RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 BTBD11A6QL63 1104 aa13.46□□□□□ -0.26
CD4-201ENST00000011653 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.26
CD4-201ENST00000011653 PHKG2P15735 406 aa13.45□□□□□ -0.26
CD4-201ENST00000011653 FAM182BQ5T319 152 aa13.45□□□□□ -0.26
CD4-201ENST00000011653 RARSP54136 660 aaKnown RBP13.45□□□□□ -0.26
CD4-201ENST00000011653 TAF7Q15545 349 aaPredicted RBP13.45□□□□□ -0.26
CD4-201ENST00000011653 SSH1Q8WYL5 1049 aa13.45□□□□□ -0.26
CD4-201ENST00000011653 COL18A1P39060 1754 aa13.44□□□□□ -0.26
CD4-201ENST00000011653 EXOC5O00471 708 aa13.44□□□□□ -0.26
CD4-201ENST00000011653 CHL1O00533 1208 aa13.44□□□□□ -0.26
CD4-201ENST00000011653 PANK1Q8TE04 598 aa13.44□□□□□ -0.26
CD4-201ENST00000011653 CRYBG1Q9Y4K1 1723 aa13.43□□□□□ -0.26
CD4-201ENST00000011653 CABP4P57796 275 aa13.43□□□□□ -0.26
CD4-201ENST00000011653 IL16Q14005 1332 aa13.43□□□□□ -0.26
CD4-201ENST00000011653 CRB1P82279 1406 aa13.43□□□□□ -0.26
CD4-201ENST00000011653 ACSBG1Q96GR2 724 aa13.43□□□□□ -0.26
CD4-201ENST00000011653 ZNF853P0CG23 659 aa13.42□□□□□ -0.26
CD4-201ENST00000011653 UNC5CLQ8IV45 518 aa13.42□□□□□ -0.26
CD4-201ENST00000011653 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
CD4-201ENST00000011653 AFF2P51816 1311 aa13.42□□□□□ -0.26
CD4-201ENST00000011653 PTCD1O75127 700 aaKnown RBP13.42□□□□□ -0.26
CD4-201ENST00000011653 VAMP4O75379 141 aa13.41□□□□□ -0.26
CD4-201ENST00000011653 ANXA1P04083 346 aa13.41□□□□□ -0.26
CD4-201ENST00000011653 DDB1Q16531 1140 aa13.41□□□□□ -0.26
CD4-201ENST00000011653 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.41□□□□□ -0.26
CD4-201ENST00000011653 ZNF428Q96B54 188 aa13.41□□□□□ -0.26
CD4-201ENST00000011653 PRAMEF22A3QJZ6 481 aa13.41□□□□□ -0.26
CD4-201ENST00000011653 COG6Q9Y2V7 657 aa13.41□□□□□ -0.26
CD4-201ENST00000011653 NOB1Q9ULX3 412 aaKnown RBP13.4□□□□□ -0.26
CD4-201ENST00000011653 HTATSF1O43719 755 aaKnown RBP13.4□□□□□ -0.26
CD4-201ENST00000011653 PIP4K2AP48426 406 aaPredicted RBP13.4□□□□□ -0.26
CD4-201ENST00000011653 SPATA31A1Q5TZJ5 1347 aa13.4□□□□□ -0.27
CD4-201ENST00000011653 PCDH11XQ9BZA7 1347 aa13.4□□□□□ -0.27
CD4-201ENST00000011653 PCDH11YQ9BZA8 1340 aa13.4□□□□□ -0.27
CD4-201ENST00000011653 DDRGK1Q96HY6 314 aa13.39□□□□□ -0.27
CD4-201ENST00000011653 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
CD4-201ENST00000011653 LRP6O75581 1613 aa13.39□□□□□ -0.27
CD4-201ENST00000011653 FTSJ3Q8IY81 847 aaKnown RBP13.39□□□□□ -0.27
CD4-201ENST00000011653 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
CD4-201ENST00000011653 TTC5Q8N0Z6 440 aa13.39□□□□□ -0.27
CD4-201ENST00000011653 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
CD4-201ENST00000011653 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
CD4-201ENST00000011653 SLC52A2Q9HAB3 445 aa13.38□□□□□ -0.27
CD4-201ENST00000011653 LMO7Q8WWI1 1683 aa13.38□□□□□ -0.27
CD4-201ENST00000011653 KDM2BQ8NHM5 1336 aa13.38□□□□□ -0.27
CD4-201ENST00000011653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.27
CD4-201ENST00000011653 ZNF330Q9Y3S2 320 aaPredicted RBP13.37□□□□□ -0.27
CD4-201ENST00000011653 SPATA31A5Q5VU36 1347 aa13.37□□□□□ -0.27
CD4-201ENST00000011653 SPATA31A7Q8IWB4 1347 aa13.37□□□□□ -0.27
CD4-201ENST00000011653 HDGFL1Q5TGJ6 251 aa13.37□□□□□ -0.27
CD4-201ENST00000011653 QTRT2Q9H974 415 aaKnown RBP13.37□□□□□ -0.27
CD4-201ENST00000011653 OVOS2A0A0G2JMS6 1433 aa13.36□□□□□ -0.27
CD4-201ENST00000011653 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
CD4-201ENST00000011653 RLBP1P12271 317 aa13.36□□□□□ -0.27
CD4-201ENST00000011653 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
CD4-201ENST00000011653 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
CD4-201ENST00000011653 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
CD4-201ENST00000011653 SLC4A10Q6U841 1118 aa13.35□□□□□ -0.27
CD4-201ENST00000011653 TMOD3Q9NYL9 352 aa13.35□□□□□ -0.27
CD4-201ENST00000011653 COL14A1Q05707 1796 aaKnown RBP13.35□□□□□ -0.27
CD4-201ENST00000011653 EIF4A1P60842 406 aaKnown RBP13.35□□□□□ -0.27
CD4-201ENST00000011653 ZKSCAN2Q63HK3 967 aa13.35□□□□□ -0.27
CD4-201ENST00000011653 ZNF790Q6PG37 636 aa13.35□□□□□ -0.27
CD4-201ENST00000011653 G2E3Q7L622 706 aa13.35□□□□□ -0.27
CD4-201ENST00000011653 SKAP1Q86WV1 359 aa13.35□□□□□ -0.27
CD4-201ENST00000011653 ZNF496Q96IT1 587 aaPredicted RBP13.35□□□□□ -0.27
CD4-201ENST00000011653 STK31Q9BXU1 1019 aa13.35□□□□□ -0.27
CD4-201ENST00000011653 CEMIPQ8WUJ3 1361 aa13.35□□□□□ -0.27
CD4-201ENST00000011653 EP400Q96L91 3159 aa13.35□□□□□ -0.27
CD4-201ENST00000011653 ITPRIPQ8IWB1 547 aa13.35□□□□□ -0.27
CD4-201ENST00000011653 FAM208AQ9UK61 1670 aaKnown RBP13.35□□□□□ -0.27
CD4-201ENST00000011653 NCAPD2Q15021 1401 aa13.34□□□□□ -0.27
CD4-201ENST00000011653 AIMP1Q12904 312 aaKnown RBP13.34□□□□□ -0.27
CD4-201ENST00000011653 FNBP4Q8N3X1 1017 aaPredicted RBP13.34□□□□□ -0.27
CD4-201ENST00000011653 F6X3S4 739 aa13.34□□□□□ -0.27
CD4-201ENST00000011653 TRIM27P14373 513 aa13.34□□□□□ -0.27
CD4-201ENST00000011653 MYL6BP14649 208 aa13.34□□□□□ -0.27
CD4-201ENST00000011653 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
CD4-201ENST00000011653 ASAP1Q9ULH1 1129 aa13.34□□□□□ -0.27
CD4-201ENST00000011653 COL22A1Q8NFW1 1626 aaPredicted RBP13.34□□□□□ -0.27
CD4-201ENST00000011653 BCL9LQ86UU0 1499 aa13.33□□□□□ -0.27
CD4-201ENST00000011653 PDE4CQ08493 712 aa13.33□□□□□ -0.27
CD4-201ENST00000011653 VPS72Q15906 364 aa13.33□□□□□ -0.27
CD4-201ENST00000011653 KCNQ2O43526 872 aa13.33□□□□□ -0.28
CD4-201ENST00000011653 DZIP1LQ8IYY4 767 aaKnown RBP13.33□□□□□ -0.28
CD4-201ENST00000011653 MRPL50Q8N5N7 158 aaKnown RBP13.33□□□□□ -0.28
CD4-201ENST00000011653 GJD4Q96KN9 370 aaPredicted RBP13.33□□□□□ -0.28
CD4-201ENST00000011653 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
CD4-201ENST00000011653 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
CD4-201ENST00000011653 PHAXQ9H814 394 aaKnown RBP13.32□□□□□ -0.28
CD4-201ENST00000011653 CHPF2Q9P2E5 772 aa13.32□□□□□ -0.28
CD4-201ENST00000011653 SLIT2O94813 1529 aa13.32□□□□□ -0.28
CD4-201ENST00000011653 ATF7IPQ6VMQ6 1270 aa13.32□□□□□ -0.28
CD4-201ENST00000011653 PIGBQ92521 554 aa13.32□□□□□ -0.28
CD4-201ENST00000011653 USP16Q9Y5T5 823 aa13.32□□□□□ -0.28
CD4-201ENST00000011653 PLCH1Q4KWH8 1693 aa13.31□□□□□ -0.28
CD4-201ENST00000011653 KCNQ4P56696 695 aa13.31□□□□□ -0.28
CD4-201ENST00000011653 CT47B1P0C2W7 299 aaPredicted RBP13.31□□□□□ -0.28
CD4-201ENST00000011653 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
CD4-201ENST00000011653 CCDC30Q5VVM6 783 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms