RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 TRPM3Q9HCF6 1732 aaPredicted RBP13.45□□□□□ -0.26
APOBEC3D-201ENST00000216099 NFAT5O94916 1531 aa13.45□□□□□ -0.26
APOBEC3D-201ENST00000216099 IPO8O15397 1037 aaKnown RBP13.45□□□□□ -0.26
APOBEC3D-201ENST00000216099 SULT6B1Q6IMI4 303 aa13.44□□□□□ -0.26
APOBEC3D-201ENST00000216099 ATF7IPQ6VMQ6 1270 aa13.44□□□□□ -0.26
APOBEC3D-201ENST00000216099 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
APOBEC3D-201ENST00000216099 HSP90AB2PQ58FF8 381 aa13.44□□□□□ -0.26
APOBEC3D-201ENST00000216099 GPIHBP1Q8IV16 184 aa13.44□□□□□ -0.26
APOBEC3D-201ENST00000216099 TNNQ9UQP3 1299 aa13.43□□□□□ -0.26
APOBEC3D-201ENST00000216099 IGSF1Q8N6C5 1336 aa13.43□□□□□ -0.26
APOBEC3D-201ENST00000216099 BRD1O95696 1058 aa13.43□□□□□ -0.26
APOBEC3D-201ENST00000216099 IGHDP01880 384 aa13.43□□□□□ -0.26
APOBEC3D-201ENST00000216099 FTSJ3Q8IY81 847 aaKnown RBP13.43□□□□□ -0.26
APOBEC3D-201ENST00000216099 CACNA1FO60840 1977 aa13.42□□□□□ -0.26
APOBEC3D-201ENST00000216099 TRIM27P14373 513 aa13.42□□□□□ -0.26
APOBEC3D-201ENST00000216099 ANP32AP39687 249 aaKnown RBP13.42□□□□□ -0.26
APOBEC3D-201ENST00000216099 NLRP6P59044 892 aa13.42□□□□□ -0.26
APOBEC3D-201ENST00000216099 ARHGAP45Q92619 1136 aa13.42□□□□□ -0.26
APOBEC3D-201ENST00000216099 MBIPQ9NS73 344 aa13.42□□□□□ -0.26
APOBEC3D-201ENST00000216099 DDX19BQ9UMR2 479 aa13.42□□□□□ -0.26
APOBEC3D-201ENST00000216099 SLIT3O75094 1523 aa13.41□□□□□ -0.26
APOBEC3D-201ENST00000216099 VAMP4O75379 141 aa13.41□□□□□ -0.26
APOBEC3D-201ENST00000216099 IVNS1ABPQ9Y6Y0 642 aa13.41□□□□□ -0.26
APOBEC3D-201ENST00000216099 DCAF8L1A6NGE4 600 aa13.41□□□□□ -0.26
APOBEC3D-201ENST00000216099 ZNF662Q6ZS27 426 aa13.41□□□□□ -0.26
APOBEC3D-201ENST00000216099 THUMPD2Q9BTF0 503 aaKnown RBP13.41□□□□□ -0.26
APOBEC3D-201ENST00000216099 NOB1Q9ULX3 412 aaKnown RBP13.41□□□□□ -0.26
APOBEC3D-201ENST00000216099 STRCP1A6NGW2 1772 aa13.4□□□□□ -0.26
APOBEC3D-201ENST00000216099 AMPHP49418 695 aa13.4□□□□□ -0.26
APOBEC3D-201ENST00000216099 PARP9Q8IXQ6 854 aa13.4□□□□□ -0.26
APOBEC3D-201ENST00000216099 KIAA0232Q92628 1395 aa13.4□□□□□ -0.26
APOBEC3D-201ENST00000216099 RWDD1Q9H446 243 aaPredicted RBP13.4□□□□□ -0.26
APOBEC3D-201ENST00000216099 LAS1LQ9Y4W2 734 aaKnown RBP13.4□□□□□ -0.26
APOBEC3D-201ENST00000216099 PCDHB15Q9Y5E8 787 aa13.4□□□□□ -0.26
APOBEC3D-201ENST00000216099 CRB1P82279 1406 aa13.39□□□□□ -0.27
APOBEC3D-201ENST00000216099 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
APOBEC3D-201ENST00000216099 ALS2Q96Q42 1657 aa13.39□□□□□ -0.27
APOBEC3D-201ENST00000216099 PRDM10Q9NQV6 1147 aa13.39□□□□□ -0.27
APOBEC3D-201ENST00000216099 CAMTA1Q9Y6Y1 1673 aa13.39□□□□□ -0.27
APOBEC3D-201ENST00000216099 RGPD2P0DJD1 1756 aa13.39□□□□□ -0.27
APOBEC3D-201ENST00000216099 MST1RQ04912 1400 aa13.39□□□□□ -0.27
APOBEC3D-201ENST00000216099 HOXC9P31274 260 aa13.39□□□□□ -0.27
APOBEC3D-201ENST00000216099 ABTB2Q8N961 1025 aa13.39□□□□□ -0.27
APOBEC3D-201ENST00000216099 FAM161AQ3B820 660 aa13.38□□□□□ -0.27
APOBEC3D-201ENST00000216099 PPP1R1BQ9UD71 204 aaPredicted RBP13.38□□□□□ -0.27
APOBEC3D-201ENST00000216099 SKAP1Q86WV1 359 aa13.38□□□□□ -0.27
APOBEC3D-201ENST00000216099 NCOA3Q9Y6Q9 1424 aa13.37□□□□□ -0.27
APOBEC3D-201ENST00000216099 CHL1O00533 1208 aa13.37□□□□□ -0.27
APOBEC3D-201ENST00000216099 HTATSF1O43719 755 aaKnown RBP13.37□□□□□ -0.27
APOBEC3D-201ENST00000216099 HDAC1Q13547 482 aaPredicted RBP13.37□□□□□ -0.27
APOBEC3D-201ENST00000216099 TWISTNBQ3B726 338 aaPredicted RBP13.37□□□□□ -0.27
APOBEC3D-201ENST00000216099 EYA1Q99502 592 aa13.37□□□□□ -0.27
APOBEC3D-201ENST00000216099 CHMP4BQ9H444 224 aaKnown RBP13.37□□□□□ -0.27
APOBEC3D-201ENST00000216099 N4BP2Q86UW6 1770 aaPredicted RBP13.37□□□□□ -0.27
APOBEC3D-201ENST00000216099 LMO7Q8WWI1 1683 aa13.37□□□□□ -0.27
APOBEC3D-201ENST00000216099 FAM83GA6ND36 823 aa13.37□□□□□ -0.27
APOBEC3D-201ENST00000216099 GAS2L2Q8NHY3 880 aa13.37□□□□□ -0.27
APOBEC3D-201ENST00000216099 FAM208AQ9UK61 1670 aaKnown RBP13.36□□□□□ -0.27
APOBEC3D-201ENST00000216099 DCCP43146 1447 aa13.36□□□□□ -0.27
APOBEC3D-201ENST00000216099 SOX12O15370 315 aa13.36□□□□□ -0.27
APOBEC3D-201ENST00000216099 TMEM57Q8N5G2 664 aa13.36□□□□□ -0.27
APOBEC3D-201ENST00000216099 TSPYL6Q8N831 410 aa13.36□□□□□ -0.27
APOBEC3D-201ENST00000216099 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
APOBEC3D-201ENST00000216099 ITPRIPQ8IWB1 547 aa13.36□□□□□ -0.27
APOBEC3D-201ENST00000216099 ABCC4O15439 1325 aa13.35□□□□□ -0.27
APOBEC3D-201ENST00000216099 RBM10P98175 930 aaKnown RBP13.35□□□□□ -0.27
APOBEC3D-201ENST00000216099 SKIV2LQ15477 1246 aaKnown RBP13.35□□□□□ -0.27
APOBEC3D-201ENST00000216099 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
APOBEC3D-201ENST00000216099 ZBTB40Q9NUA8 1239 aa13.35□□□□□ -0.27
APOBEC3D-201ENST00000216099 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
APOBEC3D-201ENST00000216099 C8orf34Q49A92 452 aa13.35□□□□□ -0.27
APOBEC3D-201ENST00000216099 C8orf58Q8NAV2 365 aa13.35□□□□□ -0.27
APOBEC3D-201ENST00000216099 DCTN1Q14203 1278 aa13.34□□□□□ -0.27
APOBEC3D-201ENST00000216099 ESCO1Q5FWF5 840 aa13.34□□□□□ -0.27
APOBEC3D-201ENST00000216099 IP6K1Q92551 441 aa13.34□□□□□ -0.27
APOBEC3D-201ENST00000216099 C1orf167Q5SNV9 1468 aa13.34□□□□□ -0.27
APOBEC3D-201ENST00000216099 XIRP1Q702N8 1843 aaKnown RBP13.34□□□□□ -0.27
APOBEC3D-201ENST00000216099 NCAPD2Q15021 1401 aa13.34□□□□□ -0.27
APOBEC3D-201ENST00000216099 PSME1Q06323 249 aa13.34□□□□□ -0.27
APOBEC3D-201ENST00000216099 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
APOBEC3D-201ENST00000216099 API5Q9BZZ5 524 aaKnown RBP13.34□□□□□ -0.27
APOBEC3D-201ENST00000216099 PPP1R37O75864 691 aa13.33□□□□□ -0.28
APOBEC3D-201ENST00000216099 RGS3P49796 1198 aa13.33□□□□□ -0.28
APOBEC3D-201ENST00000216099 SPATA32Q96LK8 384 aa13.33□□□□□ -0.28
APOBEC3D-201ENST00000216099 KDM3BQ7LBC6 1761 aa13.33□□□□□ -0.28
APOBEC3D-201ENST00000216099 RGPD5Q99666 1765 aa13.33□□□□□ -0.28
APOBEC3D-201ENST00000216099 MED1Q15648 1581 aaPredicted RBP13.33□□□□□ -0.28
APOBEC3D-201ENST00000216099 NOP58Q9Y2X3 529 aaKnown RBP13.33□□□□□ -0.28
APOBEC3D-201ENST00000216099 NUTM2GQ5VZR2 741 aa13.32□□□□□ -0.28
APOBEC3D-201ENST00000216099 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
APOBEC3D-201ENST00000216099 MCM10Q7L590 875 aa13.32□□□□□ -0.28
APOBEC3D-201ENST00000216099 MRRFQ96E11 262 aaKnown RBP13.32□□□□□ -0.28
APOBEC3D-201ENST00000216099 CRYBG1Q9Y4K1 1723 aa13.32□□□□□ -0.28
APOBEC3D-201ENST00000216099 USP19O94966 1318 aa13.32□□□□□ -0.28
APOBEC3D-201ENST00000216099 RTF1Q92541 710 aaKnown RBP13.32□□□□□ -0.28
APOBEC3D-201ENST00000216099 PDZRN3Q9UPQ7 1066 aa13.32□□□□□ -0.28
APOBEC3D-201ENST00000216099 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
APOBEC3D-201ENST00000216099 BABAM1Q9NWV8 329 aa13.31□□□□□ -0.28
APOBEC3D-201ENST00000216099 SOS1Q07889 1333 aaPredicted RBP13.31□□□□□ -0.28
APOBEC3D-201ENST00000216099 MSH6P52701 1360 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms