Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Gm25406-201ENSMUST00000157599 105 ntBASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Gm28659-201ENSMUST00000188013 759 ntBASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Gm9172-201ENSMUST00000212092 954 ntBASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdhb2Q91Y00 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Pcdhb2Q91Y00 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb2Q91Y00 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Pcdhb2Q91Y00 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb2Q91Y00 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb2Q91Y00 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Mir8098-201ENSMUST00000184011 137 ntBASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb2Q91Y00 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Gm7506-201ENSMUST00000207758 815 ntBASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb2Q91Y00 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb2Q91Y00 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb2Q91Y00 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb2Q91Y00 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb2Q91Y00 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb2Q91Y00 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.86■□□□□ 0.29
Pcdhb2Q91Y00 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb2Q91Y00 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms