RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Tubb4aQ9D6F9 444 aa16.61■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Trim34bJ3QNR8 485 aa16.61■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 LlphQ9D945 130 aaKnown RBP16.61■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Usp25P57080 1055 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Cfap157Q0VFX2 523 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Cep55Q8BT07 462 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Ssr1Q9CY50 286 aaKnown RBP16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Ctr9Q62018 1173 aaKnown RBP16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Sirt1Q923E4 737 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Smtnl1Q99LM3 459 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Cfap53Q9D439 514 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Ccdc94Q9D6J3 314 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Grin2bQ01097 1482 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Kif2aP28740 705 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Tex2Q6ZPJ0 1128 aaKnown RBP16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Ccdc172Q810N9 267 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 ClasrpQ8CFC7 668 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Serpina10Q8R121 448 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Riok1Q922Q2 567 aa16.6■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Serpinb6bO08804 377 aa16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Q3UPC7 1272 aa16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Zeb2Q9R0G7 1215 aa16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 DroshaQ5HZJ0 1373 aaKnown RBP16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Pik3r4Q8VD65 1358 aa16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Rbm27Q5SFM8 1060 aaKnown RBP16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 KdrP35918 1367 aa16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Zhx1P70121 873 aa16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Clul1Q3ZRW6 464 aa16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Naa15Q80UM3 865 aaKnown RBP16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Als2cr12Q8BVM7 383 aa16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Vps18Q8R307 973 aa16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Smco2Q9DA21 347 aa16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Nol7Q9D7Z3 254 aaKnown RBP16.59■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Rfx7F8VPJ6 1459 aa16.58■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Btbd11Q6GQW0 1109 aa16.58■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Mtmr3Q8K296 1196 aa16.58■□□□□ 0.25
Pcdha8-201ENSMUST00000194038 Naip5Q9R016 1403 aa16.58■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Flad1Q8R123 492 aa16.58■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Fbf1A2A870 1173 aa16.58■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Smc1aQ9CU62 1233 aaKnown RBP16.58■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Smarcc1P97496 1104 aa16.58■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Cdca8Q8BHX3 289 aa16.58■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Ttc19Q8CC21 365 aa16.58■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Ccdc141E9Q8Q6 1531 aa16.58■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Dync1i1O88485 628 aa16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 TkfcQ8VC30 578 aa16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Mybbp1aQ7TPV4 1344 aaKnown RBP16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Gm10093D3YYI8 482 aa16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Cfap73J3QPZ5 306 aa16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Hdac1O09106 482 aaKnown RBP16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Znf131Q8K3J5 619 aa16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Bloc1s2Q9CWG9 143 aa16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Zmym4A2A791 1549 aaKnown RBP16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Gm21680A0A0G2JGR8 267 aa16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Ankrd44B2RXR6 993 aa16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Atf3Q60765 181 aa16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Bcar3Q9QZK2 820 aa16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Knop1Q9Z2Q2 478 aaKnown RBP16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 LyarQ08288 388 aaKnown RBP16.57■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Sytl4Q9R0Q1 673 aa16.56■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Gng11P61953 73 aa16.56■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Rnf34Q99KR6 376 aa16.56■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Bag3Q9JLV1 577 aaKnown RBP16.56■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 NmiO35309 314 aa16.56■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Tsg101Q61187 391 aa16.56■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Txndc16Q7TN22 820 aa16.55■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Ano10Q8BH79 659 aa16.55■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Acbd3Q8BMP6 525 aa16.55■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Nap1l5Q9JJF0 156 aa16.55■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Ccdc12Q8R344 166 aaKnown RBP16.55■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Cetn2Q9R1K9 172 aa16.55■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Brd3Q8K2F0 726 aaKnown RBP16.55■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Atf7Q8R0S1 413 aa16.55■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 CebpzP53569 1052 aaKnown RBP16.55■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Rad23bP54728 416 aa16.55■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Tax1bp1Q3UKC1 814 aaKnown RBP16.55■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Ampd3O08739 766 aa16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Ncbp1Q3UYV9 790 aaKnown RBP16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Mrps27Q8BK72 415 aaKnown RBP16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Skor1Q8BX46 964 aa16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Polr3dQ91WD1 398 aa16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Mrpl44Q9CY73 333 aaKnown RBP16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Hmg20bQ9Z104 317 aa16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Rprd2Q6NXI6 1469 aaKnown RBP16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Fkbp5Q64378 456 aa16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Ankib1Q6ZPS6 1085 aa16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 IkQ9Z1M8 557 aaKnown RBP16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Akap2O54931 893 aa16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 GmnnO88513 206 aa16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Ddx46Q569Z5 1032 aaKnown RBP16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Cep120Q7TSG1 988 aa16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Gigyf1Q99MR1 1044 aaKnown RBP16.54■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Lrrfip2Q91WK0 415 aa16.53■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Srgap1Q91Z69 1062 aa16.53■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Ccdc112A0AUP1 442 aa16.53■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Catsper2A2ARP9 588 aa16.53■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Baiap2l1Q9DBJ3 514 aa16.52■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 A2mQ6GQT1 1474 aa16.52■□□□□ 0.24
Pcdha8-201ENSMUST00000194038 Bin1O08539 588 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms