RNA–Protein interactions for RNA: ENSMUST00000138559.8

Ube4a-204, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 3,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-204ENSMUST00000138559 TefQ9JLC6 301 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Shank3Q4ACU6 1730 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Pnpla7A2AJ88 1352 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Kiaa0319Q5SZV5 1081 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Jmjd4Q8BFT6 427 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Rps6ka4Q9Z2B9 773 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Chpf2Q3UU43 768 aa9.62□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Smg7Q5RJH6 1138 aaKnown RBP9.62□□□□□ -0.87
Ube4a-204ENSMUST00000138559 L3mbtl2P59178 703 aa9.62□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Afg3l2Q8JZQ2 802 aaKnown RBP9.62□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Lrit1Q8K099 624 aa9.62□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Atf5O70191 283 aa9.61□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Vamp4O70480 141 aa9.61□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Arhgap33Q80YF9 1305 aa9.61□□□□□ -0.87
Ube4a-204ENSMUST00000138559 PsapQ61207 557 aaKnown RBP9.61□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Msh6P54276 1358 aaKnown RBP9.61□□□□□ -0.87
Ube4a-204ENSMUST00000138559 G3bp1P97855 465 aaKnown RBP9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Cnnm1Q0GA42 951 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Cers3Q1A3B0 383 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 MpndQ3TV65 487 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Flad1Q8R123 492 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Rwdd1Q9CQK7 243 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Nav1Q8CH77 1875 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Cyp2d12Q8BVD2 504 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 GckrQ91X44 587 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 KarsQ99MN1 595 aaKnown RBP9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Atg3Q9CPX6 314 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Taf7Q9R1C0 341 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Erbb3Q61526 1339 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 GalcP54818 684 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Iqsec3Q3TES0 1195 aa9.6□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Fkbp4P30416 458 aa9.59□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Pde4dQ01063 747 aa9.59□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Cavin2Q63918 418 aaKnown RBP9.59□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Tnnt3Q9QZ47 272 aa9.59□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Adcy9P51830 1353 aa9.59□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Sos2Q02384 1333 aa9.59□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Col22a1E9Q7P1 1613 aa9.59□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Dcaf5Q80T85 946 aa9.59□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Tmem119Q8R138 280 aa9.59□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Cap2Q9CYT6 476 aa9.59□□□□□ -0.87
Ube4a-204ENSMUST00000138559 BcorQ8CGN4 1759 aa9.58□□□□□ -0.88
Ube4a-204ENSMUST00000138559 GapdhsQ64467 440 aa9.58□□□□□ -0.88
Ube4a-204ENSMUST00000138559 PigbQ9JJQ0 542 aa9.58□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Hmgb2P30681 210 aaKnown RBP9.58□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Plekhm2Q80TQ5 1018 aa9.58□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Tmco5bQ80X59 307 aa9.58□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Kndc1Q0KK55 1742 aa9.57□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Bcl2l13P59017 434 aa9.57□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Kiaa0319lQ8K135 1048 aa9.57□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Rangap1P46061 589 aaKnown RBP9.57□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Morc2aQ69ZX6 1030 aa9.57□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Mylk2Q8VCR8 613 aa9.57□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Sv2bQ8BG39 683 aa9.57□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Q8BT18 775 aa9.57□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Apbb1Q9QXJ1 710 aa9.57□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Ric1Q69ZJ7 1422 aa9.56□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Cnksr1A2A9K7 700 aa9.56□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Chl1P70232 1209 aa9.56□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Vars2Q3U2A8 1060 aa9.56□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Prkab2Q6PAM0 271 aa9.55□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Adamtsl1Q8BLI0 1745 aa9.55□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Bicdl1A0JNT9 577 aa9.55□□□□□ -0.88
Ube4a-204ENSMUST00000138559 SympkQ80X82 1284 aa9.55□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Pdia6Q922R8 440 aaKnown RBP9.55□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Erbb4Q61527 1308 aa9.55□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Nectin2P32507 530 aa9.54□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Amer1Q7TS75 1132 aa9.54□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Ankrd13dQ6PD24 605 aa9.54□□□□□ -0.88
Ube4a-204ENSMUST00000138559 MetP16056 1379 aa9.54□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Gm12185Q5NCB2 835 aa9.54□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Trim58Q5NCC9 485 aa9.54□□□□□ -0.88
Ube4a-204ENSMUST00000138559 CoilQ5SU73 570 aa9.54□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Fam83gQ5SWY7 812 aa9.54□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Snapc4Q8BP86 1333 aa9.53□□□□□ -0.88
Ube4a-204ENSMUST00000138559 MarsQ68FL6 902 aaKnown RBP9.53□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Smarcc1P97496 1104 aa9.53□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Syde2E9PUP1 1314 aa9.52□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Pim2Q62070 370 aa9.52□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Ric3Q8BPM6 367 aa9.52□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Aldh1l1Q8R0Y6 902 aa9.52□□□□□ -0.88
Ube4a-204ENSMUST00000138559 Ccdc6D3YZP9 469 aa9.52□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Q3UPC7 1272 aa9.52□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Trim52Q8CDV4 233 aa9.52□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Echdc1Q9D9V3 322 aa9.52□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Slc39a6Q8C145 765 aa9.52□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Nip7Q9CXK8 180 aaKnown RBP9.52□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Miga2Q8BK03 593 aa9.51□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Flt4P35917 1363 aa9.51□□□□□ -0.89
Ube4a-204ENSMUST00000138559 CoblQ5NBX1 1337 aaKnown RBP9.51□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Aplp1Q03157 653 aa9.51□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Ankle2Q6P1H6 964 aa9.51□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Znf330Q922H9 316 aa9.51□□□□□ -0.89
Ube4a-204ENSMUST00000138559 NeflP08551 543 aa9.5□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Apba2P98084 750 aa9.5□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Irf9Q61179 399 aa9.5□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Gigyf1Q99MR1 1044 aaKnown RBP9.5□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Disp3A3KFU9 1347 aa9.5□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Prr29B1ARI9 187 aa9.5□□□□□ -0.89
Ube4a-204ENSMUST00000138559 Gnl3lQ6PGG6 577 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 55.4 ms