Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 ZNF444P1-201ENST00000559497 298 ntBASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 AC079602.3-201ENST00000623931 403 ntBASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.12■□□□□ 0.97
BCAS3Q9H6U6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 HBZP1-201ENST00000354915 429 ntBASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 AL136038.3-201ENST00000561909 1096 ntBASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCAS3Q9H6U6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 VENTXP5-201ENST00000523979 775 ntBASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 AC098818.2-201ENST00000564925 2320 ntBASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
BCAS3Q9H6U6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 AC093458.2-201ENST00000623150 629 ntBASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 AL109659.2-201ENST00000606809 1674 ntBASIC21.09■□□□□ 0.97
BCAS3Q9H6U6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
BCAS3Q9H6U6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.08■□□□□ 0.97
BCAS3Q9H6U6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BCAS3Q9H6U6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
BCAS3Q9H6U6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
BCAS3Q9H6U6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms