RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 RIPK4P57078 832 aa13.92□□□□□ -0.18
MRPS35-201ENST00000081029 NFE2L2Q16236 605 aa13.92□□□□□ -0.18
MRPS35-201ENST00000081029 NBPF14Q5TI25 921 aa13.92□□□□□ -0.18
MRPS35-201ENST00000081029 RUNDC1Q96C34 613 aa13.92□□□□□ -0.18
MRPS35-201ENST00000081029 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
MRPS35-201ENST00000081029 SLC52A2Q9HAB3 445 aa13.92□□□□□ -0.18
MRPS35-201ENST00000081029 CCNL1Q9UK58 526 aaPredicted RBP13.92□□□□□ -0.18
MRPS35-201ENST00000081029 ITGB4P16144 1822 aa13.92□□□□□ -0.18
MRPS35-201ENST00000081029 PALLDQ8WX93 1383 aa13.92□□□□□ -0.18
MRPS35-201ENST00000081029 PSDA5PKW4 1024 aaPredicted RBP13.91□□□□□ -0.18
MRPS35-201ENST00000081029 SMARCC1Q92922 1105 aaPredicted RBP13.91□□□□□ -0.18
MRPS35-201ENST00000081029 ATG3Q9NT62 314 aa13.91□□□□□ -0.18
MRPS35-201ENST00000081029 PTCD1O75127 700 aaKnown RBP13.91□□□□□ -0.18
MRPS35-201ENST00000081029 SLC39A6Q13433 755 aa13.91□□□□□ -0.18
MRPS35-201ENST00000081029 LRRC4BQ9NT99 713 aa13.91□□□□□ -0.18
MRPS35-201ENST00000081029 THUMPD2Q9BTF0 503 aaKnown RBP13.9□□□□□ -0.18
MRPS35-201ENST00000081029 TMPOP42166 694 aaKnown RBP13.89□□□□□ -0.19
MRPS35-201ENST00000081029 R3HDM1Q15032 1099 aaKnown RBP13.89□□□□□ -0.19
MRPS35-201ENST00000081029 APAF1O14727 1248 aa13.89□□□□□ -0.19
MRPS35-201ENST00000081029 ATP6V1AP38606 617 aa13.89□□□□□ -0.19
MRPS35-201ENST00000081029 SLC27A3Q5K4L6 730 aa13.89□□□□□ -0.19
MRPS35-201ENST00000081029 LOC102724428A0A0B4J2F2 783 aa13.88□□□□□ -0.19
MRPS35-201ENST00000081029 SIK1P57059 783 aa13.88□□□□□ -0.19
MRPS35-201ENST00000081029 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
MRPS35-201ENST00000081029 BTBD11A6QL63 1104 aa13.87□□□□□ -0.19
MRPS35-201ENST00000081029 HTATSF1O43719 755 aaKnown RBP13.87□□□□□ -0.19
MRPS35-201ENST00000081029 STK32BQ9NY57 414 aa13.87□□□□□ -0.19
MRPS35-201ENST00000081029 MIS18AQ9NYP9 233 aa13.87□□□□□ -0.19
MRPS35-201ENST00000081029 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
MRPS35-201ENST00000081029 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
MRPS35-201ENST00000081029 SALL2Q9Y467 1007 aaPredicted RBP13.86□□□□□ -0.19
MRPS35-201ENST00000081029 TFCP2L1Q9NZI6 479 aa13.85□□□□□ -0.19
MRPS35-201ENST00000081029 VIRMAQ69YN4 1812 aaKnown RBP13.85□□□□□ -0.19
MRPS35-201ENST00000081029 CEMIPQ8WUJ3 1361 aa13.85□□□□□ -0.19
MRPS35-201ENST00000081029 LMOD3Q0VAK6 560 aa13.84□□□□□ -0.19
MRPS35-201ENST00000081029 TAF7Q15545 349 aaPredicted RBP13.84□□□□□ -0.19
MRPS35-201ENST00000081029 LAS1LQ9Y4W2 734 aaKnown RBP13.84□□□□□ -0.19
MRPS35-201ENST00000081029 DLG5Q8TDM6 1919 aa13.84□□□□□ -0.19
MRPS35-201ENST00000081029 KCNQ3O43525 872 aa13.84□□□□□ -0.19
MRPS35-201ENST00000081029 ITPK1Q13572 414 aa13.84□□□□□ -0.19
MRPS35-201ENST00000081029 SLC15A2Q16348 729 aa13.84□□□□□ -0.19
MRPS35-201ENST00000081029 ZNF790Q6PG37 636 aa13.84□□□□□ -0.19
MRPS35-201ENST00000081029 ZBED9Q6R2W3 1325 aa13.83□□□□□ -0.2
MRPS35-201ENST00000081029 ZNF827Q17R98 1081 aa13.83□□□□□ -0.2
MRPS35-201ENST00000081029 SLC4A9Q96Q91 983 aa13.83□□□□□ -0.2
MRPS35-201ENST00000081029 NUP188Q5SRE5 1749 aa13.83□□□□□ -0.2
MRPS35-201ENST00000081029 RREB1Q92766 1687 aa13.83□□□□□ -0.2
MRPS35-201ENST00000081029 MSH5O43196 834 aa13.82□□□□□ -0.2
MRPS35-201ENST00000081029 RGPD3A6NKT7 1758 aaPredicted RBP13.82□□□□□ -0.2
MRPS35-201ENST00000081029 RGPD4Q7Z3J3 1758 aa13.82□□□□□ -0.2
MRPS35-201ENST00000081029 LINC00116Q8NCU8 138 aa13.82□□□□□ -0.2
MRPS35-201ENST00000081029 ZNF496Q96IT1 587 aaPredicted RBP13.82□□□□□ -0.2
MRPS35-201ENST00000081029 TRIM35Q9UPQ4 493 aa13.82□□□□□ -0.2
MRPS35-201ENST00000081029 LY75O60449 1722 aa13.82□□□□□ -0.2
MRPS35-201ENST00000081029 SMIM5Q71RC9 77 aa13.81□□□□□ -0.2
MRPS35-201ENST00000081029 AK7Q96M32 723 aa13.81□□□□□ -0.2
MRPS35-201ENST00000081029 PDGFDQ9GZP0 370 aaPredicted RBP13.81□□□□□ -0.2
MRPS35-201ENST00000081029 PHF14O94880 888 aa13.8□□□□□ -0.2
MRPS35-201ENST00000081029 DNAJC10Q8IXB1 793 aa13.8□□□□□ -0.2
MRPS35-201ENST00000081029 AKT1S1Q96B36 256 aa13.8□□□□□ -0.2
MRPS35-201ENST00000081029 MRC1P22897 1456 aa13.8□□□□□ -0.2
MRPS35-201ENST00000081029 ADAMTS7Q9UKP4 1686 aa13.8□□□□□ -0.2
MRPS35-201ENST00000081029 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
MRPS35-201ENST00000081029 FMNL2Q96PY5 1086 aa13.8□□□□□ -0.2
MRPS35-201ENST00000081029 TSPYL4Q9UJ04 414 aa13.8□□□□□ -0.2
MRPS35-201ENST00000081029 GNPATO15228 680 aa13.79□□□□□ -0.2
MRPS35-201ENST00000081029 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
MRPS35-201ENST00000081029 ZBTB7AO95365 584 aa13.77□□□□□ -0.21
MRPS35-201ENST00000081029 CRKLP46109 303 aaKnown RBP13.77□□□□□ -0.21
MRPS35-201ENST00000081029 C5P01031 1676 aa13.76□□□□□ -0.21
MRPS35-201ENST00000081029 PRAMEF22A3QJZ6 481 aa13.76□□□□□ -0.21
MRPS35-201ENST00000081029 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
MRPS35-201ENST00000081029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.76□□□□□ -0.21
MRPS35-201ENST00000081029 STARD3NLO95772 234 aa13.76□□□□□ -0.21
MRPS35-201ENST00000081029 CANXP27824 592 aaKnown RBP13.76□□□□□ -0.21
MRPS35-201ENST00000081029 AMIGO3Q86WK7 504 aa13.76□□□□□ -0.21
MRPS35-201ENST00000081029 COL23A1Q86Y22 540 aaPredicted RBP13.76□□□□□ -0.21
MRPS35-201ENST00000081029 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
MRPS35-201ENST00000081029 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
MRPS35-201ENST00000081029 RTCBQ9Y3I0 505 aaKnown RBP13.76□□□□□ -0.21
MRPS35-201ENST00000081029 ZNF330Q9Y3S2 320 aaPredicted RBP13.76□□□□□ -0.21
MRPS35-201ENST00000081029 SIPA1L3O60292 1781 aaPredicted RBP13.75□□□□□ -0.21
MRPS35-201ENST00000081029 PNPLA7Q6ZV29 1317 aa13.75□□□□□ -0.21
MRPS35-201ENST00000081029 SNRPA1P09661 255 aaKnown RBP13.75□□□□□ -0.21
MRPS35-201ENST00000081029 CYP19A1P11511 503 aaPredicted RBP13.75□□□□□ -0.21
MRPS35-201ENST00000081029 WWC1Q8IX03 1113 aa13.75□□□□□ -0.21
MRPS35-201ENST00000081029 USP16Q9Y5T5 823 aa13.75□□□□□ -0.21
MRPS35-201ENST00000081029 KCPQ6ZWJ8 1503 aa13.75□□□□□ -0.21
MRPS35-201ENST00000081029 TAF1LQ8IZX4 1826 aa13.74□□□□□ -0.21
MRPS35-201ENST00000081029 EIF4A1P60842 406 aaKnown RBP13.74□□□□□ -0.21
MRPS35-201ENST00000081029 CALD1Q05682 793 aaKnown RBP13.74□□□□□ -0.21
MRPS35-201ENST00000081029 TRAPPC3LQ5T215 181 aa13.74□□□□□ -0.21
MRPS35-201ENST00000081029 ARXQ96QS3 562 aa13.74□□□□□ -0.21
MRPS35-201ENST00000081029 TEX13AQ9BXU3 409 aaPredicted RBP13.74□□□□□ -0.21
MRPS35-201ENST00000081029 C4BP0C0L5 1744 aa13.74□□□□□ -0.21
MRPS35-201ENST00000081029 PAPPAQ13219 1627 aa13.74□□□□□ -0.21
MRPS35-201ENST00000081029 CHL1O00533 1208 aa13.74□□□□□ -0.21
MRPS35-201ENST00000081029 PIP4K2AP48426 406 aaPredicted RBP13.74□□□□□ -0.21
MRPS35-201ENST00000081029 RC3H1Q5TC82 1133 aaKnown RBP13.74□□□□□ -0.21
MRPS35-201ENST00000081029 INTS5Q6P9B9 1019 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms