RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 ATG3Q9NT62 314 aa23.21■■□□□ 1.31
MRPL28-201ENST00000199706 C4BP0C0L5 1744 aa23.21■■□□□ 1.31
MRPL28-201ENST00000199706 LOC102724428A0A0B4J2F2 783 aa23.2■■□□□ 1.3
MRPL28-201ENST00000199706 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
MRPL28-201ENST00000199706 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
MRPL28-201ENST00000199706 SIK1P57059 783 aa23.2■■□□□ 1.3
MRPL28-201ENST00000199706 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.3
MRPL28-201ENST00000199706 SLC52A2Q9HAB3 445 aa23.2■■□□□ 1.3
MRPL28-201ENST00000199706 ASAP1Q9ULH1 1129 aa23.2■■□□□ 1.3
MRPL28-201ENST00000199706 CEMIPQ8WUJ3 1361 aa23.19■■□□□ 1.3
MRPL28-201ENST00000199706 ZNF827Q17R98 1081 aa23.19■■□□□ 1.3
MRPL28-201ENST00000199706 PHACTR3Q96KR7 559 aa23.19■■□□□ 1.3
MRPL28-201ENST00000199706 COL5A3P25940 1745 aaPredicted RBP23.19■■□□□ 1.3
MRPL28-201ENST00000199706 UBR2Q8IWV8 1755 aa23.17■■□□□ 1.3
MRPL28-201ENST00000199706 NFATC2IPQ8NCF5 419 aa23.17■■□□□ 1.3
MRPL28-201ENST00000199706 COL24A1Q17RW2 1714 aa23.16■■□□□ 1.3
MRPL28-201ENST00000199706 UBR3Q6ZT12 1888 aa23.16■■□□□ 1.3
MRPL28-201ENST00000199706 HTATSF1O43719 755 aaKnown RBP23.16■■□□□ 1.3
MRPL28-201ENST00000199706 LGR6Q9HBX8 967 aa23.16■■□□□ 1.3
MRPL28-201ENST00000199706 NEFMP07197 916 aa23.15■■□□□ 1.3
MRPL28-201ENST00000199706 PLEKHF1Q96S99 279 aa23.15■■□□□ 1.3
MRPL28-201ENST00000199706 SLC16A10Q8TF71 515 aa23.14■■□□□ 1.29
MRPL28-201ENST00000199706 DLG5Q8TDM6 1919 aa23.14■■□□□ 1.29
MRPL28-201ENST00000199706 KCNQ4P56696 695 aa23.13■■□□□ 1.29
MRPL28-201ENST00000199706 PNPLA7Q6ZV29 1317 aa23.12■■□□□ 1.29
MRPL28-201ENST00000199706 TJP1Q07157 1748 aa23.12■■□□□ 1.29
MRPL28-201ENST00000199706 FLAD1Q8NFF5 587 aa23.12■■□□□ 1.29
MRPL28-201ENST00000199706 IL17REQ8NFR9 667 aa23.12■■□□□ 1.29
MRPL28-201ENST00000199706 SPON1Q9HCB6 807 aa23.12■■□□□ 1.29
MRPL28-201ENST00000199706 TFCP2L1Q9NZI6 479 aa23.12■■□□□ 1.29
MRPL28-201ENST00000199706 KCPQ6ZWJ8 1503 aa23.12■■□□□ 1.29
MRPL28-201ENST00000199706 ATP6V1AP38606 617 aa23.11■■□□□ 1.29
MRPL28-201ENST00000199706 MTFR1LQ9H019 292 aa23.11■■□□□ 1.29
MRPL28-201ENST00000199706 ITPK1Q13572 414 aa23.1■■□□□ 1.29
MRPL28-201ENST00000199706 CNTNAP4Q9C0A0 1308 aa23.09■■□□□ 1.29
MRPL28-201ENST00000199706 MAPK8IP3Q9UPT6 1336 aa23.09■■□□□ 1.29
MRPL28-201ENST00000199706 TEFQ10587 303 aa23.09■■□□□ 1.29
MRPL28-201ENST00000199706 LINC00116Q8NCU8 138 aa23.09■■□□□ 1.29
MRPL28-201ENST00000199706 SLC4A9Q96Q91 983 aa23.09■■□□□ 1.29
MRPL28-201ENST00000199706 RC3H1Q5TC82 1133 aaKnown RBP23.08■■□□□ 1.29
MRPL28-201ENST00000199706 VSIG10Q8N0Z9 540 aa23.08■■□□□ 1.29
MRPL28-201ENST00000199706 RTF1Q92541 710 aaKnown RBP23.08■■□□□ 1.29
MRPL28-201ENST00000199706 PDGFDQ9GZP0 370 aaPredicted RBP23.08■■□□□ 1.29
MRPL28-201ENST00000199706 SSFA2P28290 1259 aa23.07■■□□□ 1.28
MRPL28-201ENST00000199706 NFE2L2Q16236 605 aa23.07■■□□□ 1.28
MRPL28-201ENST00000199706 AK7Q96M32 723 aa23.07■■□□□ 1.28
MRPL28-201ENST00000199706 WDR43Q15061 677 aaKnown RBP eCLIP23.06■■□□□ 1.28
MRPL28-201ENST00000199706 RBM42Q9BTD8 480 aaKnown RBP23.06■■□□□ 1.28
MRPL28-201ENST00000199706 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
MRPL28-201ENST00000199706 SGIP1Q9BQI5 828 aa23.04■■□□□ 1.28
MRPL28-201ENST00000199706 ANP32CO43423 234 aa23.03■■□□□ 1.28
MRPL28-201ENST00000199706 PTCD1O75127 700 aaKnown RBP23.03■■□□□ 1.28
MRPL28-201ENST00000199706 ADRA2BP18089 450 aa23.03■■□□□ 1.28
MRPL28-201ENST00000199706 PTGER2P43116 358 aa23.03■■□□□ 1.28
MRPL28-201ENST00000199706 ZNF790Q6PG37 636 aa23.03■■□□□ 1.28
MRPL28-201ENST00000199706 ZBTB7AO95365 584 aa23.02■■□□□ 1.28
MRPL28-201ENST00000199706 TTC5Q8N0Z6 440 aa23.02■■□□□ 1.28
MRPL28-201ENST00000199706 COL23A1Q86Y22 540 aaPredicted RBP23.01■■□□□ 1.27
MRPL28-201ENST00000199706 KDM3BQ7LBC6 1761 aa23■■□□□ 1.27
MRPL28-201ENST00000199706 GNPATO15228 680 aa23■■□□□ 1.27
MRPL28-201ENST00000199706 LMOD3Q0VAK6 560 aa23■■□□□ 1.27
MRPL28-201ENST00000199706 SLC39A6Q13433 755 aa23■■□□□ 1.27
MRPL28-201ENST00000199706 MCM10Q7L590 875 aa23■■□□□ 1.27
MRPL28-201ENST00000199706 RUNDC1Q96C34 613 aa23■■□□□ 1.27
MRPL28-201ENST00000199706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.99■■□□□ 1.27
MRPL28-201ENST00000199706 ADAMTS8Q9UP79 889 aa22.99■■□□□ 1.27
MRPL28-201ENST00000199706 HEG1Q9ULI3 1381 aa22.99■■□□□ 1.27
MRPL28-201ENST00000199706 BTBD11A6QL63 1104 aa22.98■■□□□ 1.27
MRPL28-201ENST00000199706 RPS6KA4O75676 772 aa22.98■■□□□ 1.27
MRPL28-201ENST00000199706 TEX13AQ9BXU3 409 aaPredicted RBP22.98■■□□□ 1.27
MRPL28-201ENST00000199706 RTCBQ9Y3I0 505 aaKnown RBP22.98■■□□□ 1.27
MRPL28-201ENST00000199706 C4AP0C0L4 1744 aa22.98■■□□□ 1.27
MRPL28-201ENST00000199706 TMPOP42166 694 aaKnown RBP22.97■■□□□ 1.27
MRPL28-201ENST00000199706 CRKLP46109 303 aaKnown RBP22.97■■□□□ 1.27
MRPL28-201ENST00000199706 AMIGO3Q86WK7 504 aa22.97■■□□□ 1.27
MRPL28-201ENST00000199706 PNISRQ8TF01 805 aaKnown RBP22.97■■□□□ 1.27
MRPL28-201ENST00000199706 FMNL2Q96PY5 1086 aa22.97■■□□□ 1.27
MRPL28-201ENST00000199706 TAF7Q15545 349 aaPredicted RBP22.96■■□□□ 1.27
MRPL28-201ENST00000199706 ZNF496Q96IT1 587 aaPredicted RBP22.96■■□□□ 1.27
MRPL28-201ENST00000199706 CYP19A1P11511 503 aaPredicted RBP22.95■■□□□ 1.26
MRPL28-201ENST00000199706 DNAJC10Q8IXB1 793 aa22.95■■□□□ 1.26
MRPL28-201ENST00000199706 ATF5Q9Y2D1 282 aaPredicted RBP22.95■■□□□ 1.26
MRPL28-201ENST00000199706 POLD1P28340 1107 aa22.94■■□□□ 1.26
MRPL28-201ENST00000199706 DCTN1Q14203 1278 aa22.94■■□□□ 1.26
MRPL28-201ENST00000199706 CCDC87Q9NVE4 849 aa22.94■■□□□ 1.26
MRPL28-201ENST00000199706 BABAM1Q9NWV8 329 aa22.94■■□□□ 1.26
MRPL28-201ENST00000199706 PPP1R1BQ9UD71 204 aaPredicted RBP22.94■■□□□ 1.26
MRPL28-201ENST00000199706 STARD3NLO95772 234 aa22.93■■□□□ 1.26
MRPL28-201ENST00000199706 RIPK4P57078 832 aa22.93■■□□□ 1.26
MRPL28-201ENST00000199706 TRAPPC3LQ5T215 181 aa22.93■■□□□ 1.26
MRPL28-201ENST00000199706 INTS5Q6P9B9 1019 aaKnown RBP22.93■■□□□ 1.26
MRPL28-201ENST00000199706 LAMB4A4D0S4 1761 aa22.93■■□□□ 1.26
MRPL28-201ENST00000199706 SOS1Q07889 1333 aaPredicted RBP22.91■■□□□ 1.26
MRPL28-201ENST00000199706 MSH5O43196 834 aa22.91■■□□□ 1.26
MRPL28-201ENST00000199706 PHF14O94880 888 aa22.91■■□□□ 1.26
MRPL28-201ENST00000199706 ARXQ96QS3 562 aa22.91■■□□□ 1.26
MRPL28-201ENST00000199706 CCDC146Q8IYE0 955 aa22.9■■□□□ 1.26
MRPL28-201ENST00000199706 MRS2Q9HD23 443 aa22.89■■□□□ 1.25
MRPL28-201ENST00000199706 SNRPA1P09661 255 aaKnown RBP22.88■■□□□ 1.25
MRPL28-201ENST00000199706 CCDC184Q52MB2 194 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms