41■□□□□ 0.7
SNAPC1-201ENST00000216294 KIF24Q5T7B8 1368 aa19.41■□□□□ 0.7
SNAPC1-201ENST00000216294 LARP6Q9BRS8 491 aaKnown RBP19.4■□□□□ 0.7
SNAPC1-201ENST00000216294 CYP2E1P05181 493 aaPredicted RBP19.4■□□□□ 0.7
SNAPC1-201ENST00000216294 IL25Q9H293 177 aa19.4■□□□□ 0.7
SNAPC1-201ENST00000216294 NFAT5O94916 1531 aa19.39■□□□□ 0.7
SNAPC1-201ENST00000216294 TRIM6-TRIM34B2RNG4 842 aa19.39■□□□□ 0.7
SNAPC1-201ENST00000216294 LMOD2Q6P5Q4 547 aa19.39■□□□□ 0.7
SNAPC1-201ENST00000216294 UBE2Q2Q8WVN8 375 aa19.39■□□□□ 0.7
SNAPC1-201ENST00000216294 RTF1Q92541 710 aaKnown RBP19.39■□□□□ 0.7
SNAPC1-201ENST00000216294 MPNDQ8N594 471 aa19.39■□□□□ 0.69
SNAPC1-201ENST00000216294 UPF3BQ9BZI7 483 aaKnown RBP19.39■□□□□ 0.69
SNAPC1-201ENST00000216294 GDPD2Q9HCC8 539 aa19.39■□□□□ 0.69
SNAPC1-201ENST00000216294 HSPA2P54652 639 aa19.38■□□□□ 0.69
SNAPC1-201ENST00000216294 RNF214Q8ND24 703 aa19.38■□□□□ 0.69
SNAPC1-201ENST00000216294 IL1RAPL2Q9NP60 686 aa19.38■□□□□ 0.69
SNAPC1-201ENST00000216294 ERC2O15083 957 aa19.38■□□□□ 0.69
SNAPC1-201ENST00000216294 SYCE3A1L190 88 aa19.38■□□□□ 0.69
SNAPC1-201ENST00000216294 ST18O60284 1047 aa19.38■□□□□ 0.69
SNAPC1-201ENST00000216294 FKBP5Q13451 457 aaPredicted RBP19.37■□□□□ 0.69
SNAPC1-201ENST00000216294 CASC1Q6TDU7 716 aa19.37■□□□□ 0.69
SNAPC1-201ENST00000216294 IP6K1Q92551 441 aa19.37■□□□□ 0.69
SNAPC1-201ENST00000216294 TMEM63CQ9P1W3 806 aa19.37■□□□□ 0.69
SNAPC1-201ENST00000216294 LTN1O94822 1766 aa19.37■□□□□ 0.69
SNAPC1-201ENST00000216294 NUCB2P80303 420 aa19.36■□□□□ 0.69
SNAPC1-201ENST00000216294 TMX3Q96JJ7 454 aa19.36■□□□□ 0.69
SNAPC1-201ENST00000216294 ANO2Q9NQ90 1003 aa19.36■□□□□ 0.69
SNAPC1-201ENST00000216294 C1orf167Q5SNV9 1468 aa19.36■□□□□ 0.69
SNAPC1-201ENST00000216294 C19orf44Q9H6X5 657 aa19.36■□□□□ 0.69
SNAPC1-201ENST00000216294 CLEC17AQ6ZS10 378 aa19.35■□□□□ 0.69
SNAPC1-201ENST00000216294 NUTM1Q86Y26 1132 aa19.35■□□□□ 0.69
SNAPC1-201ENST00000216294 TMEM94Q12767 1356 aa19.35■□□□□ 0.69
SNAPC1-201ENST00000216294 KCNH5Q8NCM2 988 aa19.34■□□□□ 0.69
SNAPC1-201ENST00000216294 ISY1Q9ULR0 285 aaKnown RBP19.34■□□□□ 0.69
SNAPC1-201ENST00000216294 PTPRCP08575 1304 aa19.34■□□□□ 0.69
SNAPC1-201ENST00000216294 REC8O95072 547 aa19.34■□□□□ 0.69
SNAPC1-201ENST00000216294 GCP02774 474 aa19.34■□□□□ 0.69
SNAPC1-201ENST00000216294 CCDC173Q0VFZ6 552 aa19.34■□□□□ 0.69
SNAPC1-201ENST00000216294 NBPF6Q5VWK0 638 aa19.34■□□□□ 0.69
SNAPC1-201ENST00000216294 KRT28Q7Z3Y7 464 aa19.34■□□□□ 0.69
SNAPC1-201ENST00000216294 NBPF4Q96M43 638 aa19.34■□□□□ 0.69
SNAPC1-201ENST00000216294 LRRFIP2Q9Y608 721 aaKnown RBP19.34■□□□□ 0.69
SNAPC1-201ENST00000216294 DDX17Q92841 729 aaKnown RBP19.33■□□□□ 0.68
SNAPC1-201ENST00000216294 LRRC59Q96AG4 307 aaKnown RBP19.33■□□□□ 0.68
SNAPC1-201ENST00000216294 TCHHQ07283 1943 aa19.33■□□□□ 0.68
SNAPC1-201ENST00000216294 KIAA0232Q92628 1395 aa19.32■□□□□ 0.68
SNAPC1-201ENST00000216294 GNAT3A8MTJ3 354 aa19.32■□□□□ 0.68
SNAPC1-201ENST00000216294 GNAI2P04899 355 aa19.32■□□□□ 0.68
SNAPC1-201ENST00000216294 PPP1R9BQ96SB3 815 aa19.32■□□□□ 0.68
SNAPC1-201ENST00000216294 FLIIQ13045 1269 aa19.32■□□□□ 0.68
SNAPC1-201ENST00000216294 KIAA1211Q6ZU35 1233 aa19.32■□□□□ 0.68
SNAPC1-201ENST00000216294 ESYT1Q9BSJ8 1104 aa19.32■□□□□ 0.68
SNAPC1-201ENST00000216294 PHAXQ9H814 394 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms