RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 NOL7Q9UMY1 257 aaKnown RBP17.11■□□□□ 0.33
USH1C-201ENST00000005226 CRB1P82279 1406 aa17.11■□□□□ 0.33
USH1C-201ENST00000005226 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
USH1C-201ENST00000005226 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
USH1C-201ENST00000005226 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
USH1C-201ENST00000005226 GADD45BO75293 160 aaPredicted RBP17.1■□□□□ 0.33
USH1C-201ENST00000005226 HAP1P54257 671 aaPredicted RBP17.1■□□□□ 0.33
USH1C-201ENST00000005226 RTF1Q92541 710 aaKnown RBP17.1■□□□□ 0.33
USH1C-201ENST00000005226 OSBPL3Q9H4L5 887 aa17.1■□□□□ 0.33
USH1C-201ENST00000005226 MX1P20591 662 aa17.1■□□□□ 0.33
USH1C-201ENST00000005226 FKBP5Q13451 457 aaPredicted RBP17.1■□□□□ 0.33
USH1C-201ENST00000005226 ZMYND15Q9H091 742 aa17.1■□□□□ 0.33
USH1C-201ENST00000005226 CHMLP26374 656 aa17.09■□□□□ 0.33
USH1C-201ENST00000005226 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
USH1C-201ENST00000005226 BRD1O95696 1058 aa17.09■□□□□ 0.33
USH1C-201ENST00000005226 CCT4P50991 539 aaKnown RBP17.09■□□□□ 0.33
USH1C-201ENST00000005226 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
USH1C-201ENST00000005226 NUTM1Q86Y26 1132 aa17.08■□□□□ 0.33
USH1C-201ENST00000005226 FAM69CQ0P6D2 419 aa17.08■□□□□ 0.32
USH1C-201ENST00000005226 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.08■□□□□ 0.32
USH1C-201ENST00000005226 ARID3AQ99856 593 aa17.07■□□□□ 0.32
USH1C-201ENST00000005226 FAM13BQ9NYF5 915 aa17.07■□□□□ 0.32
USH1C-201ENST00000005226 LRRFIP2Q9Y608 721 aaKnown RBP17.07■□□□□ 0.32
USH1C-201ENST00000005226 SALL3Q9BXA9 1300 aa17.07■□□□□ 0.32
USH1C-201ENST00000005226 FLIIQ13045 1269 aa17.06■□□□□ 0.32
USH1C-201ENST00000005226 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
USH1C-201ENST00000005226 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
USH1C-201ENST00000005226 CUL4AQ13619 759 aa17.05■□□□□ 0.32
USH1C-201ENST00000005226 ZKSCAN5Q9Y2L8 839 aa17.05■□□□□ 0.32
USH1C-201ENST00000005226 SETD1AO15047 1707 aaKnown RBP17.05■□□□□ 0.32
USH1C-201ENST00000005226 ATP8B2P98198 1209 aa17.05■□□□□ 0.32
USH1C-201ENST00000005226 ZNF500O60304 480 aaPredicted RBP17.04■□□□□ 0.32
USH1C-201ENST00000005226 MCCP23508 829 aa17.04■□□□□ 0.32
USH1C-201ENST00000005226 USP48Q86UV5 1035 aa17.04■□□□□ 0.32
USH1C-201ENST00000005226 EYA1Q99502 592 aa17.04■□□□□ 0.32
USH1C-201ENST00000005226 RIMS1Q86UR5 1692 aaKnown RBP17.04■□□□□ 0.32
USH1C-201ENST00000005226 HS1BP3Q53T59 392 aa17.04■□□□□ 0.32
USH1C-201ENST00000005226 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
USH1C-201ENST00000005226 ZNF830Q96NB3 372 aaPredicted RBP17.04■□□□□ 0.32
USH1C-201ENST00000005226 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
USH1C-201ENST00000005226 MBD3O95983 291 aa17.03■□□□□ 0.32
USH1C-201ENST00000005226 PTMAP06454 111 aaKnown RBP17.03■□□□□ 0.32
USH1C-201ENST00000005226 TSPY26PQ9H489 355 aa17.03■□□□□ 0.32
USH1C-201ENST00000005226 C3P01024 1663 aa17.02■□□□□ 0.32
USH1C-201ENST00000005226 UQCRHLA0A096LP55 91 aa17.02■□□□□ 0.32
USH1C-201ENST00000005226 UQCRHP07919 91 aa17.02■□□□□ 0.32
USH1C-201ENST00000005226 MON2Q7Z3U7 1717 aa17.02■□□□□ 0.32
USH1C-201ENST00000005226 PDCL3Q9H2J4 239 aa17.02■□□□□ 0.32
USH1C-201ENST00000005226 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.31
USH1C-201ENST00000005226 PEAK1Q9H792 1746 aa17.01■□□□□ 0.31
USH1C-201ENST00000005226 CPA1P15085 419 aa17.01■□□□□ 0.31
USH1C-201ENST00000005226 AMPHP49418 695 aa17.01■□□□□ 0.31
USH1C-201ENST00000005226 USP44Q9H0E7 712 aa17.01■□□□□ 0.31
USH1C-201ENST00000005226 PHAXQ9H814 394 aaKnown RBP17.01■□□□□ 0.31
USH1C-201ENST00000005226 GNAI3P08754 354 aa17.01■□□□□ 0.31
USH1C-201ENST00000005226 MCM2P49736 904 aa17.01■□□□□ 0.31
USH1C-201ENST00000005226 JARID2Q92833 1246 aaPredicted RBP17.01■□□□□ 0.31
USH1C-201ENST00000005226 SLC26A8Q96RN1 970 aa17.01■□□□□ 0.31
USH1C-201ENST00000005226 CCDC39Q9UFE4 941 aa17■□□□□ 0.31
USH1C-201ENST00000005226 CNPY2Q9Y2B0 182 aa17■□□□□ 0.31
USH1C-201ENST00000005226 SURF6O75683 361 aaKnown RBP16.99■□□□□ 0.31
USH1C-201ENST00000005226 OVOS2A0A0J9YW53 1432 aa16.99■□□□□ 0.31
USH1C-201ENST00000005226 OVOS2Q6IE36 1432 aa16.99■□□□□ 0.31
USH1C-201ENST00000005226 CCDC30Q5VVM6 783 aa16.99■□□□□ 0.31
USH1C-201ENST00000005226 PKNOX2Q96KN3 472 aa16.99■□□□□ 0.31
USH1C-201ENST00000005226 SRCIN1Q9C0H9 1055 aa16.99■□□□□ 0.31
USH1C-201ENST00000005226 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
USH1C-201ENST00000005226 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.99■□□□□ 0.31
USH1C-201ENST00000005226 C17orf53Q8N3J3 647 aaPredicted RBP16.98■□□□□ 0.31
USH1C-201ENST00000005226 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
USH1C-201ENST00000005226 PLPPR3Q6T4P5 718 aa16.98■□□□□ 0.31
USH1C-201ENST00000005226 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
USH1C-201ENST00000005226 IL17REQ8NFR9 667 aa16.98■□□□□ 0.31
USH1C-201ENST00000005226 DDX54Q8TDD1 881 aaKnown RBP16.98■□□□□ 0.31
USH1C-201ENST00000005226 INTS4Q96HW7 963 aaKnown RBP16.98■□□□□ 0.31
USH1C-201ENST00000005226 STAP2Q9UGK3 403 aa16.98■□□□□ 0.31
USH1C-201ENST00000005226 PLEKHG3A1L390 1219 aa16.98■□□□□ 0.31
USH1C-201ENST00000005226 UBTFL1P0CB47 393 aaPredicted RBP16.98■□□□□ 0.31
USH1C-201ENST00000005226 PPP1R42Q7Z4L9 355 aa16.98■□□□□ 0.31
USH1C-201ENST00000005226 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
USH1C-201ENST00000005226 ANAPC15P60006 121 aa16.97■□□□□ 0.31
USH1C-201ENST00000005226 USP25Q9UHP3 1055 aa16.97■□□□□ 0.31
USH1C-201ENST00000005226 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
USH1C-201ENST00000005226 AKAP12Q02952 1782 aa16.97■□□□□ 0.31
USH1C-201ENST00000005226 USP6P35125 1406 aa16.97■□□□□ 0.31
USH1C-201ENST00000005226 ITSN1Q15811 1721 aa16.97■□□□□ 0.31
USH1C-201ENST00000005226 USHBP1Q8N6Y0 703 aa16.97■□□□□ 0.31
USH1C-201ENST00000005226 HSPA4P34932 840 aa16.96■□□□□ 0.31
USH1C-201ENST00000005226 TSC1Q92574 1164 aa16.96■□□□□ 0.31
USH1C-201ENST00000005226 SIRT1Q96EB6 747 aa16.96■□□□□ 0.31
USH1C-201ENST00000005226 SPATA31D1Q6ZQQ2 1576 aa16.96■□□□□ 0.31
USH1C-201ENST00000005226 CEP170BQ9Y4F5 1589 aaPredicted RBP16.96■□□□□ 0.31
USH1C-201ENST00000005226 NGDNQ8NEJ9 315 aaKnown RBP16.96■□□□□ 0.3
USH1C-201ENST00000005226 TSPOAP1O95153 1857 aa16.95■□□□□ 0.3
USH1C-201ENST00000005226 LTKP29376 864 aa16.95■□□□□ 0.3
USH1C-201ENST00000005226 CWC27Q6UX04 472 aaKnown RBP16.95■□□□□ 0.3
USH1C-201ENST00000005226 SNX14Q9Y5W7 946 aa16.95■□□□□ 0.3
USH1C-201ENST00000005226 TCHHQ07283 1943 aa16.95■□□□□ 0.3
USH1C-201ENST00000005226 GNAT3A8MTJ3 354 aa16.95■□□□□ 0.3
USH1C-201ENST00000005226 ANXA1P04083 346 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms